RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Cavin4A2AMM0 362 aa11.92□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Mtus1Q5HZI1 1210 aa11.92□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Apol7aB2RT54 418 aa11.92□□□□□ -0.5
Col6a3-201ENSMUST00000056925 AknaQ80VW7 1404 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Tacc3Q9JJ11 631 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Eef1dP57776 281 aaKnown RBP11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Soga3Q6NZL0 945 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Fam13aQ8BGI4 693 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Nop53Q8BK35 484 aaKnown RBP11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Ube2hP62257 183 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Rai14Q9EP71 979 aaKnown RBP11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Ppp1r9bQ6R891 817 aaKnown RBP11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Krt84Q99M73 603 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Trim11Q99PQ2 467 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Cbfa2t2O70374 594 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Specc1Q5SXY1 1067 aa11.91□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Gm3409A0A0G2JE67 319 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Lig3P97386 1015 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Washc4Q3UMB9 1173 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Iws1Q8C1D8 766 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Rufy3Q9D394 469 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Mink1Q9JM52 1308 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Psmd6Q99JI4 389 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Ano10Q8BH79 659 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Klhl10Q9D5V2 608 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Zbtb22Q9Z0G7 638 aa11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Knop1Q9Z2Q2 478 aaKnown RBP11.9□□□□□ -0.5
Col6a3-201ENSMUST00000056925 Calml4Q91WQ9 153 aa11.9□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Usp11Q99K46 921 aa11.9□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Taf7lQ9D3R9 471 aa11.9□□□□□ -0.51
Col6a3-201ENSMUST00000056925 U2af2P26369 475 aaKnown RBP11.9□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Zswim4Q8C7B8 1101 aa11.9□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Cep83Q9D5R3 692 aa11.9□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Zscan20B2KFW1 1030 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Cfap73J3QPZ5 306 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gas2l3Q3UWW6 683 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Adcy3Q8VHH7 1145 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ccdc160Q3UYG1 323 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ppip5k2Q6ZQB6 1129 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Tubb5P99024 444 aaKnown RBP11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Mxra7Q9CZH7 178 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gnl3lQ6PGG6 577 aaKnown RBP11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Xab2Q9DCD2 855 aaKnown RBP11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Sclt1G5E861 688 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Stmn1P54227 149 aaKnown RBP11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Tmc2Q8R4P4 888 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Irx4Q9QY61 515 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Erich2E9Q1A6 463 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ndufab1Q9CR21 156 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Atp1a4Q9WV27 1032 aa11.89□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Kif5cP28738 956 aaKnown RBP11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 ErmnQ5EBJ4 281 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gle1Q8R322 699 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Rsph3bQ9DA80 389 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Btn2a2A4QPC6 514 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Krt8P11679 490 aaKnown RBP11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ttll12Q3UDE2 639 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Trak2Q6P9N8 913 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Top1mtQ8R4U6 593 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ccdc97Q9DBT3 340 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Nol8Q3UHX0 1147 aaKnown RBP11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Nap1l5Q9JJF0 156 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Tmx1Q8VBT0 278 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Sh2d4bA6X942 431 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Zfyve27Q3TXX3 415 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Mindy4Q3UQI9 744 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Stim2P83093 746 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Spty2d1Q68FG3 682 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Trim6Q8BGE7 488 aa11.88□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gsto1O09131 240 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Tsg101Q61187 391 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 PpanQ91YU8 470 aaKnown RBP11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 E9QMW4 1145 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ppp2r1aQ76MZ3 589 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Cep128Q8BI22 1102 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 4930548H24RikQ9D496 437 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 VimP20152 466 aaKnown RBP11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ccdc57Q6PHN1 1016 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Arhgap24Q8C4V1 747 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ddx27Q921N6 760 aaKnown RBP11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 IkQ9Z1M8 557 aaKnown RBP11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Kdm5dQ62240 1548 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Gm28919A0A087WP35 240 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Irgm2A0A140LIF8 407 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Map3k9Q3U1V8 1077 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Hook3Q8BUK6 718 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Syt10Q9R0N4 523 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Dnajc21E9Q8D0 531 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ano2Q8CFW1 1002 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 SfpqQ8VIJ6 699 aaKnown RBP11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Arfgap2Q99K28 520 aa11.87□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Speer4aF8VPX6 267 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Pnpla2Q8BJ56 486 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Syt1P46096 421 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Spa17Q62252 149 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 EnahQ03173 802 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Ccdc70Q9D9B0 223 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Nom1Q3UFM5 854 aaKnown RBP11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 Pex19Q8VCI5 299 aa11.86□□□□□ -0.51
Col6a3-201ENSMUST00000056925 ErbinQ80TH2 1402 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms