RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Rpgrip1Q9EPQ2 1331 aa17,48■□□□□ 0,39
Col6a3-201ENSMUST00000056925 Las1lA2BE28 776 aaKnown RBP17,36■□□□□ 0,37
Col6a3-201ENSMUST00000056925 Rhox8Q6VSS7 320 aa17,33■□□□□ 0,37
Col6a3-201ENSMUST00000056925 Cngb1E1AZ71 1325 aa17,24■□□□□ 0,35
Col6a3-201ENSMUST00000056925 Pelp1Q9DBD5 1123 aaKnown RBP16,92■□□□□ 0,3
Col6a3-201ENSMUST00000056925 Amer1Q7TS75 1132 aa16,56■□□□□ 0,24
Col6a3-201ENSMUST00000056925 CenpbP27790 599 aa16,35■□□□□ 0,21
Col6a3-201ENSMUST00000056925 Ehmt2Q9Z148 1263 aaKnown RBP16,28■□□□□ 0,2
Col6a3-201ENSMUST00000056925 Myt1Q8CFC2 1127 aa16,21■□□□□ 0,19
Col6a3-201ENSMUST00000056925 Wdr66E9Q743 1299 aa16,18■□□□□ 0,18
Col6a3-201ENSMUST00000056925 Zeb1Q64318 1117 aa16,02■□□□□ 0,15
Col6a3-201ENSMUST00000056925 4930567H17RikQ3V0K5 233 aa15,99■□□□□ 0,15
Col6a3-201ENSMUST00000056925 Ttbk1Q6PCN3 1308 aa15,89■□□□□ 0,13
Col6a3-201ENSMUST00000056925 DiexfQ8BTT6 772 aaKnown RBP15,78■□□□□ 0,12
Col6a3-201ENSMUST00000056925 Acin1Q9JIX8 1338 aaKnown RBP15,66■□□□□ 0,1
Col6a3-201ENSMUST00000056925 4933416C03RikQ3V063 378 aa15,56■□□□□ 0,08
Col6a3-201ENSMUST00000056925 Stra8P70278 393 aa15,54■□□□□ 0,08
Col6a3-201ENSMUST00000056925 Ube2uB1AUC4 352 aa15,5■□□□□ 0,07
Col6a3-201ENSMUST00000056925 Rtl1Q7M732 1744 aa15,36■□□□□ 0,05
Col6a3-201ENSMUST00000056925 Rtl5Q5DTT4 599 aa15,31■□□□□ 0,04
Col6a3-201ENSMUST00000056925 NefmP08553 848 aa15,31■□□□□ 0,04
Col6a3-201ENSMUST00000056925 Pcgf6Q99NA9 353 aa15,29■□□□□ 0,04
Col6a3-201ENSMUST00000056925 Cdk11bP24788 784 aaKnown RBP15,27■□□□□ 0,03
Col6a3-201ENSMUST00000056925 Tnnt3Q9QZ47 272 aa15,24■□□□□ 0,03
Col6a3-201ENSMUST00000056925 Ccdc180J3QNE4 1664 aa15,22■□□□□ 0,03
Col6a3-201ENSMUST00000056925 Ccdc136Q3TVA9 1136 aa15,2■□□□□ 0,02
Col6a3-201ENSMUST00000056925 Slc24a1Q91WD8 1130 aa15,17■□□□□ 0,02
Col6a3-201ENSMUST00000056925 Gab3Q8BSM5 595 aa15,14■□□□□ 0,01
Col6a3-201ENSMUST00000056925 Esf1Q3V1V3 845 aaKnown RBP15,1■□□□□ 0,01
Col6a3-201ENSMUST00000056925 Ythdc1E9Q5K9 736 aaKnown RBP15,03■□□□□ -0
Col6a3-201ENSMUST00000056925 Npm2Q80W85 207 aa15,02□□□□□ -0,01
Col6a3-201ENSMUST00000056925 Nop58Q6DFW4 536 aaKnown RBP15□□□□□ -0,01
Col6a3-201ENSMUST00000056925 NeflP08551 543 aa14,99□□□□□ -0,01
Col6a3-201ENSMUST00000056925 Myt1lP97500 1187 aa14,94□□□□□ -0,02
Col6a3-201ENSMUST00000056925 HrcG5E8J6 738 aa14,93□□□□□ -0,02
Col6a3-201ENSMUST00000056925 Trim41Q5NCC3 630 aa14,92□□□□□ -0,02
Col6a3-201ENSMUST00000056925 UbtfP25976 765 aaKnown RBP14,88□□□□□ -0,03
Col6a3-201ENSMUST00000056925 Supt5hO55201 1082 aaKnown RBP14,85□□□□□ -0,03
Col6a3-201ENSMUST00000056925 DaxxO35613 739 aa14,82□□□□□ -0,04
Col6a3-201ENSMUST00000056925 Anp32aO35381 247 aa14,8□□□□□ -0,04
Col6a3-201ENSMUST00000056925 NrdcQ8BHG1 1161 aa14,8□□□□□ -0,04
Col6a3-201ENSMUST00000056925 Eif5bQ05D44 1216 aaKnown RBP14,77□□□□□ -0,05
Col6a3-201ENSMUST00000056925 Anp32bQ9EST5 272 aaKnown RBP14,69□□□□□ -0,06
Col6a3-201ENSMUST00000056925 CatipB9EKE5 520 aa14,6□□□□□ -0,07
Col6a3-201ENSMUST00000056925 NclP09405 707 aaKnown RBP14,57□□□□□ -0,08
Col6a3-201ENSMUST00000056925 Csrnp3P59055 597 aa14,54□□□□□ -0,08
Col6a3-201ENSMUST00000056925 Ccdc9Q8VC31 543 aaKnown RBP14,54□□□□□ -0,08
Col6a3-201ENSMUST00000056925 Aplp2Q06335 707 aa14,53□□□□□ -0,08
Col6a3-201ENSMUST00000056925 Neurod1Q60867 357 aa14,52□□□□□ -0,08
Col6a3-201ENSMUST00000056925 NischQ80TM9 1593 aa14,48□□□□□ -0,09
Col6a3-201ENSMUST00000056925 Gm38655A0A286YDK6 273 aa14,48□□□□□ -0,09
Col6a3-201ENSMUST00000056925 Ppargc1bQ8VHJ7 1014 aa14,46□□□□□ -0,09
Col6a3-201ENSMUST00000056925 Bcl11aQ9QYE3 773 aa14,46□□□□□ -0,09
Col6a3-201ENSMUST00000056925 TonslQ6NZL6 1363 aa14,44□□□□□ -0,1
Col6a3-201ENSMUST00000056925 Anks4bQ8K3X6 423 aa14,43□□□□□ -0,1
Col6a3-201ENSMUST00000056925 ClspnQ80YR7 1315 aa14,39□□□□□ -0,11
Col6a3-201ENSMUST00000056925 Lmod3E9QA62 571 aa14,36□□□□□ -0,11
Col6a3-201ENSMUST00000056925 Fam50aQ9WV03 339 aaKnown RBP14,34□□□□□ -0,11
Col6a3-201ENSMUST00000056925 Hsp90aa1P07901 733 aaKnown RBP14,32□□□□□ -0,12
Col6a3-201ENSMUST00000056925 Upf2A2AT37 1269 aaKnown RBP14,28□□□□□ -0,12
Col6a3-201ENSMUST00000056925 Os9Q8K2C7 672 aa14,2□□□□□ -0,14
Col6a3-201ENSMUST00000056925 ArxO35085 564 aa14,18□□□□□ -0,14
Col6a3-201ENSMUST00000056925 Mier1Q5UAK0 511 aa14,15□□□□□ -0,14
Col6a3-201ENSMUST00000056925 1700123L14RikQ3V2K7 440 aa14,11□□□□□ -0,15
Col6a3-201ENSMUST00000056925 Tnnt2P50752 301 aa14,1□□□□□ -0,15
Col6a3-201ENSMUST00000056925 Calr4Q3TQS0 420 aa14,09□□□□□ -0,15
Col6a3-201ENSMUST00000056925 Ppp4r2Q0VGB7 417 aa14,07□□□□□ -0,16
Col6a3-201ENSMUST00000056925 Trim44Q9QXA7 346 aa14,07□□□□□ -0,16
Col6a3-201ENSMUST00000056925 Ap3b1Q9Z1T1 1105 aa14,06□□□□□ -0,16
Col6a3-201ENSMUST00000056925 Irx3P81067 507 aa14,06□□□□□ -0,16
Col6a3-201ENSMUST00000056925 DekQ7TNV0 380 aaKnown RBP14,05□□□□□ -0,16
Col6a3-201ENSMUST00000056925 Fam71e1A1L3C1 212 aa14,04□□□□□ -0,16
Col6a3-201ENSMUST00000056925 Ccdc27Q3V036 639 aa14,02□□□□□ -0,16
Col6a3-201ENSMUST00000056925 Wdr43Q6ZQL4 677 aaKnown RBP14□□□□□ -0,17
Col6a3-201ENSMUST00000056925 Mapk8ip2Q9ERE9 830 aa13,99□□□□□ -0,17
Col6a3-201ENSMUST00000056925 Sall2Q9QX96 1004 aa13,92□□□□□ -0,18
Col6a3-201ENSMUST00000056925 Il27Q8K3I6 234 aa13,92□□□□□ -0,18
Col6a3-201ENSMUST00000056925 Pknox2Q8BG99 474 aa13,9□□□□□ -0,18
Col6a3-201ENSMUST00000056925 Nlrp6Q91WS2 869 aa13,9□□□□□ -0,18
Col6a3-201ENSMUST00000056925 Vsig10D3YX43 558 aa13,9□□□□□ -0,18
Col6a3-201ENSMUST00000056925 Polr3glQ8R0C0 218 aa13,87□□□□□ -0,19
Col6a3-201ENSMUST00000056925 CanxP35564 591 aaKnown RBP13,87□□□□□ -0,19
Col6a3-201ENSMUST00000056925 Znf326O88291 580 aa13,83□□□□□ -0,2
Col6a3-201ENSMUST00000056925 Dcaf1Q80TR8 1506 aa13,83□□□□□ -0,2
Col6a3-201ENSMUST00000056925 Adam1bQ8R534 806 aa13,82□□□□□ -0,2
Col6a3-201ENSMUST00000056925 Znf316Q6PGE4 1016 aa13,82□□□□□ -0,2
Col6a3-201ENSMUST00000056925 PtmaP26350 111 aa13,82□□□□□ -0,2
Col6a3-201ENSMUST00000056925 Htatsf1Q8BGC0 757 aa13,79□□□□□ -0,2
Col6a3-201ENSMUST00000056925 Hsp90ab1P11499 724 aaKnown RBP13,78□□□□□ -0,2
Col6a3-201ENSMUST00000056925 Zbtb7cQ8VCZ7 619 aa13,77□□□□□ -0,21
Col6a3-201ENSMUST00000056925 Taok2Q6ZQ29 1240 aa13,76□□□□□ -0,21
Col6a3-201ENSMUST00000056925 AU015836B2RUM3 263 aa13,75□□□□□ -0,21
Col6a3-201ENSMUST00000056925 Zcchc6Q5BLK4 1491 aaKnown RBP13,75□□□□□ -0,21
Col6a3-201ENSMUST00000056925 Podxl2Q8CAE9 603 aa13,73□□□□□ -0,21
Col6a3-201ENSMUST00000056925 Plekhg3Q4VAC9 1341 aa13,69□□□□□ -0,22
Col6a3-201ENSMUST00000056925 Zbtb4Q5F293 982 aa13,66□□□□□ -0,22
Col6a3-201ENSMUST00000056925 Gtf3c3Q3TMP1 882 aa13,66□□□□□ -0,22
Col6a3-201ENSMUST00000056925 Chic1Q8CBW7 227 aa13,66□□□□□ -0,22
Col6a3-201ENSMUST00000056925 Plcb2A3KGF7 1181 aa13,66□□□□□ -0,22
Col6a3-201ENSMUST00000056925 Trim30dE9PWL0 497 aa13,65□□□□□ -0,23
Retrieved 100 of 22,080 RNA–protein pairs in 27,4 ms