RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Rcan3Q9JKK0 239 aa17.58■□□□□ 0.41
Msx3-201ENSMUST00000055353 Pof1bQ8K4L4 587 aa17.58■□□□□ 0.4
Msx3-201ENSMUST00000055353 ScaperF8VQ70 1398 aaKnown RBP17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 Fkbp4P30416 458 aa17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 Utp18Q5SSI6 552 aaKnown RBP17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 D430041D05RikF6ZGR6 1678 aa17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 Ptpn23Q6PB44 1692 aa17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 Kif4P33174 1231 aa17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 CoilQ5SU73 570 aa17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 Clcn1Q64347 994 aa17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 PtmsQ9D0J8 101 aaKnown RBP17.57■□□□□ 0.4
Msx3-201ENSMUST00000055353 Tmem94Q7TSH8 1360 aa17.56■□□□□ 0.4
Msx3-201ENSMUST00000055353 Fyb1O35601 819 aa17.56■□□□□ 0.4
Msx3-201ENSMUST00000055353 Pdia4P08003 638 aaKnown RBP17.56■□□□□ 0.4
Msx3-201ENSMUST00000055353 Anapc15P60007 132 aa17.56■□□□□ 0.4
Msx3-201ENSMUST00000055353 Chd1lQ9CXF7 900 aa17.56■□□□□ 0.4
Msx3-201ENSMUST00000055353 Dnajc5P60904 198 aa17.55■□□□□ 0.4
Msx3-201ENSMUST00000055353 Mknk2Q8CDB0 459 aa17.55■□□□□ 0.4
Msx3-201ENSMUST00000055353 Arfgef2A2A5R2 1792 aa17.55■□□□□ 0.4
Msx3-201ENSMUST00000055353 EappQ5BU09 281 aa17.55■□□□□ 0.4
Msx3-201ENSMUST00000055353 Tgfb1i1Q62219 461 aa17.55■□□□□ 0.4
Msx3-201ENSMUST00000055353 Ripk4Q9ERK0 786 aa17.55■□□□□ 0.4
Msx3-201ENSMUST00000055353 Cfdp1O88271 295 aaKnown RBP17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Pa2g4P50580 394 aaKnown RBP17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Eif4a1P60843 406 aaKnown RBP17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Bms1Q6PGF5 1284 aaKnown RBP17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Pnma3Q8JZW8 466 aa17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Babam1Q3UI43 333 aa17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Bend3Q6PAL0 825 aa17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Brf1Q8CFK2 676 aa17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Fez1Q8K0X8 392 aa17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Ccdc7Q9D541 371 aa17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 Zfp804bA0A0G2JGH6 1343 aa17.54■□□□□ 0.4
Msx3-201ENSMUST00000055353 C5P06684 1680 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Gjb2Q00977 226 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Mphosph10Q810V0 681 aaKnown RBP17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 DpydQ8CHR6 1025 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 KinQ8K339 391 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Rufy3Q9D394 469 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Atp6v1dP57746 247 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Kdm4aQ8BW72 1064 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Als2Q920R0 1651 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Mon2Q80TL7 1715 aa17.53■□□□□ 0.4
Msx3-201ENSMUST00000055353 Rad50P70388 1312 aa17.52■□□□□ 0.4
Msx3-201ENSMUST00000055353 Gzf1Q4VBD9 706 aa17.52■□□□□ 0.4
Msx3-201ENSMUST00000055353 Arap3Q8R5G7 1538 aa17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 Cnksr1A2A9K7 700 aa17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 VgfQ0VGU4 617 aa17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 Edc3Q8K2D3 508 aaKnown RBP17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 Noc3lQ8VI84 807 aaKnown RBP17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 Adamtsl3G3UXC7 1706 aa17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 BbxQ8VBW5 907 aa17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 Ccar2Q8VDP4 922 aaKnown RBP17.51■□□□□ 0.39
Msx3-201ENSMUST00000055353 Dlg5E9Q9R9 1921 aa17.5■□□□□ 0.39
Msx3-201ENSMUST00000055353 Brd2Q7JJ13 798 aaKnown RBP17.5■□□□□ 0.39
Msx3-201ENSMUST00000055353 Ints3Q7TPD0 1041 aaKnown RBP17.5■□□□□ 0.39
Msx3-201ENSMUST00000055353 Olfml1Q8BSH2 233 aa17.5■□□□□ 0.39
Msx3-201ENSMUST00000055353 Ush1cQ9ES64 910 aa17.5■□□□□ 0.39
Msx3-201ENSMUST00000055353 Adcy9P51830 1353 aa17.5■□□□□ 0.39
Msx3-201ENSMUST00000055353 Brpf1B2RRD7 1212 aa17.5■□□□□ 0.39
Msx3-201ENSMUST00000055353 Smarce1O54941 411 aaKnown RBP17.49■□□□□ 0.39
Msx3-201ENSMUST00000055353 Zbtb22Q9Z0G7 638 aa17.49■□□□□ 0.39
Msx3-201ENSMUST00000055353 Strn4P58404 760 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Pcmtd1P59913 357 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Fam228bQ497Q6 232 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Gsdma3Q5Y4Y6 464 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Btbd11Q6GQW0 1109 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Cdca7lQ922M5 438 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Tceal9Q9DD24 104 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Bach1P97302 739 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Samm50Q8BGH2 469 aa17.48■□□□□ 0.39
Msx3-201ENSMUST00000055353 Cct4P80315 539 aaKnown RBP17.47■□□□□ 0.39
Msx3-201ENSMUST00000055353 Map3k2Q61083 619 aa17.47■□□□□ 0.39
Msx3-201ENSMUST00000055353 Ddx19aQ61655 478 aaKnown RBP17.47■□□□□ 0.39
Msx3-201ENSMUST00000055353 Jarid2Q62315 1234 aa17.47■□□□□ 0.39
Msx3-201ENSMUST00000055353 Tpm2P58774 284 aa17.47■□□□□ 0.39
Msx3-201ENSMUST00000055353 Nom1Q3UFM5 854 aaKnown RBP17.47■□□□□ 0.39
Msx3-201ENSMUST00000055353 Add2Q9QYB8 725 aa17.47■□□□□ 0.39
Msx3-201ENSMUST00000055353 Ets1P27577 440 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 TatQ8QZR1 454 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Amotl1Q9D4H4 968 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Echdc1Q9D9V3 322 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Becn1O88597 448 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Syt1P46096 421 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Tti2Q8BGV4 512 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Tceanc2Q8R2M0 207 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Taf5lQ91WQ5 589 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Stx6Q9JKK1 255 aa17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Nup153E9Q3G8 1462 aaKnown RBP17.46■□□□□ 0.39
Msx3-201ENSMUST00000055353 Usp48Q3V0C5 1052 aa17.45■□□□□ 0.38
Msx3-201ENSMUST00000055353 Top1mtQ8R4U6 593 aa17.45■□□□□ 0.38
Msx3-201ENSMUST00000055353 Dnajc10Q9DC23 793 aa17.45■□□□□ 0.38
Msx3-201ENSMUST00000055353 Mindy4Q3UQI9 744 aa17.45■□□□□ 0.38
Msx3-201ENSMUST00000055353 Ano8Q6PB70 1060 aa17.45■□□□□ 0.38
Msx3-201ENSMUST00000055353 Pdcl2Q78Y63 240 aa17.45■□□□□ 0.38
Msx3-201ENSMUST00000055353 Glipr1l2Q9CQ35 332 aa17.45■□□□□ 0.38
Msx3-201ENSMUST00000055353 Mcm3P25206 812 aaKnown RBP17.44■□□□□ 0.38
Msx3-201ENSMUST00000055353 Pkp1P97350 728 aaKnown RBP17.44■□□□□ 0.38
Msx3-201ENSMUST00000055353 Ifit2Q64112 472 aa17.44■□□□□ 0.38
Msx3-201ENSMUST00000055353 Ccdc155Q80VJ8 648 aa17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms