RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Erbb4Q61527 1308 aa9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Nphp1Q9QY53 687 aa9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Crb1Q8VHS2 1405 aa9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 PsapQ61207 557 aaKnown RBP9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Nlrp9bQ66X22 1003 aa9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Mum1Q6DID5 682 aa9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Mrps27Q8BK72 415 aaKnown RBP9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Cfap44E9Q5M6 1843 aa9.87□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Tbc1d4Q8BYJ6 1307 aa9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Plppr3Q7TPB0 716 aa9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 SympkQ80X82 1284 aa9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Ccdc9Q8VC31 543 aaKnown RBP9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Eif3aP23116 1344 aaKnown RBP9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Igfbp6P47880 238 aa9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 1700010I14RikQ7TPG0 532 aa9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Cyp46a1Q9WVK8 500 aa9.86□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 FAM186AQ9D9R9 1790 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Atf3Q60765 181 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Srgap3Q812A2 1099 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 RestQ8VIG1 1082 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Myh7Q91Z83 1935 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Mst1rQ62190 1378 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Mfap1aC0HKD8 439 aaKnown RBP9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Mfap1bC0HKD9 439 aaKnown RBP9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Evi5lH3BKQ3 813 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Ms4a2P20490 235 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Q3TQI7 289 aaKnown RBP9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Trim52Q8CDV4 233 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Nek4Q9Z1J2 792 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Cdhr2E9Q7P9 1308 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Ppip5k2Q6ZQB6 1129 aa9.85□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 GnpatP98192 678 aa9.84□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 MypnQ5DTJ9 1315 aa9.84□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Tlr7P58681 1050 aa9.84□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Cct4P80315 539 aaKnown RBP9.84□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Asic4Q7TNS7 539 aa9.84□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Zkscan2G3X952 960 aa9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Anapc15P60007 132 aa9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Smarca5Q91ZW3 1051 aaKnown RBP9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Scn11aQ9R053 1765 aa9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Nsfl1cQ9CZ44 370 aaKnown RBP9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 VirmaA2AIV2 1811 aaKnown RBP9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Irf9Q61179 399 aa9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Sos2Q02384 1333 aa9.83□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Plekhd1B2RPU2 505 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Fam228bQ497Q6 232 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Unc5clQ6R653 518 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ints5Q8CHT3 1018 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 ZgpatQ8VDM1 511 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 SnrkQ8VDU5 748 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ccdc7Q9D541 371 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ddx17Q501J6 650 aaKnown RBP9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Gm21698A0A087WQP8 267 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Gm21671G3UY31 267 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ripor2Q80U16 1078 aa9.82□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 AbraQ8BUZ1 375 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 4930572O03RikQ8C5Y0 211 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Cyp27a1Q9DBG1 533 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Bcar3Q9QZK2 820 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Vwa3bJ9JI28 736 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Tgfb1i1Q62219 461 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ptpdc1Q6NZK8 747 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 AceP09470 1312 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Kcnb2A6H8H5 907 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 VgfQ0VGU4 617 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Cers3Q1A3B0 383 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Htatsf1Q8BGC0 757 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Mylk2Q8VCR8 613 aa9.81□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Tpx2A2APB8 745 aaKnown RBP9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Pibf1E9Q6K3 756 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Zap70P43404 618 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ecm2Q5FW85 670 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Map3k2Q61083 619 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Erc2Q6PH08 957 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Add2Q9QYB8 725 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 InsrrQ9WTL4 1300 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Zfyve9A2A8R0 1397 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Kcnh4A2A5F7 1018 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Fbxl16A2RT62 479 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Hsp90aa1P07901 733 aaKnown RBP9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Taf5lQ91WQ5 589 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ehd4Q9EQP2 541 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Tfip11Q9ERA6 838 aaKnown RBP9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ltn1Q6A009 1767 aa9.8□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Zkscan16A2ALW2 728 aa9.79□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Senp3Q9EP97 568 aaKnown RBP9.79□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Cwc27Q3TKY6 469 aa9.79□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Cntnap1O54991 1385 aa9.79□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Gm10471E9Q1C7 252 aa9.79□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Grm8P47743 908 aa9.79□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Bicc1Q99MQ1 977 aaKnown RBP9.79□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 1700019A02RikA0A087WPV9 146 aa9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Eif3bQ8JZQ9 803 aaKnown RBP9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Rbbp6P97868 1790 aaKnown RBP9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 PrkcshO08795 521 aa9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Col24a1Q30D77 1733 aa9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ccdc146E9Q9F7 977 aa9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 AK157302I3ITR1 129 aa9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ssc5dQ8BV57 1371 aa9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Isca1Q9D924 129 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms