RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Tns2Q8CGB6 1400 aa13.96□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Elp1Q7TT37 1333 aaKnown RBP13.95□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Atg4a-psA0A0G2JFS9 396 aa13.95□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Dmrt2Q8BG36 561 aa13.95□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Atg4aQ8C9S8 396 aa13.95□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Larp1Q6ZQ58 1072 aaKnown RBP13.94□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Pdzd9Q9D9M4 266 aa13.94□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Phkg2Q9DB30 406 aa13.94□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Cyp46a1Q9WVK8 500 aa13.94□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Foxp4Q9DBY0 795 aaKnown RBP13.94□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Chmp7Q8R1T1 451 aa13.93□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Nwd2Q6P5U7 1742 aa13.93□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Ltbp1Q8CG19 1712 aa13.93□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Casq1O09165 405 aa13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Gnai2P08752 355 aaKnown RBP13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Nkx2-3P97334 362 aa13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Isy1Q69ZQ2 285 aaKnown RBP13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Eif3bQ8JZQ9 803 aaKnown RBP13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Kcnh4A2A5F7 1018 aa13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Q3TQI7 289 aaKnown RBP13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Fam83gQ5SWY7 812 aa13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Ankrd23Q812A3 306 aa13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Dnttip2Q8R2M2 758 aaKnown RBP13.92□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Sik1Q60670 779 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Plcd4Q8K3R3 807 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Ginm1Q91WR6 327 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Abcc12Q80WJ6 1366 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Gm21663A0A0G2JE01 267 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Gm7361D3Z6R1 267 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 5031410I06RikE9Q4E0 267 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Gm1979E9QAN3 267 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Gm5862K7N5V5 267 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Gm10220K7N660 267 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Asic4Q7TNS7 539 aa13.91□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Rnf123Q5XPI3 1314 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Mst1rQ62190 1378 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Atf5O70191 283 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Exoc5Q3TPX4 708 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Slc5a1Q8C3K6 665 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Phf14Q9D4H9 881 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Nphp1Q9QY53 687 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Dlg5E9Q9R9 1921 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Stk36Q69ZM6 1316 aa13.9□□□□□ -0.18
Ddx56-201ENSMUST00000004507 Ccdc155Q80VJ8 648 aa13.89□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Zkscan2G3X952 960 aa13.89□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Ddb1Q3U1J4 1140 aaKnown RBP13.89□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Erc2Q6PH08 957 aa13.89□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Srgap3Q812A2 1099 aa13.89□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Q9D2X8 372 aa13.89□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Ppp1r42Q8R1Z4 357 aa13.88□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Ssfa2Q922B9 1252 aa13.88□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Pnpla7A2AJ88 1352 aa13.88□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Ubr2Q6WKZ8 1755 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Mmp8O70138 465 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Vps33bP59016 617 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Kif20aP97329 887 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Atp8b2P98199 1209 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Mrps27Q8BK72 415 aaKnown RBP13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Bcar3Q9QZK2 820 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Disp3A3KFU9 1347 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 AU015836B2RUM3 263 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Hoxa7P02830 229 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Btbd11Q6GQW0 1109 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Zkscan1Q8BGS3 561 aaKnown RBP13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Ipo4Q8VI75 1082 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Dmrtc1Q9D9R7 182 aa13.87□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Chpf2Q3UU43 768 aa13.86□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Cyp27a1Q9DBG1 533 aa13.86□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Irx6Q9ER75 438 aa13.86□□□□□ -0.19
Ddx56-201ENSMUST00000004507 PappaQ8R4K8 1624 aa13.86□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Bag4Q8CI61 457 aa13.85□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Bloc1s4Q8VED2 215 aa13.85□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Il4rP16382 810 aa13.85□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Fbln2P37889 1221 aa13.85□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Ptpdc1Q6NZK8 747 aa13.85□□□□□ -0.19
Ddx56-201ENSMUST00000004507 DekQ7TNV0 380 aaKnown RBP13.85□□□□□ -0.19
Ddx56-201ENSMUST00000004507 RestQ8VIG1 1082 aa13.85□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Cyp2d12Q8BVD2 504 aa13.84□□□□□ -0.19
Ddx56-201ENSMUST00000004507 ApobrQ8VBT6 942 aa13.84□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Ccnl1Q52KE7 532 aaKnown RBP13.83□□□□□ -0.19
Ddx56-201ENSMUST00000004507 Cnksr1A2A9K7 700 aa13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Zkscan16A2ALW2 728 aa13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Stk11ipQ3TAA7 1072 aa13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Cwc27Q3TKY6 469 aa13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Nol8Q3UHX0 1147 aaKnown RBP13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Amer1Q7TS75 1132 aa13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 BcorQ8CGN4 1759 aa13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Ints5Q8CHT3 1018 aa13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Noc3lQ8VI84 807 aaKnown RBP13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 PtmsQ9D0J8 101 aaKnown RBP13.83□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Mcmdc2E9Q956 681 aa13.82□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Hmox1P14901 289 aa13.82□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Tjp1P39447 1745 aaKnown RBP13.82□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Tnnt1O88346 262 aa13.82□□□□□ -0.2
Ddx56-201ENSMUST00000004507 CoilQ5SU73 570 aa13.82□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Rasa1E9PYG6 1038 aa13.81□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Crb1Q8VHS2 1405 aa13.81□□□□□ -0.2
Ddx56-201ENSMUST00000004507 MccE9PWI3 1003 aa13.8□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Eif4a1P60843 406 aaKnown RBP13.8□□□□□ -0.2
Ddx56-201ENSMUST00000004507 Taok3Q8BYC6 898 aa13.8□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms