RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Echdc1Q9D9V3 322 aa22.69■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Arhgef1Q61210 920 aaKnown RBP22.69■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Slx4ipQ9D7Y9 413 aa22.69■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Brpf1B2RRD7 1212 aa22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Zap70P43404 618 aa22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Cpa2Q504N0 417 aa22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Fez1Q8K0X8 392 aa22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Gripap1Q8VD04 806 aa22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Mlh1Q9JK91 760 aa22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Elmsan1E9Q2I4 1089 aaKnown RBP22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Ints3Q7TPD0 1041 aaKnown RBP22.68■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Sipa1l2Q80TE4 1722 aa22.67■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Adcy9P51830 1353 aa22.67■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Kdm4aQ8BW72 1064 aa22.67■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Irx6Q9ER75 438 aa22.67■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Col1a2Q01149 1372 aa22.66■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Slc4a10Q5DTL9 1118 aa22.66■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Clcn1Q64347 994 aa22.65■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Exoc6bA6H5Z3 810 aa22.65■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Pdcl2Q78Y63 240 aa22.65■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Ncoa4Q5U4H9 625 aa22.64■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Atp10bB1AWN4 1474 aa22.64■■□□□ 1.22
Shkbp1-201ENSMUST00000003857 Plppr3Q7TPB0 716 aa22.64■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 TatQ8QZR1 454 aa22.63■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Stk3Q9JI10 497 aa22.63■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Col14a1Q80X19 1797 aa22.63■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Znf692Q3U381 531 aa22.63■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Rcan3Q9JKK0 239 aa22.63■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Rimbp3Q3V0F0 1606 aa22.62■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Rbm27Q5SFM8 1060 aaKnown RBP22.62■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Tmem2Q5FWI3 1383 aa22.62■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Cfdp1O88271 295 aaKnown RBP22.62■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Nkx2-3P97334 362 aa22.62■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 E4f1Q8CCE9 783 aa22.62■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Zscan25B2RX31 543 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Fkbp4P30416 458 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Gjb2Q00977 226 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Mphosph10Q810V0 681 aaKnown RBP22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Aox2Q5SGK3 1345 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Gli3Q61602 1583 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Btbd11Q6GQW0 1109 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Brf1Q8CFK2 676 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Ccar2Q8VDP4 922 aaKnown RBP22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Add2Q9QYB8 725 aa22.61■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Tpm2P58774 284 aa22.6■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Abcc4E9Q236 1325 aa22.6■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Tgfb1i1Q62219 461 aa22.6■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Rnf214Q8BFU3 668 aaKnown RBP22.6■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Tceal9Q9DD24 104 aa22.6■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Flt4P35917 1363 aa22.6■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Bcl9Q9D219 1425 aa22.59■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Siglec1Q62230 1695 aa22.59■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Gimap6Q8K349 305 aa22.59■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Rufy3Q9D394 469 aa22.59■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Ush1cQ9ES64 910 aa22.59■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Zfp804bA0A0G2JGH6 1343 aa22.58■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Map3k13Q1HKZ5 959 aa22.58■■□□□ 1.21
Shkbp1-201ENSMUST00000003857 Fam228bQ497Q6 232 aa22.57■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Ppp1r37Q8BKR5 712 aa22.57■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 EspnlQ3UYR4 1005 aa22.57■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Pof1bQ8K4L4 587 aa22.57■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Top1mtQ8R4U6 593 aa22.57■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Ppfia1B2RXQ2 1266 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 VgfQ0VGU4 617 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Kcnh5Q920E3 988 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Wdr93Q402B2 695 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Map3k2Q61083 619 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 PsapQ61207 557 aaKnown RBP22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Tbc1d30Q69ZT9 766 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Pknox2Q8BG99 474 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Tmem119Q8R138 280 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Taf5lQ91WQ5 589 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Dnajc10Q9DC23 793 aa22.56■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Nphp3Q7TNH6 1325 aa22.55■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Nol12Q8BG17 217 aa22.55■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 GphnQ8BUV3 769 aaKnown RBP22.55■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Eif3aP23116 1344 aaKnown RBP22.55■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 TimelessQ9R1X4 1197 aa22.55■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Pank2Q3U4S0 443 aa22.54■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Becn1O88597 448 aa22.54■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Bms1Q6PGF5 1284 aaKnown RBP22.54■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Tti2Q8BGV4 512 aa22.54■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Erbb4Q61527 1308 aa22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Syt1P46096 421 aa22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Pa2g4P50580 394 aaKnown RBP22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Stx6Q9JKK1 255 aa22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Thsd7aQ69ZU6 1645 aa22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Ifit2Q64112 472 aa22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 GckrQ91X44 587 aa22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Chd1lQ9CXF7 900 aa22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Kiaa0232Q80U59 1396 aaKnown RBP22.53■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Tns3Q5SSZ5 1440 aa22.52■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Fmnl2A2APV2 1086 aa22.52■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 HellsQ60848 821 aa22.52■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 Pnma3Q8JZW8 466 aa22.52■■□□□ 1.2
Shkbp1-201ENSMUST00000003857 1700006A11RikB9EHI3 544 aa22.52■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Bcl2l13P59017 434 aa22.52■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Zbtb3Q91X45 518 aa22.52■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Smc3Q9CW03 1217 aaKnown RBP22.52■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Pde3bQ61409 1100 aa22.51■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms