RNA–Protein interactions for RNA: ENSMUST00000000619.7

Clcn4-201, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clcn4, Length 4,607 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-201ENSMUST00000000619 Nup88Q8CEC0 753 aaKnown RBP13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Ppfia1B2RXQ2 1266 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 F2rP30558 430 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Tubgcp6G5E8P0 1769 aa13.37□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Znf335A2A5K6 1337 aa13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Pdzrn3Q69ZS0 1063 aa13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Stard3nlQ9DCI3 235 aa13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Hnrnpul1Q8VDM6 859 aaKnown RBP13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 GckrQ91X44 587 aa13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Tpd52l1O54818 204 aa13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Stk36Q69ZM6 1316 aa13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Cep57l1Q8VDS7 400 aa13.36□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Polr3dQ91WD1 398 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 FancaQ9JL70 1439 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Fam184aE9PW83 1143 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Pdia4P08003 638 aaKnown RBP13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Tceanc2Q8R2M0 207 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Topbp1Q6ZQF0 1515 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Irgm2A0A140LIF8 407 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Fkbp5Q64378 456 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Hook1Q8BIL5 728 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Nol11Q8BJW5 723 aaKnown RBP13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Mlh1Q9JK91 760 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Nrxn1Q9CS84 1514 aa13.35□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Zbtb45Q52KG4 520 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Ccdc66Q6NS45 935 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Ppp6r1Q7TSI3 856 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 TnmdQ9EP64 317 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Akap12Q9WTQ5 1684 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm45015A0A140LII9 184 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm18336A0A140LIU8 765 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 EappQ5BU09 281 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Dzip1Q8BMD2 852 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Sirt1Q923E4 737 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Lmbr1lQ9D1E5 489 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 4930572O03RikQ8C5Y0 211 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Ccdc178Q8CDV0 866 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Hmgn5Q9JL35 406 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Krt85Q9Z2T6 507 aa13.34□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Gm21680A0A0G2JGR8 267 aa13.33□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Pip4k2bQ80XI4 416 aa13.33□□□□□ -0.27
Clcn4-201ENSMUST00000000619 DnmbpQ6TXD4 1580 aa13.33□□□□□ -0.27
Clcn4-201ENSMUST00000000619 Kiaa0556Q8C753 1610 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Pmfbp1Q9WVQ0 1022 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Disp3A3KFU9 1347 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Jarid2Q62315 1234 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Bms1Q6PGF5 1284 aaKnown RBP13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Dixdc1Q80Y83 711 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Gpatch3Q8BIY1 525 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Foxp4Q9DBY0 795 aaKnown RBP13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Mctp1E9PV86 951 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Grm8P47743 908 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Soga3Q6NZL0 945 aa13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Rrs1Q9CYH6 365 aaKnown RBP13.33□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ehbp1l1Q99MS7 1716 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Fndc1E9Q043 1732 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 PtprmP28828 1452 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Cdk5rap2Q8K389 1822 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Flad1Q8R123 492 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Pdlim2Q8R1G6 349 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Tubb6Q922F4 447 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 RereQ80TZ9 1558 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Rbm8a2A0A0N4SUH6 174 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Srek1Q8BZX4 494 aaKnown RBP13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ttc19Q8CC21 365 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Rbm8aQ9CWZ3 174 aa13.32□□□□□ -0.28
Clcn4-201ENSMUST00000000619 PtpruB1AUH1 1446 aa13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Cfap99A0A140LIX9 648 aa13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Tnnt2P50752 301 aa13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Zbtb3Q91X45 518 aa13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ube2hP62257 183 aa13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Eif3bQ8JZQ9 803 aaKnown RBP13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Bicc1Q99MQ1 977 aaKnown RBP13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Chd1lQ9CXF7 900 aa13.31□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Cplx1P63040 134 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Utp18Q5SSI6 552 aaKnown RBP13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Slc35g1Q8BY79 368 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ubxn4Q8VCH8 506 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Taf7Q9R1C0 341 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Farp2Q91VS8 1065 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Smg7Q5RJH6 1138 aaKnown RBP13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Fsd1Q7TPM6 496 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Atf7Q8R0S1 413 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Cnksr1A2A9K7 700 aa13.3□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Syt1P46096 421 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Eif4a1P60843 406 aaKnown RBP13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Cplx2P84086 134 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ifit2Q64112 472 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Tti2Q8BGV4 512 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 ZwintQ9CQU5 252 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ttc37F8VPK0 1563 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Q8BT18 775 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ccdc47Q9D024 483 aaKnown RBP13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Ercc6l2Q9JIM3 1537 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Atf5O70191 283 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Kif3aP28741 701 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Mical1Q8VDP3 1048 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Erc1Q99MI1 1120 aa13.29□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Dhx16G3X8X0 1044 aaKnown RBP13.28□□□□□ -0.28
Clcn4-201ENSMUST00000000619 Tlr7P58681 1050 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms