RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TMEM202A6NGA9 273 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 TMEM229AB2RXF0 380 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 ADORA3P0DMS8 318 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 HLA-EP13747 358 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 FEN1P39748 380 aaKnown RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 TUBA1BP68363 451 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 SPIBQ01892 262 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 SMARCB1Q12824 385 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 DGKKQ5KSL6 1271 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 USP43Q70EL4 1123 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 TUBA1AQ71U36 451 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 OR8H2Q8N162 312 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 CMTM7Q96FZ5 175 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 HRASLS5Q96KN8 279 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 SAMD11Q96NU1 681 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 CLSTN3Q9BQT9 956 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 TSEN34Q9BSV6 310 aaKnown RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 NUAK2Q9H093 628 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 EHD3Q9NZN3 535 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 AP3M1Q9Y2T2 418 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 E7EQ34 232 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 KMOO15229 486 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 RPLP0P05388 317 aaKnown RBP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 HMGA1P17096 107 aaKnown RBP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 GPX2P18283 190 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 IL1RNP18510 177 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 PPIGQ13427 754 aaKnown RBP eCLIP13.71□□□□□ -0.212e-7■■□□□ 12.9
ERCC3-203ENST00000445889 TTLL9Q3SXZ7 439 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 INO80DQ53TQ3 878 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 ZMAT1Q5H9K5 638 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 THOC7Q6I9Y2 204 aaKnown RBP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 FAHD1Q6P587 224 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 CRTC1Q6UUV9 634 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 DNAJC22Q8N4W6 341 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 C1orf52Q8N6N3 182 aaKnown RBP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 TESCQ96BS2 214 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 IL4I1Q96RQ9 567 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 CCM2Q9BSQ5 444 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 SYT17Q9BSW7 474 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 TRIM39Q9HCM9 518 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 NDUFAF4Q9P032 175 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 SPASTQ9UBP0 616 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 PCDHGB6Q9Y5F9 930 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 CHD5Q8TDI0 1954 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 TRPM7Q96QT4 1865 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 VCANP13611 3396 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 PRAMEF25A6NGN4 478 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 RFXAPO00287 272 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 PCDH17O14917 1159 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 TFECO14948 347 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 SEPT4O43236 478 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 KRT8P05787 483 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 CKMT1AP12532 417 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 RPS3P23396 243 aaKnown RBP eCLIP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 SPAM1P38567 509 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 MC1RQ01726 317 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 EXOC3L2Q2M3D2 409 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 POM121L1PQ3SYA9 428 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 MACC1Q6ZN28 852 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 BCDIN3DQ7Z5W3 292 aaKnown RBP13.71□□□□□ -0.21
ERCC3-203ENST00000445889 KIAA1958Q8N8K9 716 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 OR10G2Q8NGC3 310 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 SIGLEC11Q96RL6 698 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 ZIC5Q96T25 663 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 TCF25Q9BQ70 676 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 HTATIP2Q9BUP3 242 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 DUSP26Q9BV47 211 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 CEP44Q9C0F1 390 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 ZNF226Q9NYT6 803 aa13.71□□□□□ -0.21
ERCC3-203ENST00000445889 GNG14A0A1W2PPG7 69 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 SAGE2PA6NJ88 616 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 CLCA1A8K7I4 914 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 TMEM189-UBE2V1I3L0A0 370 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 TAF4O00268 1085 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 WWP2O00308 870 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 KIAA0513O60268 411 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 MED26O95402 600 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 KRT75O95678 551 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 SEMG1P04279 462 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 IGFBP1P08833 259 aaPredicted RBP13.7□□□□□ -0.22
ERCC3-203ENST00000445889 PRPS1L1P21108 318 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 PIK3CBP42338 1070 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 ITGA1P56199 1179 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 RACK1P63244 317 aaKnown RBP13.7□□□□□ -0.22
ERCC3-203ENST00000445889 CDKN3Q16667 212 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 LEXMQ3ZCV2 418 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 MFSD14CQ5VZR4 134 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 SLC46A3Q7Z3Q1 461 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 ZNF605Q86T29 641 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 UPF1Q92900 1129 aaKnown RBP eCLIP13.7□□□□□ -0.22
ERCC3-203ENST00000445889 EMILIN2Q9BXX0 1053 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 KCTD5Q9NXV2 234 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 LYVE1Q9Y5Y7 322 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 PNMA8CA0A1B0GUJ8 204 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 TBKBP1A7MCY6 615 aa13.7□□□□□ -0.22
ERCC3-203ENST00000445889 PDZK1P1A8MUH7 402 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms