RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Yif1bQ9CX30 311 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Rpl4Q9D8E6 419 aaKnown RBP10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Il1rl2Q9ERS7 574 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Rcan2Q9JHG2 197 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Cdc20Q9JJ66 499 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Ing1Q9QXV3 279 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Khdrbs3Q9R226 346 aaKnown RBP10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Zfp600A2A7V0 737 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Prrg1A2BFE8 218 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Fam46dB1ATX6 390 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Crisp4E9PVG4 293 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Vmn1r184E9Q2N4 314 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Foxd2O35392 492 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Scrg1O88745 98 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Alox5P48999 674 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Btbd3P58545 530 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Kcna7Q17ST2 489 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Naf1Q3UMQ8 489 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Q3UST5 385 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Itga7Q61738 1179 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Myl12aQ6ZWQ9 172 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Olfr503Q7TRU8 323 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Aoc2Q812C9 757 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 H2-M10.2Q85ZW9 329 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Cstf2Q8BIQ5 580 aaKnown RBP10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Samd3Q8C4H2 520 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Vmn1r188Q8K3N2 308 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Ndufs1Q91VD9 727 aaKnown RBP10□□□□□ -0.81
Clip3-201ENSMUST00000014065 L2hgdhQ91YP0 464 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 MlycdQ99J39 492 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Cstf3Q99LI7 717 aaKnown RBP10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Desi1Q9CQT7 168 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Tmem269Q9D4Y8 254 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Q9DAY5 185 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Fam122aQ9DB52 284 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Rab13Q9DD03 202 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Clca3a1Q9QX15 902 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Asb4Q9WV71 426 aa10□□□□□ -0.81
Clip3-201ENSMUST00000014065 Btnl4A2CG29 586 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Esp18A8R0V1 91 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 AF366264G3X9P9 502 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Olfr171G5E8J1 314 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Oaz2O08608 189 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Ikzf3O08900 507 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Slc32a1O35633 525 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 TP20293 436 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Sqstm1Q64337 442 aaKnown RBP9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 CilpQ66K08 1184 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Ccdc85bQ6PDY0 202 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Adamtsl4Q80T21 1036 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Ubash3bQ8BGG7 638 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Smad3Q8BUN5 425 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 LdahQ8BVA5 326 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Vmn1r203Q8R273 311 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Olfr561Q8VGZ6 314 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Pdzd3Q99MJ6 498 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Tcam1Q99NB3 548 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Smurf1Q9CUN6 731 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Pfdn1Q9CWM4 122 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Nudt14Q9D142 222 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Olfr704Q9EPF6 315 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Xylt2Q9EPL0 865 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Myg1Q9JK81 380 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Kcne5Q9QZ26 143 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Stau1Q9Z108 487 aaKnown RBP9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Fam43bA2AM80 330 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 4930402K13RikB1AW18 415 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Trim12cD3Z3L3 497 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Gm10800D3Z496 220 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Vmn1r31L7N2F1 303 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Hnf1bP27889 558 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 CskP41241 450 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Neurog1P70660 244 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 MarcoQ60754 518 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Defb14Q7TNV9 67 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 SgtaQ8BJU0 315 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Utp4Q8R2N2 686 aaKnown RBP9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Fis1Q9CQ92 152 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Moxd1Q9CXI3 613 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Mau2Q9D2X5 619 aaKnown RBP9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Zfp84Q9D654 559 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Smg9Q9DB90 520 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Fbxo8Q9QZN3 319 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Tyk2Q9R117 1184 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Kat6aQ8BZ21 2003 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Igkv10-96A0A140T8M1 115 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Slfn3A0A1L1STQ7 640 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 PpigA2AR02 752 aaKnown RBP9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Olfr1040A2ARY1 313 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Gm4969D3YZT1 566 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Ddx43D3Z6P9 646 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Vmn2r85G3UW56 850 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Vmn2r10K7N621 847 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Vmn2r92L7N2A4 860 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Gm17174M0QWQ9 212 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Gfra2O08842 464 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Dnajb5O89114 348 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Gbx2P48031 348 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Epb42P49222 691 aa9.99□□□□□ -0.81
Clip3-201ENSMUST00000014065 Mapk1P63085 358 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms