Protein–RNA interactions for Protein: Q8K3N2

Vmn1r188, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r188Q8K3N2 Gm25239-201ENSMUST00000174915 86 ntBASIC39.39■■■■□ 3.9
Vmn1r188Q8K3N2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
Vmn1r188Q8K3N2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Vmn1r188Q8K3N2 Gm15042-201ENSMUST00000120212 883 ntBASIC34.57■■■■□ 3.12
Vmn1r188Q8K3N2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Vmn1r188Q8K3N2 Gm24109-201ENSMUST00000175489 103 ntBASIC34.07■■■■□ 3.04
Vmn1r188Q8K3N2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Vmn1r188Q8K3N2 Gm15045-201ENSMUST00000117359 883 ntBASIC33.84■■■■□ 3.01
Vmn1r188Q8K3N2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Vmn1r188Q8K3N2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.95
Vmn1r188Q8K3N2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Vmn1r188Q8K3N2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Vmn1r188Q8K3N2 Gm23366-201ENSMUST00000175022 89 ntBASIC32.92■■■□□ 2.86
Vmn1r188Q8K3N2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Vmn1r188Q8K3N2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Vmn1r188Q8K3N2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.31■■■□□ 2.76
Vmn1r188Q8K3N2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Vmn1r188Q8K3N2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Vmn1r188Q8K3N2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Vmn1r188Q8K3N2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Vmn1r188Q8K3N2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Vmn1r188Q8K3N2 Psd-208ENSMUST00000224556 2034 ntBASIC31.87■■■□□ 2.69
Vmn1r188Q8K3N2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Vmn1r188Q8K3N2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Vmn1r188Q8K3N2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
Vmn1r188Q8K3N2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Vmn1r188Q8K3N2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.71■■■□□ 2.67
Vmn1r188Q8K3N2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.6■■■□□ 2.65
Vmn1r188Q8K3N2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.54■■■□□ 2.64
Vmn1r188Q8K3N2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Vmn1r188Q8K3N2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
Vmn1r188Q8K3N2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Vmn1r188Q8K3N2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Vmn1r188Q8K3N2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Vmn1r188Q8K3N2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.07■■■□□ 2.56
Vmn1r188Q8K3N2 Gm25238-201ENSMUST00000174914 89 ntBASIC31.05■■■□□ 2.56
Vmn1r188Q8K3N2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31■■■□□ 2.55
Vmn1r188Q8K3N2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Vmn1r188Q8K3N2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Vmn1r188Q8K3N2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Vmn1r188Q8K3N2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Vmn1r188Q8K3N2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Vmn1r188Q8K3N2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Vmn1r188Q8K3N2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.49■■■□□ 2.47
Vmn1r188Q8K3N2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
Vmn1r188Q8K3N2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Vmn1r188Q8K3N2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Vmn1r188Q8K3N2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.39■■■□□ 2.46
Vmn1r188Q8K3N2 Gm27325-201ENSMUST00000175467 74 ntBASIC30.33■■■□□ 2.45
Vmn1r188Q8K3N2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Vmn1r188Q8K3N2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.24■■■□□ 2.43
Vmn1r188Q8K3N2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Vmn1r188Q8K3N2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.13■■■□□ 2.41
Vmn1r188Q8K3N2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Vmn1r188Q8K3N2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Vmn1r188Q8K3N2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
Vmn1r188Q8K3N2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.01■■■□□ 2.39
Vmn1r188Q8K3N2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30■■■□□ 2.39
Vmn1r188Q8K3N2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.99■■■□□ 2.39
Vmn1r188Q8K3N2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Vmn1r188Q8K3N2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.81■■■□□ 2.36
Vmn1r188Q8K3N2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Vmn1r188Q8K3N2 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.75■■■□□ 2.35
Vmn1r188Q8K3N2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Vmn1r188Q8K3N2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Vmn1r188Q8K3N2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Vmn1r188Q8K3N2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Vmn1r188Q8K3N2 Rab21-202ENSMUST00000218831 843 ntBASIC29.68■■■□□ 2.34
Vmn1r188Q8K3N2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Vmn1r188Q8K3N2 Gm25262-201ENSMUST00000174934 133 ntBASIC29.66■■■□□ 2.34
Vmn1r188Q8K3N2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Vmn1r188Q8K3N2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Vmn1r188Q8K3N2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Vmn1r188Q8K3N2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Vmn1r188Q8K3N2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.56■■■□□ 2.32
Vmn1r188Q8K3N2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Vmn1r188Q8K3N2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.52■■■□□ 2.32
Vmn1r188Q8K3N2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Vmn1r188Q8K3N2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Vmn1r188Q8K3N2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Vmn1r188Q8K3N2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.41■■■□□ 2.3
Vmn1r188Q8K3N2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Vmn1r188Q8K3N2 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.35■■■□□ 2.29
Vmn1r188Q8K3N2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Vmn1r188Q8K3N2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.27■■■□□ 2.28
Vmn1r188Q8K3N2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Vmn1r188Q8K3N2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Vmn1r188Q8K3N2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Vmn1r188Q8K3N2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.18■■■□□ 2.26
Vmn1r188Q8K3N2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.17■■■□□ 2.26
Vmn1r188Q8K3N2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Vmn1r188Q8K3N2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Vmn1r188Q8K3N2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Vmn1r188Q8K3N2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Vmn1r188Q8K3N2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.04■■■□□ 2.24
Vmn1r188Q8K3N2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Vmn1r188Q8K3N2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Vmn1r188Q8K3N2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.91■■■□□ 2.22
Vmn1r188Q8K3N2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.9■■■□□ 2.22
Vmn1r188Q8K3N2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms