Protein–RNA interactions for Protein: A0A1L1STQ7

Slfn3, Schlafen 3, mousemouse

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slfn3A0A1L1STQ7 Gm25239-201ENSMUST00000174915 86 ntBASIC36.84■■■■□ 3.49
Slfn3A0A1L1STQ7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Slfn3A0A1L1STQ7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Slfn3A0A1L1STQ7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Slfn3A0A1L1STQ7 Gm15042-201ENSMUST00000120212 883 ntBASIC32.52■■■□□ 2.8
Slfn3A0A1L1STQ7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Slfn3A0A1L1STQ7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Slfn3A0A1L1STQ7 Gm15045-201ENSMUST00000117359 883 ntBASIC31.77■■■□□ 2.68
Slfn3A0A1L1STQ7 Gm24109-201ENSMUST00000175489 103 ntBASIC31.74■■■□□ 2.67
Slfn3A0A1L1STQ7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slfn3A0A1L1STQ7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slfn3A0A1L1STQ7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Slfn3A0A1L1STQ7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Slfn3A0A1L1STQ7 Gm23366-201ENSMUST00000175022 89 ntBASIC30.9■■■□□ 2.54
Slfn3A0A1L1STQ7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Slfn3A0A1L1STQ7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.55■■■□□ 2.48
Slfn3A0A1L1STQ7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Slfn3A0A1L1STQ7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Slfn3A0A1L1STQ7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Slfn3A0A1L1STQ7 Psd-208ENSMUST00000224556 2034 ntBASIC30.26■■■□□ 2.43
Slfn3A0A1L1STQ7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Slfn3A0A1L1STQ7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Slfn3A0A1L1STQ7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30■■■□□ 2.39
Slfn3A0A1L1STQ7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Slfn3A0A1L1STQ7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
Slfn3A0A1L1STQ7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Slfn3A0A1L1STQ7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.87■■■□□ 2.37
Slfn3A0A1L1STQ7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.81■■■□□ 2.36
Slfn3A0A1L1STQ7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Slfn3A0A1L1STQ7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Slfn3A0A1L1STQ7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Slfn3A0A1L1STQ7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.46■■■□□ 2.31
Slfn3A0A1L1STQ7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Slfn3A0A1L1STQ7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.34■■■□□ 2.29
Slfn3A0A1L1STQ7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
Slfn3A0A1L1STQ7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Slfn3A0A1L1STQ7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Slfn3A0A1L1STQ7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Slfn3A0A1L1STQ7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.05■■■□□ 2.24
Slfn3A0A1L1STQ7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Slfn3A0A1L1STQ7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Slfn3A0A1L1STQ7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29■■■□□ 2.23
Slfn3A0A1L1STQ7 Gm25238-201ENSMUST00000174914 89 ntBASIC28.94■■■□□ 2.22
Slfn3A0A1L1STQ7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Slfn3A0A1L1STQ7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Slfn3A0A1L1STQ7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Slfn3A0A1L1STQ7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Slfn3A0A1L1STQ7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Slfn3A0A1L1STQ7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Slfn3A0A1L1STQ7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Slfn3A0A1L1STQ7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
Slfn3A0A1L1STQ7 Gm27325-201ENSMUST00000175467 74 ntBASIC28.54■■■□□ 2.16
Slfn3A0A1L1STQ7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.53■■■□□ 2.16
Slfn3A0A1L1STQ7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.53■■■□□ 2.16
Slfn3A0A1L1STQ7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Slfn3A0A1L1STQ7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Slfn3A0A1L1STQ7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Slfn3A0A1L1STQ7 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.34■■■□□ 2.13
Slfn3A0A1L1STQ7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.31■■■□□ 2.12
Slfn3A0A1L1STQ7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.27■■■□□ 2.12
Slfn3A0A1L1STQ7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Slfn3A0A1L1STQ7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Slfn3A0A1L1STQ7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.19■■■□□ 2.1
Slfn3A0A1L1STQ7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Slfn3A0A1L1STQ7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
Slfn3A0A1L1STQ7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Slfn3A0A1L1STQ7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Slfn3A0A1L1STQ7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Slfn3A0A1L1STQ7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Slfn3A0A1L1STQ7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Slfn3A0A1L1STQ7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Slfn3A0A1L1STQ7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
Slfn3A0A1L1STQ7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Slfn3A0A1L1STQ7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.9■■■□□ 2.06
Slfn3A0A1L1STQ7 Rab21-202ENSMUST00000218831 843 ntBASIC27.88■■■□□ 2.05
Slfn3A0A1L1STQ7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Slfn3A0A1L1STQ7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.8■■■□□ 2.04
Slfn3A0A1L1STQ7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Slfn3A0A1L1STQ7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Slfn3A0A1L1STQ7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.76■■■□□ 2.03
Slfn3A0A1L1STQ7 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.73■■■□□ 2.03
Slfn3A0A1L1STQ7 Gm25262-201ENSMUST00000174934 133 ntBASIC27.71■■■□□ 2.03
Slfn3A0A1L1STQ7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Slfn3A0A1L1STQ7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Slfn3A0A1L1STQ7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Slfn3A0A1L1STQ7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Slfn3A0A1L1STQ7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Slfn3A0A1L1STQ7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.51■■■□□ 2
Slfn3A0A1L1STQ7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Slfn3A0A1L1STQ7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Slfn3A0A1L1STQ7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.44■■□□□ 1.98
Slfn3A0A1L1STQ7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Slfn3A0A1L1STQ7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Slfn3A0A1L1STQ7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.31■■□□□ 1.96
Slfn3A0A1L1STQ7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Slfn3A0A1L1STQ7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.29■■□□□ 1.96
Slfn3A0A1L1STQ7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Slfn3A0A1L1STQ7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Slfn3A0A1L1STQ7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.28■■□□□ 1.96
Slfn3A0A1L1STQ7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms