RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 WDR47O94967 919 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 RHOCP08134 193 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 ZNF7P17097 686 aaPredicted RBP18.04■□□□□ 0.48
SSC4D-201ENST00000275560 TYMPP19971 482 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 PSMA3P25788 255 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 LIMK1P53667 647 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 WNT3P56703 355 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 ARF5P84085 180 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 CDK10Q15131 360 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 DUOXA1Q1HG43 343 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 LYPD8Q6UX82 237 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 STK40Q8N2I9 435 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 SH3KBP1Q96B97 665 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 C8orf48Q96LL4 319 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 MKLN1Q9UL63 735 aa18.04■□□□□ 0.48
SSC4D-201ENST00000275560 HTTP42858 3142 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 E9PQ18 207 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 TNFRSF11BO00300 401 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 CCRL2O00421 344 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 ARHGAP33O14559 1287 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 GPX5O75715 221 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 CD160O95971 181 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 ITPKAP23677 461 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 HOXC8P31273 242 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 CDH12P55289 794 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 DDX39BQ13838 428 aaKnown RBP18.03■□□□□ 0.48
SSC4D-201ENST00000275560 RNF219Q5W0B1 726 aaPredicted RBP18.03■□□□□ 0.48
SSC4D-201ENST00000275560 PAF1Q8N7H5 531 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 TRIM39Q9HCM9 518 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 PCDHB5Q9Y5E4 795 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 A0A0U1RQF3 1178 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 GJB5O95377 273 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 LAMP1P11279 417 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 DGKAP23743 735 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 CA8P35219 290 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 PPIGQ13427 754 aaKnown RBP eCLIP18.03■□□□□ 0.486e-7■■□□□ 12
SSC4D-201ENST00000275560 ARMC12Q5T9G4 340 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 NOXRED1Q6NXP6 359 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 LAX1Q8IWV1 398 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 OR10G2Q8NGC3 310 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 CHAC2Q8WUX2 184 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 GTPBP3Q969Y2 492 aaKnown RBP18.03■□□□□ 0.48
SSC4D-201ENST00000275560 COL21A1Q96P44 957 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 MCCC1Q96RQ3 725 aaPredicted RBP18.03■□□□□ 0.48
SSC4D-201ENST00000275560 BARHL1Q9BZE3 327 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 RANGRFQ9HD47 186 aaPredicted RBP18.03■□□□□ 0.48
SSC4D-201ENST00000275560 GKN1Q9NS71 199 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 FKBP14Q9NWM8 211 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 A3GALT2U3KPV4 340 aa18.03■□□□□ 0.48
SSC4D-201ENST00000275560 NINQ8N4C6 2090 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 H7C0S8 307 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 TNFRSF10AO00220 468 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 IRF1P10914 325 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 COX7A2P14406 83 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 SOX6P35712 828 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 SOX3P41225 446 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 SMU1Q2TAY7 513 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 NEK5Q6P3R8 708 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 ANGPTL8Q6UXH0 198 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 SYT12Q8IV01 421 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 TESCQ96BS2 214 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 SPATA17Q96L03 361 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 PHOX2BQ99453 314 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 PRM3Q9NNZ6 103 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 FZD4Q9ULV1 537 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 DUSP12Q9UNI6 340 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 PCDHB1Q9Y5F3 818 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 PCDHGA2Q9Y5H1 932 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 CCDC88CQ9P219 2028 aa18.02■□□□□ 0.48
SSC4D-201ENST00000275560 K7ERQ8 282 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 CAPN5O15484 640 aaPredicted RBP18.02■□□□□ 0.47
SSC4D-201ENST00000275560 ACSL4O60488 711 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 SCN2BO60939 215 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 GPX2P18283 190 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 RPIAP49247 311 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 STARD3Q14849 445 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 SSX1Q16384 188 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 ARMC4Q5T2S8 1044 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 OR7G1Q8NGA0 311 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 CEP295NLQ96MC4 621 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 NECTIN4Q96NY8 510 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 MGLLQ99685 303 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 KATNAL1Q9BW62 490 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 BBS2Q9BXC9 721 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 TPT1P8Q9HAU6 139 aa18.02■□□□□ 0.47
SSC4D-201ENST00000275560 NUFIP1Q9UHK0 495 aaKnown RBP18.02■□□□□ 0.47
SSC4D-201ENST00000275560 WWP2O00308 870 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 SUV39H1O43463 412 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 GCM2O75603 506 aaPredicted RBP18.01■□□□□ 0.47
SSC4D-201ENST00000275560 FHP07954 510 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 CKMT1AP12532 417 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 RPS19P39019 145 aaKnown RBP18.01■□□□□ 0.47
SSC4D-201ENST00000275560 GALK2Q01415 458 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 CTXN3Q4LDR2 81 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 GPRC6AQ5T6X5 926 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 ATCAYQ86WG3 371 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 SNX18Q96RF0 628 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 COPS8Q99627 209 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 NDUFAF4Q9P032 175 aa18.01■□□□□ 0.47
SSC4D-201ENST00000275560 MBD1Q9UIS9 605 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms