RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ern1Q9EQY0 977 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 IghaA0A0A6YXW6 389 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Prrt4B2RU40 902 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Xpnpep3B7ZMP1 506 aaKnown RBP13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fam46aD3Z5S8 447 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Adamts14E9PX39 1209 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Sult3a2G5E904 293 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Mab21l1O70299 359 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Hcn1O88704 910 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 JtbO88824 146 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 TekQ02858 1122 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Coq8bQ566J8 533 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Rnase12Q5GAM8 145 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Pi4k2bQ8CBQ5 469 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Rab25Q9WTL2 213 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 B3galt2O54905 422 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 H2-Q7P14429 334 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 H2-Q9P14431 200 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Arf3P61205 181 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Arf1P84078 181 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Padi2Q08642 673 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Cdkn2cQ60772 168 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Foxd1Q61345 456 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gpr158Q8C419 1200 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 SarafQ8R3Q0 334 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Pcdhb18Q91Y02 792 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Tcf7l2Q924A0 459 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 DpysQ9EQF5 519 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Serinc3Q9QZI9 472 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Akap8lQ9R0L7 642 aaKnown RBP13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 AtrnQ9WU60 1428 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 PiggD3Z3Y1 983 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 NmbrO54799 390 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Cldn5O54942 218 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Tuba1bP05213 451 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Ddx6P54823 483 aaKnown RBP13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Eif5aP63242 154 aaKnown RBP13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Tuba1aP68369 451 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fam198bQ3UPI1 517 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Map4k2Q61161 821 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Prmt6Q6NZB1 378 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fam25cQ8CF02 89 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Ppp1r8Q8R3G1 351 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 PgcQ9D7R7 392 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 DnpepQ9Z2W0 473 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm6592A2AHC7 168 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm11397F6V5V4 377 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Neu1O35657 409 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 TrhrP21761 393 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Klhdc9Q3USL1 350 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Cyp20a1Q8BKE6 462 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Samd14Q8K070 417 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Cmpk1Q9DBP5 196 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Nek7Q9ES74 302 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Olfr1508Q9R0K4 310 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Clic1Q9Z1Q5 241 aaKnown RBP13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fpr-rs3O88537 343 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Brd7O88665 651 aaKnown RBP13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Sept4P28661 478 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Atxn1P54254 791 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Pros1Q08761 675 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fzd4Q61088 537 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fcrl5Q68SN8 596 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Trappc6aQ78XR0 159 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Uhrf2Q7TMI3 803 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Piwil2Q8CDG1 971 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Col26a1Q91VF6 440 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Slc15a4Q91W98 574 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Tmed9Q99KF1 235 aaKnown RBP13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 ApmapQ9D7N9 415 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Tsga8Q9JJL0 238 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Adam28Q9JLN6 793 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Txnrd2Q9JLT4 524 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Naa10Q9QY36 235 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Clec2iQ9WVF9 217 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Ccdc166S4R181 449 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm14147A2AQX6 640 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm20441G3UYJ7 252 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Sap18O55128 153 aaKnown RBP13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Rab8aP55258 207 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Clcn4Q61418 747 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Six3Q62233 333 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Ccdc126Q8BIS8 140 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Zfp101Q8BP18 612 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 DlstQ9D2G2 454 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Clic3Q9D7P7 237 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm17190V9GX38 357 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Znf536Q8K083 1302 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm7792A0A0J9YU01 481 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 A0A286YDM2 672 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fam43bA2AM80 330 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm3183D3YUJ6 481 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 SmgcF6VRN1 385 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm3139J3QK78 481 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm3106J3QPH3 481 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Mtmr11Q3V1L6 700 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Acot4Q8BWN8 421 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Olfr1090Q8VGA6 313 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Sh3bp4Q921I6 962 aa13.69□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Slc25a11Q9CR62 314 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms