Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Gm25239-201ENSMUST00000174915 86 ntBASIC39.1■■■■□ 3.85
Trappc6aQ78XR0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.26■■■■□ 3.4
Trappc6aQ78XR0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Trappc6aQ78XR0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.99■■■■□ 3.03
Trappc6aQ78XR0 Gm15042-201ENSMUST00000120212 883 ntBASIC33.95■■■■□ 3.03
Trappc6aQ78XR0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Trappc6aQ78XR0 Gm15045-201ENSMUST00000117359 883 ntBASIC33.1■■■□□ 2.89
Trappc6aQ78XR0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Trappc6aQ78XR0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Trappc6aQ78XR0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.64■■■□□ 2.82
Trappc6aQ78XR0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Trappc6aQ78XR0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Trappc6aQ78XR0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Trappc6aQ78XR0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.81■■■□□ 2.68
Trappc6aQ78XR0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Trappc6aQ78XR0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.51■■■□□ 2.63
Trappc6aQ78XR0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
Trappc6aQ78XR0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Trappc6aQ78XR0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trappc6aQ78XR0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Trappc6aQ78XR0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trappc6aQ78XR0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Trappc6aQ78XR0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Trappc6aQ78XR0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.98■■■□□ 2.55
Trappc6aQ78XR0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Trappc6aQ78XR0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.91■■■□□ 2.54
Trappc6aQ78XR0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Trappc6aQ78XR0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Trappc6aQ78XR0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.87■■■□□ 2.53
Trappc6aQ78XR0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Trappc6aQ78XR0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
Trappc6aQ78XR0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Trappc6aQ78XR0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
Trappc6aQ78XR0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.24■■■□□ 2.43
Trappc6aQ78XR0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Trappc6aQ78XR0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trappc6aQ78XR0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.03■■■□□ 2.4
Trappc6aQ78XR0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trappc6aQ78XR0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Trappc6aQ78XR0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Trappc6aQ78XR0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.9■■■□□ 2.38
Trappc6aQ78XR0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trappc6aQ78XR0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.78■■■□□ 2.36
Trappc6aQ78XR0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.73■■■□□ 2.35
Trappc6aQ78XR0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.68■■■□□ 2.34
Trappc6aQ78XR0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.64■■■□□ 2.34
Trappc6aQ78XR0 Psd-208ENSMUST00000224556 2034 ntBASIC29.55■■■□□ 2.32
Trappc6aQ78XR0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Trappc6aQ78XR0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Trappc6aQ78XR0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Trappc6aQ78XR0 Rab21-202ENSMUST00000218831 843 ntBASIC29.31■■■□□ 2.28
Trappc6aQ78XR0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Trappc6aQ78XR0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.27■■■□□ 2.28
Trappc6aQ78XR0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.26■■■□□ 2.27
Trappc6aQ78XR0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.25■■■□□ 2.27
Trappc6aQ78XR0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.17■■■□□ 2.26
Trappc6aQ78XR0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Trappc6aQ78XR0 Gm26115-201ENSMUST00000175605 87 ntBASIC29.14■■■□□ 2.26
Trappc6aQ78XR0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Trappc6aQ78XR0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.08■■■□□ 2.25
Trappc6aQ78XR0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trappc6aQ78XR0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.98■■■□□ 2.23
Trappc6aQ78XR0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Trappc6aQ78XR0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Trappc6aQ78XR0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Trappc6aQ78XR0 Gm8109-201ENSMUST00000194076 746 ntBASIC28.93■■■□□ 2.22
Trappc6aQ78XR0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Trappc6aQ78XR0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Trappc6aQ78XR0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.91■■■□□ 2.22
Trappc6aQ78XR0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.87■■■□□ 2.21
Trappc6aQ78XR0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Trappc6aQ78XR0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trappc6aQ78XR0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Trappc6aQ78XR0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.74■■■□□ 2.19
Trappc6aQ78XR0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Trappc6aQ78XR0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.7■■■□□ 2.19
Trappc6aQ78XR0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trappc6aQ78XR0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.67■■■□□ 2.18
Trappc6aQ78XR0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Trappc6aQ78XR0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Trappc6aQ78XR0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Trappc6aQ78XR0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Trappc6aQ78XR0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Trappc6aQ78XR0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Trappc6aQ78XR0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Trappc6aQ78XR0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trappc6aQ78XR0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.35■■■□□ 2.13
Trappc6aQ78XR0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Trappc6aQ78XR0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.34■■■□□ 2.13
Trappc6aQ78XR0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trappc6aQ78XR0 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.25■■■□□ 2.11
Trappc6aQ78XR0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Trappc6aQ78XR0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Trappc6aQ78XR0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.21■■■□□ 2.11
Trappc6aQ78XR0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trappc6aQ78XR0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Trappc6aQ78XR0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trappc6aQ78XR0 Gm27322-201ENSMUST00000184007 104 ntBASIC28.12■■■□□ 2.09
Trappc6aQ78XR0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trappc6aQ78XR0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms