RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	TNA1	P53322	534 aa		4.03	□□□□□ -1.76
YPR039W	YPR039W	RSB1	Q08417	382 aa		4.03	□□□□□ -1.76
YPR039W	YPR039W	MKK2	P32491	506 aa		4.02	□□□□□ -1.77
YPR039W	YPR039W	CCZ1	P38273	704 aa		4.02	□□□□□ -1.77
YPR039W	YPR039W	LAM1	P38851	1228 aa		4.02	□□□□□ -1.77
YPR039W	YPR039W	SPT20	P50875	604 aa		4.02	□□□□□ -1.77
YPR039W	YPR039W	SGD1	Q06132	899 aa		4.02	□□□□□ -1.77
YPR039W	YPR039W	GCR1	P07261	785 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	CYC8	P14922	966 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	ATE1	P16639	503 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	SHM2	P37291	469 aa	Known RBP	4.01	□□□□□ -1.77
YPR039W	YPR039W	MEF2	P39677	819 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	HXT13	P39924	564 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	SEC26	P41810	973 aa	Known RBP	4.01	□□□□□ -1.77
YPR039W	YPR039W	HXT17	P53631	564 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	HXT15	P54854	567 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	YDR132C	Q03900	495 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	SPR28	Q04921	423 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	MRL1	Q06815	381 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	YOR352W	Q08816	343 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	MCD1	Q12158	566 aa		4.01	□□□□□ -1.77
YPR039W	YPR039W	YLR358C	O13565	187 aa		4	□□□□□ -1.77
YPR039W	YPR039W	YER152C	P10356	443 aa		4	□□□□□ -1.77
YPR039W	YPR039W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
YPR039W	YPR039W	SRM1	P21827	482 aa		4	□□□□□ -1.77
YPR039W	YPR039W	HEM3	P28789	327 aa		4	□□□□□ -1.77
YPR039W	YPR039W	MLS1	P30952	554 aa		4	□□□□□ -1.77
YPR039W	YPR039W	SEC8	P32855	1065 aa		4	□□□□□ -1.77
YPR039W	YPR039W	PIK1	P39104	1066 aa		4	□□□□□ -1.77
YPR039W	YPR039W	SIW14	P53965	281 aa		4	□□□□□ -1.77
YPR039W	YPR039W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
YPR039W	YPR039W	CLU1	Q03690	1277 aa	Known RBP	4	□□□□□ -1.77
YPR039W	YPR039W	CMP2	P14747	604 aa		3.99	□□□□□ -1.77
YPR039W	YPR039W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
YPR039W	YPR039W	POL32	P47110	350 aa		3.99	□□□□□ -1.77
YPR039W	YPR039W	GNP1	P48813	663 aa		3.99	□□□□□ -1.77
YPR039W	YPR039W	GCN5	Q03330	439 aa		3.99	□□□□□ -1.77
YPR039W	YPR039W	YPL260W	Q08977	551 aa		3.99	□□□□□ -1.77
YPR039W	YPR039W	GAL10	P04397	699 aa		3.98	□□□□□ -1.77
YPR039W	YPR039W	SYP1	P25623	870 aa	Known RBP	3.98	□□□□□ -1.77
YPR039W	YPR039W	CTS1	P29029	562 aa		3.98	□□□□□ -1.77
YPR039W	YPR039W	RPN3	P40016	523 aa	Known RBP	3.98	□□□□□ -1.77
YPR039W	YPR039W	TAF13	P11747	167 aa		3.97	□□□□□ -1.77
YPR039W	YPR039W	RFC5	P38251	354 aa		3.97	□□□□□ -1.77
YPR039W	YPR039W	MGE1	P38523	228 aa		3.97	□□□□□ -1.77
YPR039W	YPR039W	FYV10	P40492	516 aa		3.97	□□□□□ -1.77
YPR039W	YPR039W	DUS4	Q06063	367 aa		3.97	□□□□□ -1.77
YPR039W	YPR039W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
YPR039W	YPR039W	RIB2	Q12362	591 aa	Known RBP	3.97	□□□□□ -1.77
YPR039W	YPR039W	TAT2	P38967	592 aa		3.96	□□□□□ -1.78
YPR039W	YPR039W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
YPR039W	YPR039W	HNT2	P49775	206 aa		3.96	□□□□□ -1.78
YPR039W	YPR039W	RSM24	Q03976	319 aa		3.96	□□□□□ -1.78
YPR039W	YPR039W	RER2	P35196	286 aa		3.95	□□□□□ -1.78
YPR039W	YPR039W	RGD1	P38339	666 aa		3.95	□□□□□ -1.78
YPR039W	YPR039W	MXR1	P40029	184 aa		3.95	□□□□□ -1.78
YPR039W	YPR039W	CNN1	P43618	361 aa		3.95	□□□□□ -1.78
YPR039W	YPR039W	GCV2	P49095	1034 aa		3.95	□□□□□ -1.78
YPR039W	YPR039W	ENV11	P53246	860 aa		3.95	□□□□□ -1.78
YPR039W	YPR039W	GTF1	P53260	183 aa	Predicted RBP	3.95	□□□□□ -1.78
YPR039W	YPR039W	SVS1	Q12254	260 aa		3.95	□□□□□ -1.78
YPR039W	YPR039W	DBP5	P20449	482 aa	Known RBP	3.94	□□□□□ -1.78
YPR039W	YPR039W	APL1	P27351	700 aa		3.94	□□□□□ -1.78
YPR039W	YPR039W	ASF1	P32447	279 aa		3.94	□□□□□ -1.78
YPR039W	YPR039W	PEP7	P32609	515 aa		3.94	□□□□□ -1.78
YPR039W	YPR039W	MPH1	P40562	993 aa		3.94	□□□□□ -1.78
YPR039W	YPR039W	RRP15	Q06511	250 aa	Predicted RBP	3.94	□□□□□ -1.78
YPR039W	YPR039W	TUB2	P02557	457 aa	Known RBP	3.93	□□□□□ -1.78
YPR039W	YPR039W	BAS1	P22035	811 aa		3.93	□□□□□ -1.78
YPR039W	YPR039W	DBP2	P24783	546 aa	Known RBP	3.93	□□□□□ -1.78
YPR039W	YPR039W	CDC20	P26309	610 aa		3.93	□□□□□ -1.78
YPR039W	YPR039W	MCM7	P38132	845 aa		3.93	□□□□□ -1.78
YPR039W	YPR039W	YJR107W	P47145	328 aa		3.93	□□□□□ -1.78
YPR039W	YPR039W	TIF35	Q04067	274 aa	Known RBP	3.93	□□□□□ -1.78
YPR039W	YPR039W	CDC6	P09119	513 aa		3.92	□□□□□ -1.78
YPR039W	YPR039W	LST4	P34239	828 aa		3.92	□□□□□ -1.78
YPR039W	YPR039W	TMA10	Q06177	86 aa		3.92	□□□□□ -1.78
YPR039W	YPR039W	ACK1	Q07622	623 aa	Predicted RBP	3.92	□□□□□ -1.78
YPR039W	YPR039W	GPB1	Q08886	897 aa		3.92	□□□□□ -1.78
YPR039W	YPR039W	RPL11A	P0C0W9	174 aa	Known RBP	3.91	□□□□□ -1.78
YPR039W	YPR039W	KIN2	P13186	1147 aa	Known RBP	3.91	□□□□□ -1.78
YPR039W	YPR039W	UGA2	P38067	497 aa		3.91	□□□□□ -1.78
YPR039W	YPR039W	ENT3	P47160	408 aa		3.91	□□□□□ -1.78
YPR039W	YPR039W	RXT3	Q07458	294 aa		3.91	□□□□□ -1.78
YPR039W	YPR039W	RPL11B	Q3E757	174 aa	Predicted RBP	3.91	□□□□□ -1.78
YPR039W	YPR039W	BI4	P03879	638 aa		3.9	□□□□□ -1.79
YPR039W	YPR039W	MCM6	P53091	1017 aa	Known RBP	3.9	□□□□□ -1.79
YPR039W	YPR039W	YAP6	Q03935	383 aa		3.9	□□□□□ -1.79
YPR039W	YPR039W	RAD27	P26793	382 aa		3.89	□□□□□ -1.79
YPR039W	YPR039W	DOM34	P33309	386 aa		3.89	□□□□□ -1.79
YPR039W	YPR039W	MOT2	P34909	587 aa	Known RBP	3.89	□□□□□ -1.79
YPR039W	YPR039W	OYE2	Q03558	400 aa	Known RBP	3.89	□□□□□ -1.79
YPR039W	YPR039W	RTT10	Q08924	1013 aa		3.89	□□□□□ -1.79
YPR039W	YPR039W	ACE2	P21192	770 aa		3.88	□□□□□ -1.79
YPR039W	YPR039W	EMC1	P25574	760 aa		3.88	□□□□□ -1.79
YPR039W	YPR039W	PHO23	P50947	330 aa		3.88	□□□□□ -1.79
YPR039W	YPR039W	HFM1	P51979	1187 aa		3.88	□□□□□ -1.79
YPR039W	YPR039W	MSC2	Q03455	724 aa		3.88	□□□□□ -1.79
YPR039W	YPR039W	GSF2	Q04697	403 aa	Known RBP	3.88	□□□□□ -1.79
YPR039W	YPR039W	ESF1	Q06344	628 aa	Known RBP	3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms