RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	ORC4	P54791	529 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	MFM1	Q02783	413 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	BUL2	Q03758	920 aa	Known RBP	13.55	□□□□□ -0.24
TIR4	YOR009W	SPH1	Q06160	661 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	AFT2	Q08957	416 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	ARP6	Q12509	438 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	PSY4	P38193	441 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	VAB2	P40003	282 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	CTR1	P49573	406 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	LIF1	P53150	421 aa		13.55	□□□□□ -0.24
TIR4	YOR009W	WHI4	Q07655	649 aa	Known RBP	13.55	□□□□□ -0.24
TIR4	YOR009W	YEL076C-A	P0CX16	216 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	YLR464W	P0CX17	216 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	MCM2	P29469	868 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	SHP1	P34223	423 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	YEL076C	P39971	216 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	BRE2	P43132	505 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	CBK1	P53894	756 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	DUS3	Q06053	668 aa	Known RBP	13.54	□□□□□ -0.24
TIR4	YOR009W	YLR326W	Q06170	240 aa	Known RBP	13.54	□□□□□ -0.24
TIR4	YOR009W	RKM4	Q12504	494 aa		13.54	□□□□□ -0.24
TIR4	YOR009W	SES1	P07284	462 aa	Known RBP	13.53	□□□□□ -0.24
TIR4	YOR009W	MIC60	P36112	540 aa		13.53	□□□□□ -0.24
TIR4	YOR009W	ISW1	P38144	1129 aa		13.53	□□□□□ -0.24
TIR4	YOR009W	WAR1	Q03631	944 aa		13.53	□□□□□ -0.24
TIR4	YOR009W	GUD1	Q07729	489 aa		13.53	□□□□□ -0.24
TIR4	YOR009W	FOB1	O13329	566 aa		13.52	□□□□□ -0.25
TIR4	YOR009W	UTR4	P32626	227 aa		13.52	□□□□□ -0.25
TIR4	YOR009W	MCD4	P36051	919 aa		13.52	□□□□□ -0.25
TIR4	YOR009W	NET1	P47035	1189 aa		13.52	□□□□□ -0.25
TIR4	YOR009W	LSC2	P53312	427 aa		13.52	□□□□□ -0.25
TIR4	YOR009W	YLH47	Q06493	454 aa		13.52	□□□□□ -0.25
TIR4	YOR009W	SMC6	Q12749	1114 aa		13.52	□□□□□ -0.25
TIR4	YOR009W	CKA2	P19454	339 aa		13.51	□□□□□ -0.25
TIR4	YOR009W	MPE1	P35728	441 aa	Known RBP	13.51	□□□□□ -0.25
TIR4	YOR009W	VTC2	P43585	828 aa		13.51	□□□□□ -0.25
TIR4	YOR009W	TMA16	Q08687	178 aa		13.51	□□□□□ -0.25
TIR4	YOR009W	ISY1	P21374	235 aa	Predicted RBP	13.5	□□□□□ -0.25
TIR4	YOR009W	ROG3	P43602	733 aa		13.5	□□□□□ -0.25
TIR4	YOR009W	HVG1	P0CE11	249 aa		13.49	□□□□□ -0.25
TIR4	YOR009W	MIP1	P15801	1254 aa		13.49	□□□□□ -0.25
TIR4	YOR009W	IXR1	P33417	597 aa		13.49	□□□□□ -0.25
TIR4	YOR009W	UBP11	P36026	717 aa		13.49	□□□□□ -0.25
TIR4	YOR009W	MCR1	P36060	302 aa	Known RBP	13.49	□□□□□ -0.25
TIR4	YOR009W	PGA2	P53903	129 aa		13.49	□□□□□ -0.25
TIR4	YOR009W	YPR148C	Q06523	435 aa		13.49	□□□□□ -0.25
TIR4	YOR009W	VMA2	P16140	517 aa	Known RBP	13.48	□□□□□ -0.25
TIR4	YOR009W	ESS1	P22696	170 aa		13.48	□□□□□ -0.25
TIR4	YOR009W	YGR237C	P50089	785 aa		13.48	□□□□□ -0.25
TIR4	YOR009W	YGL039W	P53183	348 aa	Known RBP	13.48	□□□□□ -0.25
TIR4	YOR009W	PTA1	Q01329	785 aa	Predicted RBP	13.48	□□□□□ -0.25
TIR4	YOR009W	CFT2	Q12102	859 aa	Predicted RBP	13.48	□□□□□ -0.25
TIR4	YOR009W	ADE17	P38009	592 aa	Known RBP	13.48	□□□□□ -0.25
TIR4	YOR009W	PIH1	P38768	344 aa		13.48	□□□□□ -0.25
TIR4	YOR009W	GPD2	P41911	440 aa	Known RBP	13.48	□□□□□ -0.25
TIR4	YOR009W	DIP5	P53388	608 aa		13.48	□□□□□ -0.25
TIR4	YOR009W	GFD1	Q04839	188 aa	Known RBP	13.48	□□□□□ -0.25
TIR4	YOR009W	FUS2	Q05670	677 aa		13.48	□□□□□ -0.25
TIR4	YOR009W	YKR018C	P36114	725 aa		13.47	□□□□□ -0.25
TIR4	YOR009W	BCD1	P38772	366 aa		13.47	□□□□□ -0.25
TIR4	YOR009W	TLG2	Q08144	397 aa		13.47	□□□□□ -0.25
TIR4	YOR009W	BSD2	P38356	321 aa		13.46	□□□□□ -0.25
TIR4	YOR009W	SIP3	P38717	1229 aa		13.46	□□□□□ -0.25
TIR4	YOR009W	GPB2	P39717	880 aa		13.46	□□□□□ -0.25
TIR4	YOR009W	GUP1	P53154	560 aa		13.46	□□□□□ -0.25
TIR4	YOR009W	HCR1	Q05775	265 aa	Known RBP	13.46	□□□□□ -0.25
TIR4	YOR009W	SPP382	Q06411	708 aa	Predicted RBP	13.46	□□□□□ -0.25
TIR4	YOR009W	YOL075C	Q08234	1294 aa		13.46	□□□□□ -0.25
TIR4	YOR009W	YPL216W	Q08964	1102 aa		13.46	□□□□□ -0.25
TIR4	YOR009W	SUP45	P12385	437 aa	Known RBP	13.45	□□□□□ -0.26
TIR4	YOR009W	PSO2	P30620	661 aa		13.45	□□□□□ -0.26
TIR4	YOR009W	EUG1	P32474	517 aa		13.45	□□□□□ -0.26
TIR4	YOR009W	AIP1	P46680	615 aa	Known RBP	13.45	□□□□□ -0.26
TIR4	YOR009W	JIP4	Q03361	876 aa		13.45	□□□□□ -0.26
TIR4	YOR009W	RBA50	Q04418	439 aa		13.45	□□□□□ -0.26
TIR4	YOR009W	TOM1	Q03280	3268 aa		13.45	□□□□□ -0.26
TIR4	YOR009W	PRP22	P24384	1145 aa	Known RBP	13.44	□□□□□ -0.26
TIR4	YOR009W	RAM2	P29703	316 aa		13.44	□□□□□ -0.26
TIR4	YOR009W	PGM1	P33401	570 aa	Known RBP	13.44	□□□□□ -0.26
TIR4	YOR009W	PPS1	P38148	807 aa		13.44	□□□□□ -0.26
TIR4	YOR009W	ULP2	P40537	1034 aa	Predicted RBP	13.44	□□□□□ -0.26
TIR4	YOR009W	ISA1	Q07821	250 aa	Predicted RBP	13.44	□□□□□ -0.26
TIR4	YOR009W	ERP3	Q12403	225 aa		13.44	□□□□□ -0.26
TIR4	YOR009W	PGK1	P00560	416 aa	Known RBP	13.43	□□□□□ -0.26
TIR4	YOR009W	PFK1	P16861	987 aa	Known RBP	13.43	□□□□□ -0.26
TIR4	YOR009W	CDC60	P26637	1090 aa	Known RBP	13.43	□□□□□ -0.26
TIR4	YOR009W	SUV3	P32580	737 aa		13.43	□□□□□ -0.26
TIR4	YOR009W	ASH1	P34233	588 aa		13.43	□□□□□ -0.26
TIR4	YOR009W	NUP82	P40368	713 aa		13.43	□□□□□ -0.26
TIR4	YOR009W	YGR125W	P53273	1036 aa		13.43	□□□□□ -0.26
TIR4	YOR009W	CNM67	P53865	581 aa	Known RBP	13.43	□□□□□ -0.26
TIR4	YOR009W	CLN3	P13365	580 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	PKC1	P24583	1151 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	CLB5	P30283	435 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	YET1	P35723	206 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	TFG2	P41896	400 aa	Predicted RBP	13.42	□□□□□ -0.26
TIR4	YOR009W	PHM6	Q05637	104 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	CST9	Q06032	482 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	DUS4	Q06063	367 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	YDL057W	Q07379	328 aa		13.42	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 130.1 ms