RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C KIP1P28742 1111 aa4.81□□□□□ -1.64
ATG3YNR007C CCZ1P38273 704 aa4.81□□□□□ -1.64
ATG3YNR007C PIC2P40035 300 aa4.81□□□□□ -1.64
ATG3YNR007C YPL277CQ08989 487 aa4.81□□□□□ -1.64
ATG3YNR007C PTC5Q12511 572 aa4.81□□□□□ -1.64
ATG3YNR007C TOD6P34219 525 aa4.8□□□□□ -1.64
ATG3YNR007C BAP2P38084 609 aa4.8□□□□□ -1.64
ATG3YNR007C HOS3Q02959 697 aaKnown RBP4.8□□□□□ -1.64
ATG3YNR007C MCD1Q12158 566 aa4.8□□□□□ -1.64
ATG3YNR007C ALG3P38179 458 aa4.79□□□□□ -1.64
ATG3YNR007C IPL1P38991 367 aa4.79□□□□□ -1.64
ATG3YNR007C YGR122WP53272 402 aa4.79□□□□□ -1.64
ATG3YNR007C TNA1P53322 534 aa4.79□□□□□ -1.64
ATG3YNR007C HDA2Q06629 674 aa4.79□□□□□ -1.64
ATG3YNR007C RCL1Q08096 367 aaPredicted RBP4.79□□□□□ -1.64
ATG3YNR007C SSN2P38931 1420 aa4.79□□□□□ -1.64
ATG3YNR007C YOR093CQ12275 1648 aa4.79□□□□□ -1.64
ATG3YNR007C DED1P06634 604 aaKnown RBP4.78□□□□□ -1.64
ATG3YNR007C PRE9P23638 258 aaKnown RBP4.78□□□□□ -1.64
ATG3YNR007C MRPS18P42847 217 aa4.78□□□□□ -1.64
ATG3YNR007C YPL260WQ08977 551 aa4.78□□□□□ -1.64
ATG3YNR007C MET5P47169 1442 aa4.78□□□□□ -1.64
ATG3YNR007C SLD2P34252 453 aa4.77□□□□□ -1.65
ATG3YNR007C PIK1P39104 1066 aa4.77□□□□□ -1.65
ATG3YNR007C GPB2P39717 880 aa4.77□□□□□ -1.65
ATG3YNR007C RPN3P40016 523 aaKnown RBP4.77□□□□□ -1.65
ATG3YNR007C ENT3P47160 408 aa4.77□□□□□ -1.65
ATG3YNR007C HNT2P49775 206 aa4.77□□□□□ -1.65
ATG3YNR007C RSB1Q08417 382 aa4.77□□□□□ -1.65
ATG3YNR007C YOR352WQ08816 343 aa4.77□□□□□ -1.65
ATG3YNR007C SSK2P53599 1579 aa4.77□□□□□ -1.65
ATG3YNR007C YLR358CO13565 187 aa4.76□□□□□ -1.65
ATG3YNR007C SEC26P41810 973 aaKnown RBP4.76□□□□□ -1.65
ATG3YNR007C SEN54Q02825 467 aaPredicted RBP4.76□□□□□ -1.65
ATG3YNR007C SGD1Q06132 899 aa4.76□□□□□ -1.65
ATG3YNR007C SNF5P18480 905 aa4.75□□□□□ -1.65
ATG3YNR007C PUF4P25339 888 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
ATG3YNR007C SIW14P53965 281 aa4.75□□□□□ -1.65
ATG3YNR007C SPO21Q12411 609 aa4.75□□□□□ -1.65
ATG3YNR007C ATG2P53855 1592 aa4.74□□□□□ -1.65
ATG3YNR007C SIN3P22579 1536 aa4.74□□□□□ -1.65
ATG3YNR007C RAD2P07276 1031 aa4.74□□□□□ -1.65
ATG3YNR007C PRE10P21242 288 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
ATG3YNR007C MKK2P32491 506 aa4.74□□□□□ -1.65
ATG3YNR007C LAM1P38851 1228 aa4.74□□□□□ -1.65
ATG3YNR007C ROD1Q02805 837 aa4.74□□□□□ -1.65
ATG3YNR007C CLU1Q03690 1277 aaKnown RBP4.74□□□□□ -1.65
ATG3YNR007C YDR132CQ03900 495 aa4.74□□□□□ -1.65
ATG3YNR007C DNF2Q12675 1612 aa4.74□□□□□ -1.65
ATG3YNR007C GEA2P39993 1459 aaKnown RBP4.74□□□□□ -1.65
ATG3YNR007C SKI3P17883 1432 aaKnown RBP4.73□□□□□ -1.65
ATG3YNR007C CYC1P00044 109 aaPredicted RBP4.73□□□□□ -1.65
ATG3YNR007C CYC8P14922 966 aa4.73□□□□□ -1.65
ATG3YNR007C SEC8P32855 1065 aa4.73□□□□□ -1.65
ATG3YNR007C MEF2P39677 819 aa4.73□□□□□ -1.65
ATG3YNR007C RAT1Q02792 1006 aaKnown RBP4.73□□□□□ -1.65
ATG3YNR007C RGD1P38339 666 aa4.72□□□□□ -1.65
ATG3YNR007C RPS26AP39938 119 aaKnown RBP4.72□□□□□ -1.65
ATG3YNR007C RPS26BP39939 119 aaKnown RBP4.72□□□□□ -1.65
ATG3YNR007C GCN5Q03330 439 aa4.72□□□□□ -1.65
ATG3YNR007C ABZ1P37254 787 aaPredicted RBP4.71□□□□□ -1.66
ATG3YNR007C MGE1P38523 228 aa4.71□□□□□ -1.66
ATG3YNR007C HXT13P39924 564 aa4.71□□□□□ -1.66
ATG3YNR007C SPT20P50875 604 aa4.71□□□□□ -1.66
ATG3YNR007C HXT17P53631 564 aa4.71□□□□□ -1.66
ATG3YNR007C HXT15P54854 567 aa4.71□□□□□ -1.66
ATG3YNR007C RSM24Q03976 319 aa4.71□□□□□ -1.66
ATG3YNR007C GSF2Q04697 403 aaKnown RBP4.71□□□□□ -1.66
ATG3YNR007C ESC1Q03661 1658 aaKnown RBP4.7□□□□□ -1.66
ATG3YNR007C SYP1P25623 870 aaKnown RBP4.7□□□□□ -1.66
ATG3YNR007C RFC5P38251 354 aa4.7□□□□□ -1.66
ATG3YNR007C CNN1P43618 361 aa4.7□□□□□ -1.66
ATG3YNR007C GNP1P48813 663 aa4.7□□□□□ -1.66
ATG3YNR007C MRL1Q06815 381 aa4.7□□□□□ -1.66
ATG3YNR007C CTS1P29029 562 aa4.69□□□□□ -1.66
ATG3YNR007C SHM2P37291 469 aaKnown RBP4.69□□□□□ -1.66
ATG3YNR007C TAT2P38967 592 aa4.69□□□□□ -1.66
ATG3YNR007C POL32P47110 350 aa4.69□□□□□ -1.66
ATG3YNR007C ROT1Q03691 256 aa4.69□□□□□ -1.66
ATG3YNR007C GCR1P07261 785 aa4.68□□□□□ -1.66
ATG3YNR007C YER152CP10356 443 aa4.68□□□□□ -1.66
ATG3YNR007C DBP5P20449 482 aaKnown RBP4.68□□□□□ -1.66
ATG3YNR007C MLS1P30952 554 aa4.68□□□□□ -1.66
ATG3YNR007C DOM34P33309 386 aa4.68□□□□□ -1.66
ATG3YNR007C MPT5P39016 859 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
ATG3YNR007C PLB2Q03674 706 aa4.68□□□□□ -1.66
ATG3YNR007C DUS4Q06063 367 aa4.68□□□□□ -1.66
ATG3YNR007C KIN2P13186 1147 aaKnown RBP4.67□□□□□ -1.66
ATG3YNR007C YFL054CP43549 646 aa4.67□□□□□ -1.66
ATG3YNR007C SVS1Q12254 260 aa4.67□□□□□ -1.66
ATG3YNR007C ESP1Q03018 1630 aa4.66□□□□□ -1.66
ATG3YNR007C GAL10P04397 699 aa4.66□□□□□ -1.66
ATG3YNR007C CMP2P14747 604 aa4.66□□□□□ -1.66
ATG3YNR007C MCM2P29469 868 aa4.66□□□□□ -1.66
ATG3YNR007C YJR107WP47145 328 aa4.66□□□□□ -1.66
ATG3YNR007C TUB2P02557 457 aaKnown RBP4.65□□□□□ -1.67
ATG3YNR007C ATE1P16639 503 aa4.65□□□□□ -1.67
ATG3YNR007C SRM1P21827 482 aa4.65□□□□□ -1.67
ATG3YNR007C RAD27P26793 382 aa4.65□□□□□ -1.67
ATG3YNR007C MPH1P40562 993 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 82.8 ms