RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	BOI1	P38041	980 aa	Known RBP	7.68	□□□□□ -1.18
MSB3	YNL293W	MRX1	P40050	688 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	TRS85	P46944	698 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	DAS1	P47005	663 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	YML020W	Q03722	664 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	ENT2	Q05785	613 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	DCS1	Q06151	350 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	YPL277C	Q08989	487 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	SNU66	Q12420	587 aa	Predicted RBP	7.68	□□□□□ -1.18
MSB3	YNL293W	YBL111C	Q3E7Y5	667 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	DNF1	P32660	1571 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	MER1	P16523	270 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	DPB3	P27344	201 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	YJU2	P28320	278 aa	Predicted RBP	7.68	□□□□□ -1.18
MSB3	YNL293W	SLX5	P32828	619 aa	Known RBP	7.68	□□□□□ -1.18
MSB3	YNL293W	PTR2	P32901	601 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	OCT1	P35999	772 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	UIP5	P36137	443 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	YER034W	P40022	185 aa	Known RBP	7.68	□□□□□ -1.18
MSB3	YNL293W	CCT5	P40413	562 aa	Known RBP	7.68	□□□□□ -1.18
MSB3	YNL293W	ALB1	P47019	175 aa	Predicted RBP	7.68	□□□□□ -1.18
MSB3	YNL293W	GPI8	P49018	411 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	MPS2	P53159	387 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	COG6	P53959	839 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	CIK1	Q01649	594 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	GCR2	Q01722	534 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	SPO71	Q03868	1245 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	YLR177W	Q06251	628 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	TEF1	P02994	458 aa	Known RBP	7.67	□□□□□ -1.18
MSB3	YNL293W	CDC16	P09798	840 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	KGD2	P19262	463 aa	Predicted RBP	7.67	□□□□□ -1.18
MSB3	YNL293W	UBC6	P33296	250 aa	Predicted RBP	7.67	□□□□□ -1.18
MSB3	YNL293W	SPC42	P36094	363 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	SLX8	P40072	274 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	HUL4	P40985	892 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	URB2	P47108	1174 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	HAM1	P47119	197 aa	Known RBP	7.67	□□□□□ -1.18
MSB3	YNL293W	SSN8	P47821	323 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	SGD1	Q06132	899 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	ARV1	Q06541	321 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	SYO1	Q07395	620 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	CTI6	Q08923	506 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	TAF3	Q12297	353 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	YRM1	Q12340	786 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	DNF2	Q12675	1612 aa		7.67	□□□□□ -1.18
MSB3	YNL293W	JIP3	O13555	125 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	PGK1	P00560	416 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	FUS1	P11710	512 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	VPS1	P21576	704 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	PKC1	P24583	1151 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	TSR4	P25040	408 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	PEP7	P32609	515 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	PPX1	P38698	397 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	STN1	P38960	494 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	MEF2	P39677	819 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	SAP185	P40856	1058 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	IPI3	P53877	555 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	CEG1	Q01159	459 aa	Predicted RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	SRP1	Q02821	542 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	SXM1	Q04175	944 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	ATG17	Q06410	417 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	ACF2	Q12168	779 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	SCM3	Q12334	223 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	OCA6	Q12454	224 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	YAP1	P19880	650 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	UBC1	P21734	215 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	PWP2	P25635	923 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	MSH2	P25847	964 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	YHL012W	P38709	493 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	ERP2	P39704	215 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	SCS2	P40075	244 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	IES1	P43579	692 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	PEX21	P50091	288 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	MAL13	P53338	473 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	SQS1	P53866	767 aa	Known RBP	7.66	□□□□□ -1.18
MSB3	YNL293W	MUB1	Q03162	620 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	RSM24	Q03976	319 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	YPQ2	Q06328	317 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	MSH5	Q12175	901 aa		7.66	□□□□□ -1.18
MSB3	YNL293W	HAP1	P0CE41	1502 aa		7.65	□□□□□ -1.18
MSB3	YNL293W	RNR2	P09938	399 aa	Known RBP	7.65	□□□□□ -1.18
MSB3	YNL293W	OSM1	P21375	501 aa	Known RBP	7.65	□□□□□ -1.18
MSB3	YNL293W	PRP22	P24384	1145 aa	Known RBP	7.65	□□□□□ -1.18
MSB3	YNL293W	LOS1	P33418	1100 aa	Predicted RBP	7.65	□□□□□ -1.18
MSB3	YNL293W	UGA2	P38067	497 aa		7.65	□□□□□ -1.18
MSB3	YNL293W	FCY21	P40039	528 aa		7.65	□□□□□ -1.18
MSB3	YNL293W	MDJ2	P42834	146 aa		7.65	□□□□□ -1.18
MSB3	YNL293W	SAP155	P43612	1002 aa		7.65	□□□□□ -1.18
MSB3	YNL293W	STB2	P46679	850 aa		7.65	□□□□□ -1.18
MSB3	YNL293W	APS3	P47064	194 aa		7.65	□□□□□ -1.18
MSB3	YNL293W	RNR4	P49723	345 aa	Known RBP	7.65	□□□□□ -1.18
MSB3	YNL293W	NMT1	P14743	455 aa		7.64	□□□□□ -1.19
MSB3	YNL293W	THR1	P17423	357 aa	Known RBP	7.64	□□□□□ -1.19
MSB3	YNL293W	ADE2	P21264	571 aa	Known RBP	7.64	□□□□□ -1.19
MSB3	YNL293W	SSE1	P32589	693 aa	Known RBP	7.64	□□□□□ -1.19
MSB3	YNL293W	SAS3	P34218	831 aa		7.64	□□□□□ -1.19
MSB3	YNL293W	YKL063C	P35725	167 aa		7.64	□□□□□ -1.19
MSB3	YNL293W	MIA40	P36046	403 aa		7.64	□□□□□ -1.19
MSB3	YNL293W	RIM21	P48565	533 aa		7.64	□□□□□ -1.19
MSB3	YNL293W	UBA2	P52488	636 aa		7.64	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms