RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSH155	YMR288W	YJR124C	P47159	448 aa		2.61	□□□□□ -1.99
HSH155	YMR288W	NUT1	P53114	1132 aa		2.61	□□□□□ -1.99
HSH155	YMR288W	DSE4	P53753	1117 aa		2.61	□□□□□ -1.99
HSH155	YMR288W	ALD3	P54114	506 aa		2.61	□□□□□ -1.99
HSH155	YMR288W	FAB1	P34756	2278 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	NAR1	P23503	491 aa	Known RBP	2.6	□□□□□ -1.99
HSH155	YMR288W	RRM3	P38766	723 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	DAK2	P43550	591 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	MTR4	P47047	1073 aa	Known RBP	2.6	□□□□□ -1.99
HSH155	YMR288W	YIL177C	P40434	1758 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	YJL225C	P40889	1758 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	RSC6	P25632	483 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	PEX13	P80667	386 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	MSH6	Q03834	1242 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	ESF1	Q06344	628 aa	Known RBP	2.6	□□□□□ -1.99
HSH155	YMR288W	BUD21	Q08492	214 aa	Predicted RBP	2.6	□□□□□ -1.99
HSH155	YMR288W	MCD1	Q12158	566 aa		2.6	□□□□□ -1.99
HSH155	YMR288W	NPR1	P22211	790 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	RAD27	P26793	382 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	SEC8	P32855	1065 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	PAN5	P38787	379 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	AVT1	P47082	602 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	YAF9	P53930	226 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	AVO1	Q08236	1176 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	RIM15	P43565	1770 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	IRA1	P18963	3092 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	MRP10	O75012	95 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	RPS26A	P39938	119 aa	Known RBP	2.59	□□□□□ -1.99
HSH155	YMR288W	RPS26B	P39939	119 aa	Known RBP	2.59	□□□□□ -1.99
HSH155	YMR288W	MAD1	P40957	749 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	SAP155	P43612	1002 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	UTP22	P53254	1237 aa	Predicted RBP	2.59	□□□□□ -1.99
HSH155	YMR288W	SVF1	Q05515	481 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	ELG1	Q12050	791 aa		2.59	□□□□□ -1.99
HSH155	YMR288W	HSE1	P38753	452 aa		2.58	□□□□□ -2
HSH155	YMR288W	BUD9	P53226	547 aa		2.58	□□□□□ -2
HSH155	YMR288W	YGR122W	P53272	402 aa		2.58	□□□□□ -2
HSH155	YMR288W	CWC24	P53769	259 aa		2.58	□□□□□ -2
HSH155	YMR288W	RMD1	Q03441	430 aa		2.58	□□□□□ -2
HSH155	YMR288W	HAS1	Q03532	505 aa	Known RBP	2.58	□□□□□ -2
HSH155	YMR288W	MED7	Q08278	222 aa		2.58	□□□□□ -2
HSH155	YMR288W	MCM2	P29469	868 aa		2.58	□□□□□ -2
HSH155	YMR288W	KAE1	P36132	386 aa		2.58	□□□□□ -2
HSH155	YMR288W	YNR065C	P53751	1116 aa		2.58	□□□□□ -2
HSH155	YMR288W	RIX7	Q07844	837 aa	Known RBP	2.58	□□□□□ -2
HSH155	YMR288W	NSI1	Q12457	570 aa		2.58	□□□□□ -2
HSH155	YMR288W	MHP1	P43638	1398 aa		2.58	□□□□□ -2
HSH155	YMR288W	TY4B-P	A0A0B7P3V8	1104 aa		2.58	□□□□□ -2
HSH155	YMR288W	CTT1	P06115	562 aa		2.58	□□□□□ -2
HSH155	YMR288W	YKL133C	P36066	463 aa		2.58	□□□□□ -2
HSH155	YMR288W	TFA2	P36145	328 aa		2.58	□□□□□ -2
HSH155	YMR288W	KRI1	P42846	591 aa	Known RBP	2.58	□□□□□ -2
HSH155	YMR288W	YJR107W	P47145	328 aa		2.58	□□□□□ -2
HSH155	YMR288W	ULP1	Q02724	621 aa		2.58	□□□□□ -2
HSH155	YMR288W	ADI1	Q03677	179 aa		2.58	□□□□□ -2
HSH155	YMR288W	LAP2	Q10740	671 aa		2.58	□□□□□ -2
HSH155	YMR288W	CMR1	Q12510	522 aa	Known RBP	2.58	□□□□□ -2
HSH155	YMR288W	TY4A-H	Q6Q5P6	413 aa		2.58	□□□□□ -2
HSH155	YMR288W	ADE6	P38972	1358 aa	Known RBP	2.57	□□□□□ -2
HSH155	YMR288W	ATE1	P16639	503 aa		2.57	□□□□□ -2
HSH155	YMR288W	CLN2	P20438	545 aa		2.57	□□□□□ -2
HSH155	YMR288W	REI1	P38344	393 aa	Predicted RBP	2.57	□□□□□ -2
HSH155	YMR288W	RIM11	P38615	370 aa		2.57	□□□□□ -2
HSH155	YMR288W	CTR9	P89105	1077 aa		2.57	□□□□□ -2
HSH155	YMR288W	JIP5	Q06214	492 aa	Predicted RBP	2.57	□□□□□ -2
HSH155	YMR288W	AIM44	Q99299	758 aa		2.57	□□□□□ -2
HSH155	YMR288W	RAD2	P07276	1031 aa		2.57	□□□□□ -2
HSH155	YMR288W	PEX28	P38848	579 aa		2.57	□□□□□ -2
HSH155	YMR288W	GCV1	P48015	400 aa		2.57	□□□□□ -2
HSH155	YMR288W	YOR223W	Q12015	292 aa		2.57	□□□□□ -2
HSH155	YMR288W	HTS1	P07263	546 aa	Known RBP	2.56	□□□□□ -2
HSH155	YMR288W	SFA1	P32771	386 aa		2.56	□□□□□ -2
HSH155	YMR288W	PET112	P33893	541 aa		2.56	□□□□□ -2
HSH155	YMR288W	INP52	P50942	1183 aa		2.56	□□□□□ -2
HSH155	YMR288W	MEC3	Q02574	474 aa		2.56	□□□□□ -2
HSH155	YMR288W	AI3	P03877	415 aa		2.56	□□□□□ -2
HSH155	YMR288W	ARL1	P38116	183 aa	Known RBP	2.56	□□□□□ -2
HSH155	YMR288W	HXK1	P04806	485 aa	Known RBP	2.55	□□□□□ -2
HSH155	YMR288W	RET1	P22276	1149 aa	Known RBP	2.55	□□□□□ -2
HSH155	YMR288W	MSH3	P25336	1018 aa		2.55	□□□□□ -2
HSH155	YMR288W	TOS1	P38288	455 aa		2.55	□□□□□ -2
HSH155	YMR288W	FAA3	P39002	694 aa		2.55	□□□□□ -2
HSH155	YMR288W	FYV10	P40492	516 aa		2.55	□□□□□ -2
HSH155	YMR288W	KIP3	P53086	805 aa	Known RBP	2.55	□□□□□ -2
HSH155	YMR288W	YNR063W	P53749	607 aa		2.55	□□□□□ -2
HSH155	YMR288W	YPL109C	Q02981	657 aa		2.55	□□□□□ -2
HSH155	YMR288W	DOT1	Q04089	582 aa	Known RBP	2.55	□□□□□ -2
HSH155	YMR288W	SPR28	Q04921	423 aa		2.55	□□□□□ -2
HSH155	YMR288W	MRL1	Q06815	381 aa		2.55	□□□□□ -2
HSH155	YMR288W	GAS5	Q08193	484 aa		2.55	□□□□□ -2
HSH155	YMR288W	YIG1	Q08956	461 aa		2.55	□□□□□ -2
HSH155	YMR288W	RTC1	Q08281	1341 aa		2.55	□□□□□ -2
HSH155	YMR288W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected
HSH155	YMR288W	CYC8	P14922	966 aa		2.55	□□□□□ -2
HSH155	YMR288W	POL5	P39985	1022 aa	Known RBP	2.55	□□□□□ -2
HSH155	YMR288W	YIL089W	P40500	205 aa		2.55	□□□□□ -2
HSH155	YMR288W	ARI1	P53111	347 aa	Known RBP	2.55	□□□□□ -2
HSH155	YMR288W	DED1	P06634	604 aa	Known RBP	2.55	□□□□□ -2
HSH155	YMR288W	TAF13	P11747	167 aa		2.55	□□□□□ -2
HSH155	YMR288W	XKS1	P42826	600 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms