RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C RSC58Q07979 502 aa1.13□□□□□ -2.23
RKR1YMR247C YLR122CQ12312 125 aa1.13□□□□□ -2.23
RKR1YMR247C PMI40P29952 429 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C DCG1P32460 244 aa1.13□□□□□ -2.23
RKR1YMR247C RRP14P36080 434 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C APT2P36973 181 aa1.13□□□□□ -2.23
RKR1YMR247C RFC5P38251 354 aa1.13□□□□□ -2.23
RKR1YMR247C MSH4P40965 878 aaPredicted RBP1.13□□□□□ -2.23
RKR1YMR247C ZDS1P50111 915 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C UTP5Q04177 643 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C YOR131CQ12486 218 aa1.13□□□□□ -2.23
RKR1YMR247C YKL107WP34251 309 aa1.13□□□□□ -2.23
RKR1YMR247C URM1P40554 99 aaPredicted RBP1.13□□□□□ -2.23
RKR1YMR247C MPH1P40562 993 aa1.13□□□□□ -2.23
RKR1YMR247C CLA4P48562 842 aa1.13□□□□□ -2.23
RKR1YMR247C INP52P50942 1183 aa1.13□□□□□ -2.23
RKR1YMR247C UGO1Q03327 502 aa1.13□□□□□ -2.23
RKR1YMR247C CEF1Q03654 590 aaPredicted RBP1.13□□□□□ -2.23
RKR1YMR247C YLR257WQ06146 321 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C MAG2Q06436 670 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C TDA6Q06466 467 aa1.13□□□□□ -2.23
RKR1YMR247C BRE4Q07660 1125 aa1.13□□□□□ -2.23
RKR1YMR247C CDC48P25694 835 aaKnown RBP1.12□□□□□ -2.23
RKR1YMR247C MET4P32389 672 aa1.12□□□□□ -2.23
RKR1YMR247C TRM2P33753 639 aa1.12□□□□□ -2.23
RKR1YMR247C PNT1P38969 423 aa1.12□□□□□ -2.23
RKR1YMR247C UBP5P39944 805 aa1.12□□□□□ -2.23
RKR1YMR247C KTR7P40504 517 aa1.12□□□□□ -2.23
RKR1YMR247C YGR045CP53229 120 aa1.12□□□□□ -2.23
RKR1YMR247C UTP8P53276 713 aaKnown RBP1.12□□□□□ -2.23
RKR1YMR247C SOK2P53438 785 aaPredicted RBP1.12□□□□□ -2.23
RKR1YMR247C DAL4Q04895 635 aa1.12□□□□□ -2.23
RKR1YMR247C WRS1Q12109 432 aaKnown RBP1.12□□□□□ -2.23
RKR1YMR247C OSH2Q12451 1283 aa1.12□□□□□ -2.23
RKR1YMR247C PTC5Q12511 572 aa1.12□□□□□ -2.23
RKR1YMR247C RET1P22276 1149 aaKnown RBP1.12□□□□□ -2.23
RKR1YMR247C MSH3P25336 1018 aa1.12□□□□□ -2.23
RKR1YMR247C DPB3P27344 201 aa1.12□□□□□ -2.23
RKR1YMR247C XKS1P42826 600 aa1.12□□□□□ -2.23
RKR1YMR247C CHA4P43634 648 aa1.12□□□□□ -2.23
RKR1YMR247C YNR040WP53736 256 aa1.12□□□□□ -2.23
RKR1YMR247C PRP22P24384 1145 aaKnown RBP1.12□□□□□ -2.23
RKR1YMR247C PCM1P38628 557 aaKnown RBP1.12□□□□□ -2.23
RKR1YMR247C PEX7P39108 375 aa1.12□□□□□ -2.23
RKR1YMR247C GNP1P48813 663 aa1.12□□□□□ -2.23
RKR1YMR247C TYW3P53177 273 aa1.12□□□□□ -2.23
RKR1YMR247C YNL165WP53891 406 aa1.12□□□□□ -2.23
RKR1YMR247C CTR9P89105 1077 aa1.12□□□□□ -2.23
RKR1YMR247C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23 RIP-Chip
RKR1YMR247C MSC2Q03455 724 aa1.12□□□□□ -2.23
RKR1YMR247C HLR1Q04429 423 aa1.12□□□□□ -2.23
RKR1YMR247C SPP382Q06411 708 aaPredicted RBP1.12□□□□□ -2.23
RKR1YMR247C YVC1Q12324 675 aa1.12□□□□□ -2.23
RKR1YMR247C DFG16Q99234 619 aa1.12□□□□□ -2.23
RKR1YMR247C HIS5P07172 385 aa1.12□□□□□ -2.23
RKR1YMR247C PRE10P21242 288 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
RKR1YMR247C PAM1P37304 830 aaKnown RBP1.12□□□□□ -2.23
RKR1YMR247C BSD2P38356 321 aa1.12□□□□□ -2.23
RKR1YMR247C HUL4P40985 892 aa1.12□□□□□ -2.23
RKR1YMR247C OYE3P41816 400 aaPredicted RBP1.12□□□□□ -2.23
RKR1YMR247C YKE2P52553 114 aa1.12□□□□□ -2.23
RKR1YMR247C PPN1Q04119 674 aa1.12□□□□□ -2.23
RKR1YMR247C OSW2Q12202 724 aa1.12□□□□□ -2.23
RKR1YMR247C SPO21Q12411 609 aa1.12□□□□□ -2.23
RKR1YMR247C TRM11Q12463 433 aa1.12□□□□□ -2.23
RKR1YMR247C RPN13O13563 156 aa1.11□□□□□ -2.23
RKR1YMR247C SNF5P18480 905 aa1.11□□□□□ -2.23
RKR1YMR247C HSP60P19882 572 aaKnown RBP1.11□□□□□ -2.23
RKR1YMR247C OMA1P36163 345 aa1.11□□□□□ -2.23
RKR1YMR247C YBR259WP38338 688 aa1.11□□□□□ -2.23
RKR1YMR247C EMP65P40085 556 aa1.11□□□□□ -2.23
RKR1YMR247C STU2P46675 888 aa1.11□□□□□ -2.23
RKR1YMR247C GPI13Q07830 1017 aa1.11□□□□□ -2.23
RKR1YMR247C YMR084WA2P2R3 262 aa1.11□□□□□ -2.23
RKR1YMR247C MPH2P0CD99 609 aa1.11□□□□□ -2.23
RKR1YMR247C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
RKR1YMR247C CDC12P32468 407 aaKnown RBP1.11□□□□□ -2.23
RKR1YMR247C MKK2P32491 506 aa1.11□□□□□ -2.23
RKR1YMR247C RPT1P33299 467 aaKnown RBP1.11□□□□□ -2.23
RKR1YMR247C MAL31P38156 614 aa1.11□□□□□ -2.23
RKR1YMR247C HSL7P38274 827 aa1.11□□□□□ -2.23
RKR1YMR247C NEM1P38757 446 aa1.11□□□□□ -2.23
RKR1YMR247C DAK2P43550 591 aa1.11□□□□□ -2.23
RKR1YMR247C ATP25Q03153 612 aa1.11□□□□□ -2.23
RKR1YMR247C YDR132CQ03900 495 aa1.11□□□□□ -2.23
RKR1YMR247C YLR125WQ12138 136 aa1.11□□□□□ -2.23
RKR1YMR247C YTA7P40340 1379 aa1.11□□□□□ -2.23
RKR1YMR247C SAM35P14693 329 aa1.11□□□□□ -2.23
RKR1YMR247C CCT3P39077 534 aaKnown RBP1.11□□□□□ -2.23
RKR1YMR247C THI12P42883 340 aa1.11□□□□□ -2.23
RKR1YMR247C THI5P43534 340 aa1.11□□□□□ -2.23
RKR1YMR247C THI11P47183 340 aa1.11□□□□□ -2.23
RKR1YMR247C GCN5Q03330 439 aa1.11□□□□□ -2.23
RKR1YMR247C RPN4Q03465 531 aa1.11□□□□□ -2.23
RKR1YMR247C TPP1Q03796 238 aa1.11□□□□□ -2.23
RKR1YMR247C YDL124WQ07551 312 aaKnown RBP1.11□□□□□ -2.23
RKR1YMR247C THI13Q07748 340 aa1.11□□□□□ -2.23
RKR1YMR247C CYC7P00045 113 aa1.1□□□□□ -2.23
RKR1YMR247C ACE2P21192 770 aa1.1□□□□□ -2.23
RKR1YMR247C TFA2P36145 328 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms