RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W YGL176CP46945 554 aa4.52□□□□□ -1.69
SEN1YLR430W SWP1Q02795 286 aa4.52□□□□□ -1.69
SEN1YLR430W GCN3P14741 305 aa4.52□□□□□ -1.69
SEN1YLR430W MBR1P23493 339 aa4.52□□□□□ -1.69
SEN1YLR430W ATP16Q12165 160 aa4.52□□□□□ -1.69
SEN1YLR430W ARC19P33204 171 aaKnown RBP4.51□□□□□ -1.69
SEN1YLR430W NNT1Q05874 261 aa4.51□□□□□ -1.69
SEN1YLR430W APL4Q12028 832 aa4.51□□□□□ -1.69
SEN1YLR430W SRB4P32569 687 aa4.51□□□□□ -1.69
SEN1YLR430W UBP13P38187 747 aa4.51□□□□□ -1.69
SEN1YLR430W PHB1P40961 287 aa4.51□□□□□ -1.69
SEN1YLR430W RTP1Q12751 981 aa4.51□□□□□ -1.69
SEN1YLR430W DCD1P06773 312 aa4.51□□□□□ -1.69
SEN1YLR430W KIP1P28742 1111 aa4.51□□□□□ -1.69
SEN1YLR430W SEC8P32855 1065 aa4.51□□□□□ -1.69
SEN1YLR430W YLR287CQ05881 355 aa4.51□□□□□ -1.69
SEN1YLR430W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
SEN1YLR430W WHI5Q12416 295 aa4.51□□□□□ -1.69
SEN1YLR430W ESC1Q03661 1658 aaKnown RBP4.51□□□□□ -1.69
SEN1YLR430W CPA2P03965 1118 aaKnown RBP4.51□□□□□ -1.69
SEN1YLR430W HEL2Q05580 639 aaKnown RBP4.51□□□□□ -1.69
SEN1YLR430W HCR1Q05775 265 aaKnown RBP4.51□□□□□ -1.69
SEN1YLR430W NOP12Q08208 459 aaKnown RBP4.51□□□□□ -1.69
SEN1YLR430W RMP1Q12530 201 aa4.51□□□□□ -1.69
SEN1YLR430W RAD53P22216 821 aa4.51□□□□□ -1.69
SEN1YLR430W RRP43P25359 394 aaPredicted RBP4.51□□□□□ -1.69
SEN1YLR430W PYC2P32327 1180 aaKnown RBP4.51□□□□□ -1.69
SEN1YLR430W FCY21P40039 528 aa4.51□□□□□ -1.69
SEN1YLR430W FIN1Q03898 291 aa4.51□□□□□ -1.69
SEN1YLR430W SSQ1Q05931 657 aaPredicted RBP4.51□□□□□ -1.69
SEN1YLR430W OPY2Q06810 360 aa4.51□□□□□ -1.69
SEN1YLR430W ELG1Q12050 791 aa4.51□□□□□ -1.69
SEN1YLR430W DPS1P04802 557 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W PAP1P29468 568 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W ATO2P32907 282 aa4.5□□□□□ -1.69
SEN1YLR430W KAP114P53067 1004 aa4.5□□□□□ -1.69
SEN1YLR430W MCM6P53091 1017 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W MDR1P53258 950 aa4.5□□□□□ -1.69
SEN1YLR430W GDE1Q02979 1223 aa4.5□□□□□ -1.69
SEN1YLR430W SPO71Q03868 1245 aa4.5□□□□□ -1.69
SEN1YLR430W RSC2Q06488 889 aa4.5□□□□□ -1.69
SEN1YLR430W RPO41P13433 1351 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W YAP1P19880 650 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W SSE1P32589 693 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W JNM1P36224 373 aa4.5□□□□□ -1.69
SEN1YLR430W ILV3P39522 585 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W YML082WQ04533 649 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W YOR296WQ08748 1289 aa4.5□□□□□ -1.69
SEN1YLR430W RPL22AP05749 121 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W SBP1P10080 294 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W PEP7P32609 515 aa4.5□□□□□ -1.69
SEN1YLR430W PEX5P35056 612 aa4.5□□□□□ -1.69
SEN1YLR430W ATG3P40344 310 aa4.5□□□□□ -1.69
SEN1YLR430W STB2P46679 850 aa4.5□□□□□ -1.69
SEN1YLR430W JJJ2P46997 583 aa4.5□□□□□ -1.69
SEN1YLR430W BRO1P48582 844 aa4.5□□□□□ -1.69
SEN1YLR430W CTF18P49956 741 aa4.5□□□□□ -1.69
SEN1YLR430W DML1Q03652 475 aa4.5□□□□□ -1.69
SEN1YLR430W GTB1Q04924 702 aa4.5□□□□□ -1.69
SEN1YLR430W SEC63P14906 663 aa4.5□□□□□ -1.69
SEN1YLR430W SLA1P32790 1244 aa4.5□□□□□ -1.69
SEN1YLR430W UTP11P34247 250 aaPredicted RBP4.5□□□□□ -1.69
SEN1YLR430W BOI1P38041 980 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W TIF4631P39935 952 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W IES2P40154 320 aa4.5□□□□□ -1.69
SEN1YLR430W MET12P46151 657 aa4.5□□□□□ -1.69
SEN1YLR430W PCL8Q08966 492 aa4.5□□□□□ -1.69
SEN1YLR430W SPO21Q12411 609 aa4.5□□□□□ -1.69
SEN1YLR430W PDC1P06169 563 aaKnown RBP4.5□□□□□ -1.69
SEN1YLR430W URB2P47108 1174 aa4.5□□□□□ -1.69
SEN1YLR430W GIR2Q03768 265 aaPredicted RBP4.5□□□□□ -1.69
SEN1YLR430W SEC10Q06245 871 aa4.5□□□□□ -1.69
SEN1YLR430W PHO13P19881 312 aa4.49□□□□□ -1.69
SEN1YLR430W VAN1P23642 535 aa4.49□□□□□ -1.69
SEN1YLR430W MEF1P25039 761 aa4.49□□□□□ -1.69
SEN1YLR430W BUD23P25627 275 aaPredicted RBP4.49□□□□□ -1.69
SEN1YLR430W EFT1P32324 842 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W MDS3P53094 1487 aa4.49□□□□□ -1.69
SEN1YLR430W CLB2P24869 491 aa4.49□□□□□ -1.69
SEN1YLR430W HXT6P39003 570 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W HXT7P39004 570 aa4.49□□□□□ -1.69
SEN1YLR430W TY4A-JP47023 414 aa4.49□□□□□ -1.69
SEN1YLR430W STR2P47164 639 aa4.49□□□□□ -1.69
SEN1YLR430W ECL1P48235 211 aa4.49□□□□□ -1.69
SEN1YLR430W UBP15P50101 1230 aa4.49□□□□□ -1.69
SEN1YLR430W TFB4Q12004 338 aa4.49□□□□□ -1.69
SEN1YLR430W HTZ1Q12692 134 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W PGK1P00560 416 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W DPB2P24482 689 aaPredicted RBP4.49□□□□□ -1.69
SEN1YLR430W RDS1P25611 832 aa4.49□□□□□ -1.69
SEN1YLR430W YHL017WP38745 532 aa4.49□□□□□ -1.69
SEN1YLR430W POL31P46957 487 aa4.49□□□□□ -1.69
SEN1YLR430W HGH1P48362 394 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W IMD4P50094 524 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W PPM1Q04081 328 aa4.49□□□□□ -1.69
SEN1YLR430W SNA3P14359 133 aa4.49□□□□□ -1.69
SEN1YLR430W RME1P32338 300 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W MVD1P32377 396 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W SMC1P32908 1225 aa4.49□□□□□ -1.69
SEN1YLR430W MPS2P53159 387 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms