RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C ABZ1P37254 787 aaPredicted RBP6.01□□□□□ -1.45
VPS1YKR001C OTU2P38747 307 aaKnown RBP6.01□□□□□ -1.45
VPS1YKR001C ILV3P39522 585 aaKnown RBP6.01□□□□□ -1.45
VPS1YKR001C MXR1P40029 184 aa6.01□□□□□ -1.45
VPS1YKR001C ENP2P48234 707 aaKnown RBP6.01□□□□□ -1.45
VPS1YKR001C HOP2P53187 214 aa6.01□□□□□ -1.45
VPS1YKR001C OYE2Q03558 400 aaKnown RBP6.01□□□□□ -1.45
VPS1YKR001C ERB1Q04660 807 aaKnown RBP6.01□□□□□ -1.45
VPS1YKR001C YPR097WQ06839 1073 aa6.01□□□□□ -1.45
VPS1YKR001C YDL073WQ07454 984 aa6.01□□□□□ -1.45
VPS1YKR001C THI3Q07471 609 aa6.01□□□□□ -1.45
VPS1YKR001C HNM1P19807 563 aa6.01□□□□□ -1.45
VPS1YKR001C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
VPS1YKR001C PRD1P25375 712 aa6.01□□□□□ -1.45
VPS1YKR001C RPS7AP26786 190 aaKnown RBP6.01□□□□□ -1.45
VPS1YKR001C RXT2P38255 430 aa6.01□□□□□ -1.45
VPS1YKR001C RTT105P40063 208 aa6.01□□□□□ -1.45
VPS1YKR001C RTR1P40084 226 aaPredicted RBP6.01□□□□□ -1.45
VPS1YKR001C SPR3P41901 512 aa6.01□□□□□ -1.45
VPS1YKR001C YVH1Q02256 364 aaKnown RBP6.01□□□□□ -1.45
VPS1YKR001C RNH1Q04740 348 aa6.01□□□□□ -1.45
VPS1YKR001C SPP382Q06411 708 aaPredicted RBP6.01□□□□□ -1.45
VPS1YKR001C ACK1Q07622 623 aaPredicted RBP6.01□□□□□ -1.45
VPS1YKR001C ISA1Q07821 250 aaPredicted RBP6.01□□□□□ -1.45
VPS1YKR001C YIL002W-AQ3E7Z5 69 aa6.01□□□□□ -1.45
VPS1YKR001C DPH5P32469 300 aaPredicted RBP6□□□□□ -1.45
VPS1YKR001C NGR1P32831 672 aaKnown RBP6□□□□□ -1.45
VPS1YKR001C YBR287WP38355 427 aa6□□□□□ -1.45
VPS1YKR001C MET18P40469 1032 aa6□□□□□ -1.45
VPS1YKR001C PSD2P53037 1138 aaKnown RBP6□□□□□ -1.45
VPS1YKR001C IST1P53843 298 aaPredicted RBP6□□□□□ -1.45
VPS1YKR001C RNT1Q02555 471 aa6□□□□□ -1.45
VPS1YKR001C MTC5Q03897 1148 aa6□□□□□ -1.45
VPS1YKR001C TOS4Q06266 489 aa6□□□□□ -1.45
VPS1YKR001C FBP1P09201 348 aa5.99□□□□□ -1.45
VPS1YKR001C RME1P32338 300 aaKnown RBP5.99□□□□□ -1.45
VPS1YKR001C PAH1P32567 862 aa5.99□□□□□ -1.45
VPS1YKR001C OLA1P38219 394 aaKnown RBP5.99□□□□□ -1.45
VPS1YKR001C VPS29P38759 282 aa5.99□□□□□ -1.45
VPS1YKR001C RRP8P38961 392 aaKnown RBP5.99□□□□□ -1.45
VPS1YKR001C LAM5P43560 674 aa5.99□□□□□ -1.45
VPS1YKR001C SXM1Q04175 944 aaKnown RBP5.99□□□□□ -1.45
VPS1YKR001C RAD50P12753 1312 aa5.99□□□□□ -1.45
VPS1YKR001C TRX2P22803 104 aaKnown RBP5.99□□□□□ -1.45
VPS1YKR001C FUI1P38196 639 aa5.99□□□□□ -1.45
VPS1YKR001C STM1P39015 273 aaKnown RBP5.99□□□□□ -1.45
VPS1YKR001C FTR1P40088 404 aa5.99□□□□□ -1.45
VPS1YKR001C RIC1P40395 1056 aa5.99□□□□□ -1.45
VPS1YKR001C PXA1P41909 870 aa5.99□□□□□ -1.45
VPS1YKR001C IOC3P43596 787 aa5.99□□□□□ -1.45
VPS1YKR001C YJL171CP46992 396 aa5.99□□□□□ -1.45
VPS1YKR001C INP52P50942 1183 aa5.99□□□□□ -1.45
VPS1YKR001C IRC4Q03036 179 aa5.99□□□□□ -1.45
VPS1YKR001C YMR111CQ04461 462 aaPredicted RBP5.99□□□□□ -1.45
VPS1YKR001C DBP9Q06218 594 aaKnown RBP5.99□□□□□ -1.45
VPS1YKR001C GRC3Q07845 632 aa5.99□□□□□ -1.45
VPS1YKR001C YOR352WQ08816 343 aa5.99□□□□□ -1.45
VPS1YKR001C NOT3P06102 836 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C LEU1P07264 779 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C LCB1P25045 558 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C PSE1P32337 1089 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C CDC3P32457 520 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C SSZ1P38788 538 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C CIN4P39110 191 aa5.98□□□□□ -1.45
VPS1YKR001C YRB1P41920 201 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C NNF1P47149 201 aa5.98□□□□□ -1.45
VPS1YKR001C VPS60Q03390 229 aa5.98□□□□□ -1.45
VPS1YKR001C YDR306CQ06640 478 aa5.98□□□□□ -1.45
VPS1YKR001C NOC3Q07896 663 aaPredicted RBP5.98□□□□□ -1.45
VPS1YKR001C SLK19Q08581 821 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C YPR117WQ06116 2489 aa5.98□□□□□ -1.45
VPS1YKR001C HOM3P10869 527 aa5.98□□□□□ -1.45
VPS1YKR001C HEM3P28789 327 aa5.98□□□□□ -1.45
VPS1YKR001C GGA2P38817 585 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C SET1P38827 1080 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C BFR1P38934 470 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45 RIP-Chip
VPS1YKR001C STN1P38960 494 aa5.98□□□□□ -1.45
VPS1YKR001C DAS1P47005 663 aa5.98□□□□□ -1.45
VPS1YKR001C WRS1Q12109 432 aaKnown RBP5.98□□□□□ -1.45
VPS1YKR001C PSF3Q12146 194 aa5.98□□□□□ -1.45
VPS1YKR001C YBL111CQ3E7Y5 667 aa5.98□□□□□ -1.45
VPS1YKR001C TPM1P17536 199 aaKnown RBP5.97□□□□□ -1.45
VPS1YKR001C NUP133P36161 1157 aa5.97□□□□□ -1.45
VPS1YKR001C SET2P46995 733 aaKnown RBP5.97□□□□□ -1.45
VPS1YKR001C CLA4P48562 842 aa5.97□□□□□ -1.45
VPS1YKR001C ULP1Q02724 621 aa5.97□□□□□ -1.45
VPS1YKR001C RPN4Q03465 531 aa5.97□□□□□ -1.45
VPS1YKR001C SRC1Q03707 834 aa5.97□□□□□ -1.45
VPS1YKR001C RRN11Q04712 507 aa5.97□□□□□ -1.45
VPS1YKR001C ATG38Q05789 226 aaKnown RBP5.97□□□□□ -1.45
VPS1YKR001C RRP36Q12481 300 aaPredicted RBP5.97□□□□□ -1.45
VPS1YKR001C FLO1P32768 1537 aa5.97□□□□□ -1.45
VPS1YKR001C TAO3P40468 2376 aa5.97□□□□□ -1.45
VPS1YKR001C FOB1O13329 566 aa5.96□□□□□ -1.45
VPS1YKR001C PMS1P14242 873 aa5.96□□□□□ -1.45
VPS1YKR001C PFK2P16862 959 aaKnown RBP RIP-Chip data5.96□□□□□ -1.45not detected
VPS1YKR001C KRR1P25586 316 aaPredicted RBP5.96□□□□□ -1.45
VPS1YKR001C PAP1P29468 568 aaKnown RBP5.96□□□□□ -1.45
VPS1YKR001C SWC3P31376 625 aa5.96□□□□□ -1.45
VPS1YKR001C VPS24P36095 224 aaKnown RBP5.96□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms