RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W MCD1Q12158 566 aa2.13□□□□□ -2.07
APL1YJR005W YER152CP10356 443 aa2.12□□□□□ -2.07
APL1YJR005W BAP2P38084 609 aa2.12□□□□□ -2.07
APL1YJR005W SIW14P53965 281 aa2.12□□□□□ -2.07
APL1YJR005W HOS3Q02959 697 aaKnown RBP2.12□□□□□ -2.07
APL1YJR005W CYC1P00044 109 aaPredicted RBP2.12□□□□□ -2.07
APL1YJR005W SRM1P21827 482 aa2.12□□□□□ -2.07
APL1YJR005W MLS1P30952 554 aa2.12□□□□□ -2.07
APL1YJR005W SEC8P32855 1065 aa2.12□□□□□ -2.07
APL1YJR005W YJR107WP47145 328 aa2.12□□□□□ -2.07
APL1YJR005W RIM8P53179 542 aa2.12□□□□□ -2.07
APL1YJR005W SNO2P53823 222 aa2.12□□□□□ -2.07
APL1YJR005W PLB2Q03674 706 aa2.12□□□□□ -2.07
APL1YJR005W ROT1Q03691 256 aa2.12□□□□□ -2.07
APL1YJR005W RIB2Q12362 591 aaKnown RBP2.12□□□□□ -2.07
APL1YJR005W COQ4O13525 335 aa2.11□□□□□ -2.07
APL1YJR005W SOD2P00447 233 aa2.11□□□□□ -2.07
APL1YJR005W FOL2P51601 243 aaKnown RBP2.11□□□□□ -2.07
APL1YJR005W TNA1P53322 534 aa2.11□□□□□ -2.07
APL1YJR005W TAF7Q05021 590 aa2.11□□□□□ -2.07
APL1YJR005W NBA1Q08229 501 aaKnown RBP2.11□□□□□ -2.07
APL1YJR005W SYP1P25623 870 aaKnown RBP2.11□□□□□ -2.07
APL1YJR005W CCZ1P38273 704 aa2.11□□□□□ -2.07
APL1YJR005W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
APL1YJR005W YDR132CQ03900 495 aa2.11□□□□□ -2.07
APL1YJR005W SLD2P34252 453 aa2.1□□□□□ -2.07
APL1YJR005W RER2P35196 286 aa2.1□□□□□ -2.07
APL1YJR005W MGE1P38523 228 aa2.1□□□□□ -2.07
APL1YJR005W MXR1P40029 184 aa2.1□□□□□ -2.07
APL1YJR005W SEC26P41810 973 aaKnown RBP2.1□□□□□ -2.07
APL1YJR005W RSB1Q08417 382 aa2.1□□□□□ -2.07
APL1YJR005W YPL260WQ08977 551 aa2.1□□□□□ -2.07
APL1YJR005W GAL10P04397 699 aa2.09□□□□□ -2.07
APL1YJR005W TAF13P11747 167 aa2.09□□□□□ -2.07
APL1YJR005W DBP2P24783 546 aaKnown RBP2.09□□□□□ -2.07
APL1YJR005W PEP7P32609 515 aa2.09□□□□□ -2.07
APL1YJR005W LAM1P38851 1228 aa2.09□□□□□ -2.07
APL1YJR005W PIK1P39104 1066 aa2.09□□□□□ -2.07
APL1YJR005W RPN3P40016 523 aaKnown RBP2.09□□□□□ -2.07
APL1YJR005W MPH1P40562 993 aa2.09□□□□□ -2.07
APL1YJR005W CNN1P43618 361 aa2.09□□□□□ -2.07
APL1YJR005W SPT20P50875 604 aa2.09□□□□□ -2.07
APL1YJR005W TIF35Q04067 274 aaKnown RBP2.09□□□□□ -2.07
APL1YJR005W SGD1Q06132 899 aa2.09□□□□□ -2.07
APL1YJR005W NOP8Q08287 484 aaPredicted RBP2.09□□□□□ -2.07
APL1YJR005W CMP2P14747 604 aa2.09□□□□□ -2.08
APL1YJR005W DBP5P20449 482 aaKnown RBP2.09□□□□□ -2.08
APL1YJR005W PUF4P25339 888 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
APL1YJR005W DUT1P33317 147 aa2.09□□□□□ -2.08
APL1YJR005W YPT53P36019 220 aa2.09□□□□□ -2.08
APL1YJR005W MCM7P38132 845 aa2.09□□□□□ -2.08
APL1YJR005W RGD1P38339 666 aa2.09□□□□□ -2.08
APL1YJR005W MEF2P39677 819 aa2.09□□□□□ -2.08
APL1YJR005W GCN5Q03330 439 aa2.09□□□□□ -2.08
APL1YJR005W OYE2Q03558 400 aaKnown RBP2.09□□□□□ -2.08
APL1YJR005W YPL066WQ12194 479 aa2.09□□□□□ -2.08
APL1YJR005W PRE10P21242 288 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
APL1YJR005W BAS1P22035 811 aa2.08□□□□□ -2.08
APL1YJR005W CTS1P29029 562 aa2.08□□□□□ -2.08
APL1YJR005W MOT2P34909 587 aaKnown RBP2.08□□□□□ -2.08
APL1YJR005W GCV2P49095 1034 aa2.08□□□□□ -2.08
APL1YJR005W CLU1Q03690 1277 aaKnown RBP2.08□□□□□ -2.08
APL1YJR005W DUS4Q06063 367 aa2.08□□□□□ -2.08
APL1YJR005W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
APL1YJR005W CDC6P09119 513 aa2.08□□□□□ -2.08
APL1YJR005W RPL11AP0C0W9 174 aaKnown RBP2.08□□□□□ -2.08
APL1YJR005W SHM2P37291 469 aaKnown RBP2.08□□□□□ -2.08
APL1YJR005W UGA2P38067 497 aa2.08□□□□□ -2.08
APL1YJR005W RFC5P38251 354 aa2.08□□□□□ -2.08
APL1YJR005W GTF1P53260 183 aaPredicted RBP2.08□□□□□ -2.08
APL1YJR005W EEB1Q02891 456 aa2.08□□□□□ -2.08
APL1YJR005W ESC2Q06340 456 aa2.08□□□□□ -2.08
APL1YJR005W ESF1Q06344 628 aaKnown RBP2.08□□□□□ -2.08
APL1YJR005W SVS1Q12254 260 aa2.08□□□□□ -2.08
APL1YJR005W RPL11BQ3E757 174 aaPredicted RBP2.08□□□□□ -2.08
APL1YJR005W TRP2P00899 507 aaKnown RBP2.07□□□□□ -2.08
APL1YJR005W BI4P03879 638 aa2.07□□□□□ -2.08
APL1YJR005W ENT3P47160 408 aa2.07□□□□□ -2.08
APL1YJR005W RTT10Q08924 1013 aa2.07□□□□□ -2.08
APL1YJR005W YLR358CO13565 187 aa2.06□□□□□ -2.08
APL1YJR005W APL1P27351 700 aa2.06□□□□□ -2.08
APL1YJR005W TAT2P38967 592 aa2.06□□□□□ -2.08
APL1YJR005W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
APL1YJR005W RSM24Q03976 319 aa2.06□□□□□ -2.08
APL1YJR005W XYL2Q07993 356 aa2.06□□□□□ -2.08
APL1YJR005W YOR352WQ08816 343 aa2.06□□□□□ -2.08
APL1YJR005W ACE2P21192 770 aa2.06□□□□□ -2.08
APL1YJR005W CDC20P26309 610 aa2.06□□□□□ -2.08
APL1YJR005W HEM3P28789 327 aa2.06□□□□□ -2.08
APL1YJR005W LST4P34239 828 aa2.06□□□□□ -2.08
APL1YJR005W MPT5P39016 859 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
APL1YJR005W HNT2P49775 206 aa2.06□□□□□ -2.08
APL1YJR005W YAP6Q03935 383 aa2.06□□□□□ -2.08
APL1YJR005W TMA10Q06177 86 aa2.06□□□□□ -2.08
APL1YJR005W TAD3Q9URQ3 322 aa2.06□□□□□ -2.08
APL1YJR005W INO1P11986 533 aa2.05□□□□□ -2.08
APL1YJR005W CDC34P14682 295 aa2.05□□□□□ -2.08
APL1YJR005W SLA2P33338 968 aa2.05□□□□□ -2.08
APL1YJR005W PET112P33893 541 aa2.05□□□□□ -2.08
APL1YJR005W HFM1P51979 1187 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 105.1 ms