RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeastyeast

Gene IST3, Length 447 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IST3YIR005W SIW14P53965 281 aa5.81□□□□□ -1.48
IST3YIR005W SPO21Q12411 609 aa5.81□□□□□ -1.48
IST3YIR005W PRE10P21242 288 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
IST3YIR005W PUF4P25339 888 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
IST3YIR005W ROD1Q02805 837 aa5.79□□□□□ -1.48
IST3YIR005W SEN54Q02825 467 aaPredicted RBP5.79□□□□□ -1.48
IST3YIR005W LAM1P38851 1228 aa5.78□□□□□ -1.48
IST3YIR005W GCN5Q03330 439 aa5.78□□□□□ -1.48
IST3YIR005W GSF2Q04697 403 aaKnown RBP5.78□□□□□ -1.48
IST3YIR005W CYC1P00044 109 aaPredicted RBP5.77□□□□□ -1.49
IST3YIR005W RAD2P07276 1031 aa5.77□□□□□ -1.49
IST3YIR005W CTS1P29029 562 aa5.77□□□□□ -1.49
IST3YIR005W MKK2P32491 506 aa5.77□□□□□ -1.49
IST3YIR005W SLD2P34252 453 aa5.77□□□□□ -1.49
IST3YIR005W RGD1P38339 666 aa5.77□□□□□ -1.49
IST3YIR005W SPT20P50875 604 aa5.77□□□□□ -1.49
IST3YIR005W RAT1Q02792 1006 aaKnown RBP5.77□□□□□ -1.49
IST3YIR005W CYC8P14922 966 aa5.76□□□□□ -1.49
IST3YIR005W MEF2P39677 819 aa5.76□□□□□ -1.49
IST3YIR005W SEC8P32855 1065 aa5.75□□□□□ -1.49
IST3YIR005W HXT13P39924 564 aa5.75□□□□□ -1.49
IST3YIR005W GNP1P48813 663 aa5.75□□□□□ -1.49
IST3YIR005W HXT17P53631 564 aa5.75□□□□□ -1.49
IST3YIR005W HXT15P54854 567 aa5.75□□□□□ -1.49
IST3YIR005W ABZ1P37254 787 aaPredicted RBP5.74□□□□□ -1.49
IST3YIR005W MGE1P38523 228 aa5.74□□□□□ -1.49
IST3YIR005W TAT2P38967 592 aa5.74□□□□□ -1.49
IST3YIR005W RSM24Q03976 319 aa5.74□□□□□ -1.49
IST3YIR005W MRL1Q06815 381 aa5.74□□□□□ -1.49
IST3YIR005W SYP1P25623 870 aaKnown RBP5.73□□□□□ -1.49
IST3YIR005W DOM34P33309 386 aa5.73□□□□□ -1.49
IST3YIR005W SHM2P37291 469 aaKnown RBP5.73□□□□□ -1.49
IST3YIR005W RFC5P38251 354 aa5.73□□□□□ -1.49
IST3YIR005W RPS26AP39938 119 aaKnown RBP5.73□□□□□ -1.49
IST3YIR005W RPS26BP39939 119 aaKnown RBP5.73□□□□□ -1.49
IST3YIR005W CNN1P43618 361 aa5.73□□□□□ -1.49
IST3YIR005W DBP5P20449 482 aaKnown RBP5.72□□□□□ -1.49
IST3YIR005W MPT5P39016 859 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
IST3YIR005W ROT1Q03691 256 aa5.71□□□□□ -1.5
IST3YIR005W DUS4Q06063 367 aa5.71□□□□□ -1.5
IST3YIR005W TUB2P02557 457 aaKnown RBP5.7□□□□□ -1.5
IST3YIR005W GAL10P04397 699 aa5.7□□□□□ -1.5
IST3YIR005W YER152CP10356 443 aa5.7□□□□□ -1.5
IST3YIR005W KIN2P13186 1147 aaKnown RBP5.7□□□□□ -1.5
IST3YIR005W CMP2P14747 604 aa5.7□□□□□ -1.5
IST3YIR005W YFL054CP43549 646 aa5.7□□□□□ -1.5
IST3YIR005W POL32P47110 350 aa5.7□□□□□ -1.5
IST3YIR005W RIB2Q12362 591 aaKnown RBP5.7□□□□□ -1.5
IST3YIR005W MLS1P30952 554 aa5.69□□□□□ -1.5
IST3YIR005W YJR107WP47145 328 aa5.69□□□□□ -1.5
IST3YIR005W PLB2Q03674 706 aa5.69□□□□□ -1.5
IST3YIR005W SIZ1Q04195 904 aa5.69□□□□□ -1.5
IST3YIR005W ATG13Q06628 738 aa5.69□□□□□ -1.5
IST3YIR005W RXT3Q07458 294 aa5.69□□□□□ -1.5
IST3YIR005W SVS1Q12254 260 aa5.69□□□□□ -1.5
IST3YIR005W GCR1P07261 785 aa5.68□□□□□ -1.5
IST3YIR005W SRM1P21827 482 aa5.68□□□□□ -1.5
IST3YIR005W MPH1P40562 993 aa5.68□□□□□ -1.5
IST3YIR005W PBP1P53297 722 aaKnown RBP5.68□□□□□ -1.5
IST3YIR005W ESF1Q06344 628 aaKnown RBP5.68□□□□□ -1.5
IST3YIR005W STE11P23561 717 aa5.67□□□□□ -1.5
IST3YIR005W MCM2P29469 868 aa5.67□□□□□ -1.5
IST3YIR005W ACK1Q07622 623 aaPredicted RBP5.67□□□□□ -1.5
IST3YIR005W GPB1Q08886 897 aa5.67□□□□□ -1.5
IST3YIR005W BAS1P22035 811 aa5.66□□□□□ -1.5
IST3YIR005W CDC20P26309 610 aa5.66□□□□□ -1.5
IST3YIR005W GNT1Q12096 491 aa5.66□□□□□ -1.5
IST3YIR005W RAD27P26793 382 aa5.65□□□□□ -1.5
IST3YIR005W APL1P27351 700 aa5.65□□□□□ -1.5
IST3YIR005W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
IST3YIR005W CDC6P09119 513 aa5.64□□□□□ -1.51
IST3YIR005W ATE1P16639 503 aa5.64□□□□□ -1.51
IST3YIR005W FYV10P40492 516 aa5.64□□□□□ -1.51
IST3YIR005W SPR28Q04921 423 aa5.64□□□□□ -1.51
IST3YIR005W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
IST3YIR005W RTT10Q08924 1013 aa5.64□□□□□ -1.51
IST3YIR005W TRM2P33753 639 aa5.63□□□□□ -1.51
IST3YIR005W RER2P35196 286 aa5.63□□□□□ -1.51
IST3YIR005W MCM7P38132 845 aa5.63□□□□□ -1.51
IST3YIR005W RRT14P40470 206 aa5.63□□□□□ -1.51
IST3YIR005W VPS62P53285 467 aa5.63□□□□□ -1.51
IST3YIR005W TIF35Q04067 274 aaKnown RBP5.63□□□□□ -1.51
IST3YIR005W RRP15Q06511 250 aaPredicted RBP5.63□□□□□ -1.51
IST3YIR005W ACM1Q08981 209 aa5.63□□□□□ -1.51
IST3YIR005W PNS1Q12412 539 aa5.63□□□□□ -1.51
IST3YIR005W ACE2P21192 770 aa5.62□□□□□ -1.51
IST3YIR005W UGA2P38067 497 aa5.62□□□□□ -1.51
IST3YIR005W MNN10P50108 393 aaKnown RBP5.62□□□□□ -1.51
IST3YIR005W RMD1Q03441 430 aa5.62□□□□□ -1.51
IST3YIR005W MSC2Q03455 724 aa5.62□□□□□ -1.51
IST3YIR005W TMA10Q06177 86 aa5.62□□□□□ -1.51
IST3YIR005W TMA46Q12000 345 aaKnown RBP5.62□□□□□ -1.51
IST3YIR005W THS1P04801 734 aaKnown RBP5.61□□□□□ -1.51
IST3YIR005W LST4P34239 828 aa5.61□□□□□ -1.51
IST3YIR005W YAP6Q03935 383 aa5.61□□□□□ -1.51
IST3YIR005W URN1Q06525 465 aaKnown RBP5.61□□□□□ -1.51
IST3YIR005W RPL11AP0C0W9 174 aaKnown RBP5.6□□□□□ -1.51
IST3YIR005W HCM1P25364 564 aa5.6□□□□□ -1.51
IST3YIR005W GEM1P39722 662 aa5.6□□□□□ -1.51
IST3YIR005W HMI1Q12039 706 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 76.3 ms