RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT6	YGR116W	SWI4	P25302	1093 aa	Known RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	PAP1	P29468	568 aa	Known RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	TMA22	P47089	198 aa	Predicted RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	MDR1	P53258	950 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	NAF1	P53919	492 aa	Known RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	UFD2	P54860	961 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	MAK10	Q02197	733 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	ARO80	Q04052	950 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	URH1	Q04179	340 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	SEY1	Q99287	776 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	OM45	P16547	393 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	STE13	P33894	931 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	ALG2	P43636	503 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	DAS1	P47005	663 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	VPS16	Q03308	798 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	SOV1	Q04748	898 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	ATG17	Q06410	417 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	INP54	Q08227	384 aa	Known RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	GNT1	Q12096	491 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	PWP1	P21304	576 aa	Known RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	RER2	P35196	286 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	GCN20	P43535	752 aa	Known RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	BRO1	P48582	844 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	NDL1	Q06568	189 aa		3.98	□□□□□ -1.77
SPT6	YGR116W	GPN2	Q08726	347 aa	Predicted RBP	3.98	□□□□□ -1.77
SPT6	YGR116W	ARG4	P04076	463 aa	Predicted RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	NAT1	P12945	854 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	GFA1	P14742	717 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	TYR1	P20049	452 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	PRP5	P21372	849 aa	Predicted RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	VAN1	P23642	535 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	PDC6	P26263	563 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	NAM7	P30771	971 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	MRE11	P32829	692 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	LAM1	P38851	1228 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	VID27	P40157	782 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	YMR147W	P40218	223 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	TOF1	P53840	1238 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	SUB1	P54000	292 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	YPL109C	Q02981	657 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	TRS120	Q04183	1289 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	YOR296W	Q08748	1289 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	PDR1	P12383	1068 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	MAK11	P20484	414 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	YCR051W	P25631	222 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	HXT1	P32465	570 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	NIP1	P32497	812 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	TOA1	P32773	286 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	LHS1	P36016	881 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	PIH1	P38768	344 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	IES1	P43579	692 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	YNL193W	P53870	558 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	EEB1	Q02891	456 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	VMA4	P22203	233 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	ILV6	P25605	309 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	HIR1	P32479	840 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	GCG1	P32656	232 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	SHM1	P37292	490 aa	Predicted RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	SAP185	P40856	1058 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	MDJ2	P42834	146 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	YBP2	P53169	641 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	DSL1	P53847	754 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	MAG2	Q06436	670 aa	Known RBP	3.97	□□□□□ -1.77
SPT6	YGR116W	YAP7	Q08182	245 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	OCA6	Q12454	224 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	TCB1	Q12466	1186 aa		3.97	□□□□□ -1.77
SPT6	YGR116W	PRI1	P10363	409 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	SEC18	P18759	758 aa	Known RBP	3.96	□□□□□ -1.77
SPT6	YGR116W	SIN4	P32259	974 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	NUF2	P33895	451 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	SAK1	P38990	1142 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	HFM1	P51979	1187 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	GTB1	Q04924	702 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	YLR001C	Q07895	862 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	NCA2	Q12374	616 aa		3.96	□□□□□ -1.77
SPT6	YGR116W	ADH4	P10127	382 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	CBF2	P32504	956 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	YME1	P32795	747 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	MAL31	P38156	614 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	IRC8	P47046	822 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	CPR6	P53691	371 aa	Known RBP	3.96	□□□□□ -1.78
SPT6	YGR116W	GRX3	Q03835	250 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	ECI1	Q05871	280 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	PIG1	Q06216	648 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	FKS3	Q04952	1785 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	PPR1	P07272	904 aa	Predicted RBP	3.96	□□□□□ -1.78
SPT6	YGR116W	RPC53	P25441	422 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	EFT1	P32324	842 aa	Known RBP	3.96	□□□□□ -1.78
SPT6	YGR116W	NPL4	P33755	580 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	GEF1	P37020	779 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	TDA11	P38854	504 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	HOP2	P53187	214 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	YLR177W	Q06251	628 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	LAM4	P38800	1345 aa		3.96	□□□□□ -1.78
SPT6	YGR116W	POL3	P15436	1097 aa		3.95	□□□□□ -1.78
SPT6	YGR116W	TUP1	P16649	713 aa		3.95	□□□□□ -1.78
SPT6	YGR116W	ALG1	P16661	449 aa		3.95	□□□□□ -1.78
SPT6	YGR116W	JNM1	P36224	373 aa		3.95	□□□□□ -1.78
SPT6	YGR116W	UGA2	P38067	497 aa		3.95	□□□□□ -1.78
SPT6	YGR116W	BEM4	P39011	633 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms