RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeastyeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC55YGL190C SYP1P25623 870 aaKnown RBP4.31□□□□□ -1.72
CDC55YGL190C RER2P35196 286 aa4.31□□□□□ -1.72
CDC55YGL190C MPH1P40562 993 aa4.31□□□□□ -1.72
CDC55YGL190C PRP43P53131 767 aaKnown RBP4.31□□□□□ -1.72
CDC55YGL190C MRPL22P53881 309 aa4.31□□□□□ -1.72
CDC55YGL190C HOS3Q02959 697 aaKnown RBP4.31□□□□□ -1.72
CDC55YGL190C YPL260WQ08977 551 aa4.31□□□□□ -1.72
CDC55YGL190C DBP5P20449 482 aaKnown RBP4.31□□□□□ -1.72
CDC55YGL190C MLS1P30952 554 aa4.31□□□□□ -1.72
CDC55YGL190C RPN3P40016 523 aaKnown RBP4.31□□□□□ -1.72
CDC55YGL190C CNN1P43618 361 aa4.31□□□□□ -1.72
CDC55YGL190C TNA1P53322 534 aa4.31□□□□□ -1.72
CDC55YGL190C COQ4O13525 335 aa4.3□□□□□ -1.72
CDC55YGL190C PRP6P19735 899 aaPredicted RBP4.3□□□□□ -1.72
CDC55YGL190C ASF1P32447 279 aa4.3□□□□□ -1.72
CDC55YGL190C PEP7P32609 515 aa4.3□□□□□ -1.72
CDC55YGL190C AIM3P38266 947 aaKnown RBP4.3□□□□□ -1.72
CDC55YGL190C RGD1P38339 666 aa4.3□□□□□ -1.72
CDC55YGL190C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72 RIP-Chip
CDC55YGL190C EEB1Q02891 456 aa4.3□□□□□ -1.72
CDC55YGL190C TIF35Q04067 274 aaKnown RBP4.3□□□□□ -1.72
CDC55YGL190C RTT10Q08924 1013 aa4.3□□□□□ -1.72
CDC55YGL190C PIK1P39104 1066 aa4.29□□□□□ -1.72
CDC55YGL190C RMD1Q03441 430 aa4.29□□□□□ -1.72
CDC55YGL190C SPS1P08458 490 aa4.28□□□□□ -1.72
CDC55YGL190C CCZ1P38273 704 aa4.28□□□□□ -1.72
CDC55YGL190C RIB2Q12362 591 aaKnown RBP4.28□□□□□ -1.72
CDC55YGL190C CDC34P14682 295 aa4.27□□□□□ -1.73
CDC55YGL190C TAF1P46677 1066 aa4.27□□□□□ -1.73
CDC55YGL190C NBA1Q08229 501 aaKnown RBP4.27□□□□□ -1.73
CDC55YGL190C YPL066WQ12194 479 aa4.27□□□□□ -1.73
CDC55YGL190C TRP2P00899 507 aaKnown RBP4.27□□□□□ -1.73
CDC55YGL190C YPL277CQ08989 487 aa4.27□□□□□ -1.73
CDC55YGL190C SRM1P21827 482 aa4.26□□□□□ -1.73
CDC55YGL190C DBP2P24783 546 aaKnown RBP4.26□□□□□ -1.73
CDC55YGL190C PUF4P25339 888 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
CDC55YGL190C SNO2P53823 222 aa4.26□□□□□ -1.73
CDC55YGL190C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
CDC55YGL190C YDR132CQ03900 495 aa4.26□□□□□ -1.73
CDC55YGL190C PET112P33893 541 aa4.25□□□□□ -1.73
CDC55YGL190C FLR1P38124 548 aa4.25□□□□□ -1.73
CDC55YGL190C MET10P39692 1035 aa4.25□□□□□ -1.73
CDC55YGL190C MXR1P40029 184 aa4.25□□□□□ -1.73
CDC55YGL190C SEC26P41810 973 aaKnown RBP4.25□□□□□ -1.73
CDC55YGL190C HNT2P49775 206 aa4.25□□□□□ -1.73
CDC55YGL190C FOL2P51601 243 aaKnown RBP4.25□□□□□ -1.73
CDC55YGL190C RIM8P53179 542 aa4.25□□□□□ -1.73
CDC55YGL190C ESC8Q08119 714 aa4.25□□□□□ -1.73
CDC55YGL190C CYC1P00044 109 aaPredicted RBP4.24□□□□□ -1.73
CDC55YGL190C SOD2P00447 233 aa4.24□□□□□ -1.73
CDC55YGL190C LYP1P32487 611 aa4.24□□□□□ -1.73
CDC55YGL190C MOT2P34909 587 aaKnown RBP4.24□□□□□ -1.73
CDC55YGL190C MCM7P38132 845 aa4.24□□□□□ -1.73
CDC55YGL190C RPS13P05756 151 aaKnown RBP4.23□□□□□ -1.73
CDC55YGL190C RPL11AP0C0W9 174 aaKnown RBP4.23□□□□□ -1.73
CDC55YGL190C BAS1P22035 811 aa4.23□□□□□ -1.73
CDC55YGL190C YCR015CP25616 317 aa4.23□□□□□ -1.73
CDC55YGL190C RAD27P26793 382 aa4.23□□□□□ -1.73
CDC55YGL190C PLB2Q03674 706 aa4.23□□□□□ -1.73
CDC55YGL190C ESC2Q06340 456 aa4.23□□□□□ -1.73
CDC55YGL190C RSB1Q08417 382 aa4.23□□□□□ -1.73
CDC55YGL190C TMA46Q12000 345 aaKnown RBP4.23□□□□□ -1.73
CDC55YGL190C GNT1Q12096 491 aa4.23□□□□□ -1.73
CDC55YGL190C RPL11BQ3E757 174 aaPredicted RBP4.23□□□□□ -1.73
CDC55YGL190C SLA2P33338 968 aa4.23□□□□□ -1.73
CDC55YGL190C PNT1P38969 423 aa4.23□□□□□ -1.73
CDC55YGL190C FAA4P47912 694 aaKnown RBP4.23□□□□□ -1.73
CDC55YGL190C INO1P11986 533 aa4.22□□□□□ -1.73
CDC55YGL190C TOD6P34219 525 aa4.22□□□□□ -1.73
CDC55YGL190C MNR2P35724 969 aa4.22□□□□□ -1.73
CDC55YGL190C SIP5P40210 489 aaKnown RBP4.22□□□□□ -1.73
CDC55YGL190C ENV11P53246 860 aa4.22□□□□□ -1.73
CDC55YGL190C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
CDC55YGL190C DUS4Q06063 367 aa4.22□□□□□ -1.73
CDC55YGL190C SGD1Q06132 899 aa4.22□□□□□ -1.73
CDC55YGL190C ATG13Q06628 738 aa4.22□□□□□ -1.73
CDC55YGL190C AIM44Q99299 758 aa4.22□□□□□ -1.73
CDC55YGL190C BI4P03879 638 aa4.21□□□□□ -1.74
CDC55YGL190C UGA2P38067 497 aa4.21□□□□□ -1.74
CDC55YGL190C LAM1P38851 1228 aa4.21□□□□□ -1.74
CDC55YGL190C MEF2P39677 819 aa4.21□□□□□ -1.74
CDC55YGL190C TYW3P53177 273 aa4.21□□□□□ -1.74
CDC55YGL190C YGR053CP53234 283 aa4.21□□□□□ -1.74
CDC55YGL190C SVS1Q12254 260 aa4.21□□□□□ -1.74
CDC55YGL190C GAL10P04397 699 aa4.2□□□□□ -1.74
CDC55YGL190C RFC5P38251 354 aa4.2□□□□□ -1.74
CDC55YGL190C GCN5Q03330 439 aa4.2□□□□□ -1.74
CDC55YGL190C ROT1Q03691 256 aa4.2□□□□□ -1.74
CDC55YGL190C YLR225CQ05948 407 aaKnown RBP4.2□□□□□ -1.74
CDC55YGL190C CDC6P09119 513 aa4.19□□□□□ -1.74
CDC55YGL190C CMP2P14747 604 aa4.19□□□□□ -1.74
CDC55YGL190C ACE2P21192 770 aa4.19□□□□□ -1.74
CDC55YGL190C PRE10P21242 288 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
CDC55YGL190C GIP4P39732 760 aa4.19□□□□□ -1.74
CDC55YGL190C MTC3P53077 123 aa4.19□□□□□ -1.74
CDC55YGL190C SIZ1Q04195 904 aa4.19□□□□□ -1.74
CDC55YGL190C ACM1Q08981 209 aa4.19□□□□□ -1.74
CDC55YGL190C YKL222CP35995 705 aa4.19□□□□□ -1.74
CDC55YGL190C YKL151CP36059 337 aa4.19□□□□□ -1.74
CDC55YGL190C YGL176CP46945 554 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms