RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W SIW14P53965 281 aa5.39□□□□□ -1.55
RSM28YDR494W RAT1Q02792 1006 aaKnown RBP5.39□□□□□ -1.55
RSM28YDR494W SPO21Q12411 609 aa5.39□□□□□ -1.55
RSM28YDR494W MKK2P32491 506 aa5.38□□□□□ -1.55
RSM28YDR494W ENT3P47160 408 aa5.38□□□□□ -1.55
RSM28YDR494W SEC8P32855 1065 aa5.37□□□□□ -1.55
RSM28YDR494W ABZ1P37254 787 aaPredicted RBP5.37□□□□□ -1.55
RSM28YDR494W HXT13P39924 564 aa5.37□□□□□ -1.55
RSM28YDR494W SEC26P41810 973 aaKnown RBP5.37□□□□□ -1.55
RSM28YDR494W GNP1P48813 663 aa5.37□□□□□ -1.55
RSM28YDR494W HXT17P53631 564 aa5.37□□□□□ -1.55
RSM28YDR494W HXT15P54854 567 aa5.37□□□□□ -1.55
RSM28YDR494W RSB1Q08417 382 aa5.37□□□□□ -1.55
RSM28YDR494W PUF4P25339 888 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
RSM28YDR494W MGE1P38523 228 aa5.36□□□□□ -1.55
RSM28YDR494W POL32P47110 350 aa5.36□□□□□ -1.55
RSM28YDR494W YDR132CQ03900 495 aa5.36□□□□□ -1.55
RSM28YDR494W SGD1Q06132 899 aa5.36□□□□□ -1.55
RSM28YDR494W PRE10P21242 288 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
RSM28YDR494W MCM2P29469 868 aa5.35□□□□□ -1.55
RSM28YDR494W LAM1P38851 1228 aa5.35□□□□□ -1.55
RSM28YDR494W HNT2P49775 206 aa5.35□□□□□ -1.55
RSM28YDR494W CLU1Q03690 1277 aaKnown RBP5.35□□□□□ -1.55
RSM28YDR494W MRL1Q06815 381 aa5.35□□□□□ -1.55
RSM28YDR494W YOR352WQ08816 343 aa5.35□□□□□ -1.55
RSM28YDR494W CYC1P00044 109 aaPredicted RBP5.34□□□□□ -1.55
RSM28YDR494W GCR1P07261 785 aa5.34□□□□□ -1.55
RSM28YDR494W ATE1P16639 503 aa5.34□□□□□ -1.55
RSM28YDR494W RGD1P38339 666 aa5.34□□□□□ -1.55
RSM28YDR494W MEF2P39677 819 aa5.34□□□□□ -1.55
RSM28YDR494W YFL054CP43549 646 aa5.34□□□□□ -1.55
RSM28YDR494W NOP8Q08287 484 aaPredicted RBP5.34□□□□□ -1.55
RSM28YDR494W YLR358CO13565 187 aa5.33□□□□□ -1.56
RSM28YDR494W SYP1P25623 870 aaKnown RBP5.33□□□□□ -1.56
RSM28YDR494W YJR107WP47145 328 aa5.33□□□□□ -1.56
RSM28YDR494W GCN5Q03330 439 aa5.33□□□□□ -1.56
RSM28YDR494W YER152CP10356 443 aa5.32□□□□□ -1.56
RSM28YDR494W MLS1P30952 554 aa5.32□□□□□ -1.56
RSM28YDR494W CNN1P43618 361 aa5.32□□□□□ -1.56
RSM28YDR494W SPT20P50875 604 aa5.32□□□□□ -1.56
RSM28YDR494W SPR28Q04921 423 aa5.32□□□□□ -1.56
RSM28YDR494W DBP5P20449 482 aaKnown RBP5.31□□□□□ -1.56
RSM28YDR494W FYV10P40492 516 aa5.31□□□□□ -1.56
RSM28YDR494W PLB2Q03674 706 aa5.31□□□□□ -1.56
RSM28YDR494W ROT1Q03691 256 aa5.31□□□□□ -1.56
RSM28YDR494W RRP15Q06511 250 aaPredicted RBP5.31□□□□□ -1.56
RSM28YDR494W RFC5P38251 354 aa5.3□□□□□ -1.56
RSM28YDR494W RSM24Q03976 319 aa5.3□□□□□ -1.56
RSM28YDR494W DUS4Q06063 367 aa5.3□□□□□ -1.56
RSM28YDR494W SRM1P21827 482 aa5.29□□□□□ -1.56
RSM28YDR494W CTS1P29029 562 aa5.29□□□□□ -1.56
RSM28YDR494W SHM2P37291 469 aaKnown RBP5.29□□□□□ -1.56
RSM28YDR494W MPH1P40562 993 aa5.29□□□□□ -1.56
RSM28YDR494W GAL10P04397 699 aa5.28□□□□□ -1.56
RSM28YDR494W CMP2P14747 604 aa5.28□□□□□ -1.56
RSM28YDR494W RER2P35196 286 aa5.28□□□□□ -1.56
RSM28YDR494W TAT2P38967 592 aa5.28□□□□□ -1.56
RSM28YDR494W ESF1Q06344 628 aaKnown RBP5.28□□□□□ -1.56
RSM28YDR494W SVS1Q12254 260 aa5.28□□□□□ -1.56
RSM28YDR494W RIB2Q12362 591 aaKnown RBP5.28□□□□□ -1.56
RSM28YDR494W RTT10Q08924 1013 aa5.27□□□□□ -1.57
RSM28YDR494W RAD27P26793 382 aa5.26□□□□□ -1.57
RSM28YDR494W DOM34P33309 386 aa5.26□□□□□ -1.57
RSM28YDR494W MPT5P39016 859 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
RSM28YDR494W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
RSM28YDR494W TIF35Q04067 274 aaKnown RBP5.26□□□□□ -1.57
RSM28YDR494W ATG13Q06628 738 aa5.26□□□□□ -1.57
RSM28YDR494W KIN2P13186 1147 aaKnown RBP5.25□□□□□ -1.57
RSM28YDR494W BAS1P22035 811 aa5.25□□□□□ -1.57
RSM28YDR494W HEM3P28789 327 aa5.25□□□□□ -1.57
RSM28YDR494W PEP7P32609 515 aa5.25□□□□□ -1.57
RSM28YDR494W GSF2Q04697 403 aaKnown RBP5.25□□□□□ -1.57
RSM28YDR494W CDC20P26309 610 aa5.24□□□□□ -1.57
RSM28YDR494W APL1P27351 700 aa5.24□□□□□ -1.57
RSM28YDR494W MCM7P38132 845 aa5.24□□□□□ -1.57
RSM28YDR494W MXR1P40029 184 aa5.24□□□□□ -1.57
RSM28YDR494W SIZ1Q04195 904 aa5.24□□□□□ -1.57
RSM28YDR494W ACK1Q07622 623 aaPredicted RBP5.24□□□□□ -1.57
RSM28YDR494W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
RSM28YDR494W GNT1Q12096 491 aa5.24□□□□□ -1.57
RSM28YDR494W CDC6P09119 513 aa5.23□□□□□ -1.57
RSM28YDR494W RPL11AP0C0W9 174 aaKnown RBP5.23□□□□□ -1.57
RSM28YDR494W RXT3Q07458 294 aa5.23□□□□□ -1.57
RSM28YDR494W GPB1Q08886 897 aa5.23□□□□□ -1.57
RSM28YDR494W TMA46Q12000 345 aaKnown RBP5.23□□□□□ -1.57
RSM28YDR494W RPL11BQ3E757 174 aaPredicted RBP5.23□□□□□ -1.57
RSM28YDR494W TUB2P02557 457 aaKnown RBP5.22□□□□□ -1.57
RSM28YDR494W UGA2P38067 497 aa5.22□□□□□ -1.57
RSM28YDR494W PBP1P53297 722 aaKnown RBP5.22□□□□□ -1.57
RSM28YDR494W RMD1Q03441 430 aa5.22□□□□□ -1.57
RSM28YDR494W ACE2P21192 770 aa5.21□□□□□ -1.58
RSM28YDR494W DBP2P24783 546 aaKnown RBP5.21□□□□□ -1.58
RSM28YDR494W DUT1P33317 147 aa5.21□□□□□ -1.58
RSM28YDR494W MSC2Q03455 724 aa5.21□□□□□ -1.58
RSM28YDR494W ACM1Q08981 209 aa5.21□□□□□ -1.58
RSM28YDR494W BI4P03879 638 aa5.2□□□□□ -1.58
RSM28YDR494W SLA2P33338 968 aa5.2□□□□□ -1.58
RSM28YDR494W LST4P34239 828 aa5.2□□□□□ -1.58
RSM28YDR494W PNT1P38969 423 aa5.2□□□□□ -1.58
RSM28YDR494W GEM1P39722 662 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms