RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W YDL177CQ12257 170 aa3.5□□□□□ -1.85
VPS52YDR484W YVC1Q12324 675 aa3.5□□□□□ -1.85
VPS52YDR484W RET1P22276 1149 aaKnown RBP3.5□□□□□ -1.85
VPS52YDR484W GNP1P48813 663 aa3.5□□□□□ -1.85
VPS52YDR484W ROD1Q02805 837 aa3.5□□□□□ -1.85
VPS52YDR484W CLU1Q03690 1277 aaKnown RBP3.5□□□□□ -1.85
VPS52YDR484W HRK1Q08732 759 aaKnown RBP3.5□□□□□ -1.85
VPS52YDR484W PIN2Q12057 282 aa3.5□□□□□ -1.85
VPS52YDR484W QNS1P38795 714 aaKnown RBP3.49□□□□□ -1.85
VPS52YDR484W GTS1P40956 396 aa3.49□□□□□ -1.85
VPS52YDR484W VPS16Q03308 798 aa3.49□□□□□ -1.85
VPS52YDR484W RSA3Q05942 220 aaKnown RBP3.49□□□□□ -1.85
VPS52YDR484W PTC5Q12511 572 aa3.49□□□□□ -1.85
VPS52YDR484W YLR358CO13565 187 aa3.48□□□□□ -1.85
VPS52YDR484W MKK2P32491 506 aa3.48□□□□□ -1.85
VPS52YDR484W ETP1P38748 585 aaKnown RBP3.48□□□□□ -1.85
VPS52YDR484W HXT13P39924 564 aa3.48□□□□□ -1.85
VPS52YDR484W HXT17P53631 564 aa3.48□□□□□ -1.85
VPS52YDR484W CWC24P53769 259 aa3.48□□□□□ -1.85
VPS52YDR484W HXT15P54854 567 aa3.48□□□□□ -1.85
VPS52YDR484W YLR257WQ06146 321 aaKnown RBP3.48□□□□□ -1.85
VPS52YDR484W RPS13P05756 151 aaKnown RBP3.48□□□□□ -1.85
VPS52YDR484W SYP1P25623 870 aaKnown RBP3.48□□□□□ -1.85
VPS52YDR484W ALG3P38179 458 aa3.48□□□□□ -1.85
VPS52YDR484W KRI1P42846 591 aaKnown RBP3.48□□□□□ -1.85
VPS52YDR484W YML122CQ03207 126 aa3.48□□□□□ -1.85
VPS52YDR484W TPP1Q03796 238 aa3.48□□□□□ -1.85
VPS52YDR484W AFG2P32794 780 aa3.47□□□□□ -1.85
VPS52YDR484W DUT1P33317 147 aa3.47□□□□□ -1.85
VPS52YDR484W RAT1Q02792 1006 aaKnown RBP3.47□□□□□ -1.85
VPS52YDR484W PUS7Q08647 676 aaKnown RBP3.47□□□□□ -1.85
VPS52YDR484W LYP1P32487 611 aa3.46□□□□□ -1.85
VPS52YDR484W RER2P35196 286 aa3.46□□□□□ -1.85
VPS52YDR484W RGD1P38339 666 aa3.46□□□□□ -1.85
VPS52YDR484W CNN1P43618 361 aa3.46□□□□□ -1.85
VPS52YDR484W YGR053CP53234 283 aa3.46□□□□□ -1.85
VPS52YDR484W GDE1Q02979 1223 aa3.46□□□□□ -1.85
VPS52YDR484W YPL260WQ08977 551 aa3.46□□□□□ -1.85
VPS52YDR484W DBP5P20449 482 aaKnown RBP3.46□□□□□ -1.86
VPS52YDR484W CTS1P29029 562 aa3.46□□□□□ -1.86
VPS52YDR484W TYW3P53177 273 aa3.46□□□□□ -1.86
VPS52YDR484W SPO20Q04359 397 aa3.46□□□□□ -1.86
VPS52YDR484W TRP2P00899 507 aaKnown RBP3.45□□□□□ -1.86
VPS52YDR484W KIP1P28742 1111 aa3.45□□□□□ -1.86
VPS52YDR484W SNF7P39929 240 aaKnown RBP3.45□□□□□ -1.86
VPS52YDR484W VAC8P39968 578 aa3.45□□□□□ -1.86
VPS52YDR484W FAA4P47912 694 aaKnown RBP3.45□□□□□ -1.86
VPS52YDR484W HNT2P49775 206 aa3.45□□□□□ -1.86
VPS52YDR484W FOL2P51601 243 aaKnown RBP3.45□□□□□ -1.86
VPS52YDR484W EEB1Q02891 456 aa3.45□□□□□ -1.86
VPS52YDR484W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
VPS52YDR484W TIF35Q04067 274 aaKnown RBP3.45□□□□□ -1.86
VPS52YDR484W YJL045WP47052 634 aa3.44□□□□□ -1.86
VPS52YDR484W ALD6P54115 500 aaKnown RBP3.44□□□□□ -1.86
VPS52YDR484W SPO21Q12411 609 aa3.44□□□□□ -1.86
VPS52YDR484W MCM7P38132 845 aa3.44□□□□□ -1.86
VPS52YDR484W YHL012WP38709 493 aa3.44□□□□□ -1.86
VPS52YDR484W NMD3P38861 518 aaKnown RBP3.44□□□□□ -1.86
VPS52YDR484W RPN3P40016 523 aaKnown RBP3.44□□□□□ -1.86
VPS52YDR484W SNO2P53823 222 aa3.44□□□□□ -1.86
VPS52YDR484W COQ4O13525 335 aa3.43□□□□□ -1.86
VPS52YDR484W MLS1P30952 554 aa3.43□□□□□ -1.86
VPS52YDR484W YSC84P32793 468 aa3.43□□□□□ -1.86
VPS52YDR484W MDL2P33311 773 aa3.43□□□□□ -1.86
VPS52YDR484W MPT5P39016 859 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
VPS52YDR484W MPH1P40562 993 aa3.43□□□□□ -1.86
VPS52YDR484W HOS3Q02959 697 aaKnown RBP3.43□□□□□ -1.86
VPS52YDR484W FAL1Q12099 399 aaKnown RBP3.43□□□□□ -1.86
VPS52YDR484W RKM4Q12504 494 aa3.43□□□□□ -1.86
VPS52YDR484W INO1P11986 533 aa3.42□□□□□ -1.86
VPS52YDR484W PRE10P21242 288 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
VPS52YDR484W SRO9P25567 434 aaKnown RBP3.42□□□□□ -1.86
VPS52YDR484W TNA1P53322 534 aa3.42□□□□□ -1.86
VPS52YDR484W NBA1Q08229 501 aaKnown RBP3.42□□□□□ -1.86
VPS52YDR484W GNT1Q12096 491 aa3.42□□□□□ -1.86
VPS52YDR484W WRS1Q12109 432 aaKnown RBP3.42□□□□□ -1.86
VPS52YDR484W SAM35P14693 329 aa3.42□□□□□ -1.86
VPS52YDR484W PUF4P25339 888 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
VPS52YDR484W YKL107WP34251 309 aa3.42□□□□□ -1.86
VPS52YDR484W CCZ1P38273 704 aa3.42□□□□□ -1.86
VPS52YDR484W GPB2P39717 880 aa3.42□□□□□ -1.86
VPS52YDR484W OPI10Q08202 246 aa3.42□□□□□ -1.86
VPS52YDR484W BAS1P22035 811 aa3.41□□□□□ -1.86
VPS52YDR484W AGP1P25376 633 aa3.41□□□□□ -1.86
VPS52YDR484W PIN4P34217 668 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
VPS52YDR484W MOT2P34909 587 aaKnown RBP3.41□□□□□ -1.86
VPS52YDR484W YER152CP10356 443 aa3.4□□□□□ -1.86
VPS52YDR484W SBA1P28707 216 aaKnown RBP3.4□□□□□ -1.86
VPS52YDR484W BAP2P38084 609 aa3.4□□□□□ -1.86
VPS52YDR484W YGL176CP46945 554 aa3.4□□□□□ -1.86
VPS52YDR484W YLR225CQ05948 407 aaKnown RBP3.4□□□□□ -1.86
VPS52YDR484W SPP382Q06411 708 aaPredicted RBP3.4□□□□□ -1.86
VPS52YDR484W PUS9Q12069 462 aa3.4□□□□□ -1.86
VPS52YDR484W PRI2P20457 528 aa3.4□□□□□ -1.87
VPS52YDR484W PIK1P39104 1066 aa3.4□□□□□ -1.87
VPS52YDR484W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
VPS52YDR484W SHE9Q04172 456 aa3.4□□□□□ -1.87
VPS52YDR484W RSB1Q08417 382 aa3.4□□□□□ -1.87
VPS52YDR484W SSF2Q12153 453 aaPredicted RBP3.4□□□□□ -1.87
VPS52YDR484W ABD1P32783 436 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms