RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MSE1P48525 536 aa5.94□□□□□ -1.46
RPN9YDR427W RPT1P33299 467 aaKnown RBP5.93□□□□□ -1.46
RPN9YDR427W TNA1P53322 534 aa5.93□□□□□ -1.46
RPN9YDR427W HOS3Q02959 697 aaKnown RBP5.93□□□□□ -1.46
RPN9YDR427W ROT1Q03691 256 aa5.93□□□□□ -1.46
RPN9YDR427W RCL1Q08096 367 aaPredicted RBP5.93□□□□□ -1.46
RPN9YDR427W HXK1P04806 485 aaKnown RBP5.92□□□□□ -1.46
RPN9YDR427W KIP1P28742 1111 aa5.92□□□□□ -1.46
RPN9YDR427W BAP2P38084 609 aa5.92□□□□□ -1.46
RPN9YDR427W MGE1P38523 228 aa5.92□□□□□ -1.46
RPN9YDR427W PIK1P39104 1066 aa5.92□□□□□ -1.46
RPN9YDR427W OXR1Q08952 273 aa5.92□□□□□ -1.46
RPN9YDR427W YPT53P36019 220 aa5.91□□□□□ -1.46
RPN9YDR427W RDH54P38086 958 aa5.91□□□□□ -1.46
RPN9YDR427W DUS4Q06063 367 aa5.91□□□□□ -1.46
RPN9YDR427W STE11P23561 717 aa5.9□□□□□ -1.46
RPN9YDR427W HCM1P25364 564 aa5.9□□□□□ -1.46
RPN9YDR427W YPL109CQ02981 657 aa5.9□□□□□ -1.46
RPN9YDR427W ADI1Q03677 179 aa5.9□□□□□ -1.46
RPN9YDR427W RSM24Q03976 319 aa5.9□□□□□ -1.46
RPN9YDR427W RXT3Q07458 294 aa5.9□□□□□ -1.46
RPN9YDR427W HEM13P11353 328 aaKnown RBP5.89□□□□□ -1.47
RPN9YDR427W FAA3P39002 694 aa5.89□□□□□ -1.47
RPN9YDR427W MNN10P50108 393 aaKnown RBP5.89□□□□□ -1.47
RPN9YDR427W YGL140CP53120 1219 aa5.89□□□□□ -1.47
RPN9YDR427W YGR122WP53272 402 aa5.89□□□□□ -1.47
RPN9YDR427W EST2Q06163 884 aa5.89□□□□□ -1.47
RPN9YDR427W PTC5Q12511 572 aa5.89□□□□□ -1.47
RPN9YDR427W SEC8P32855 1065 aa5.88□□□□□ -1.47
RPN9YDR427W GPB2P39717 880 aa5.88□□□□□ -1.47
RPN9YDR427W PLB2Q03674 706 aa5.88□□□□□ -1.47
RPN9YDR427W MCM2P29469 868 aa5.87□□□□□ -1.47
RPN9YDR427W RPN3P40016 523 aaKnown RBP5.87□□□□□ -1.47
RPN9YDR427W FYV10P40492 516 aa5.87□□□□□ -1.47
RPN9YDR427W MCM6P53091 1017 aaKnown RBP5.87□□□□□ -1.47
RPN9YDR427W PBP1P53297 722 aaKnown RBP5.87□□□□□ -1.47
RPN9YDR427W ACK1Q07622 623 aaPredicted RBP5.87□□□□□ -1.47
RPN9YDR427W CDC20P26309 610 aa5.86□□□□□ -1.47
RPN9YDR427W AFG2P32794 780 aa5.86□□□□□ -1.47
RPN9YDR427W RFC5P38251 354 aa5.86□□□□□ -1.47
RPN9YDR427W TMA10Q06177 86 aa5.86□□□□□ -1.47
RPN9YDR427W GAL10P04397 699 aa5.85□□□□□ -1.47
RPN9YDR427W CYC8P14922 966 aa5.85□□□□□ -1.47
RPN9YDR427W PMI40P29952 429 aaKnown RBP5.85□□□□□ -1.47
RPN9YDR427W RPS26AP39938 119 aaKnown RBP5.85□□□□□ -1.47
RPN9YDR427W RPS26BP39939 119 aaKnown RBP5.85□□□□□ -1.47
RPN9YDR427W PIC2P40035 300 aa5.85□□□□□ -1.47
RPN9YDR427W SUN4P53616 420 aa5.85□□□□□ -1.47
RPN9YDR427W GPB1Q08886 897 aa5.85□□□□□ -1.47
RPN9YDR427W YPL260WQ08977 551 aa5.85□□□□□ -1.47
RPN9YDR427W RAD2P07276 1031 aa5.84□□□□□ -1.47
RPN9YDR427W CMP2P14747 604 aa5.84□□□□□ -1.47
RPN9YDR427W SEC23P15303 768 aaKnown RBP5.84□□□□□ -1.47
RPN9YDR427W SNF5P18480 905 aa5.84□□□□□ -1.47
RPN9YDR427W LST4P34239 828 aa5.84□□□□□ -1.47
RPN9YDR427W AIM21P40563 679 aa5.84□□□□□ -1.47
RPN9YDR427W OYE2Q03558 400 aaKnown RBP5.84□□□□□ -1.47
RPN9YDR427W SPR28Q04921 423 aa5.84□□□□□ -1.47
RPN9YDR427W NTO1Q12311 748 aa5.84□□□□□ -1.47
RPN9YDR427W SPO21Q12411 609 aa5.84□□□□□ -1.47
RPN9YDR427W PRE9P23638 258 aaKnown RBP5.83□□□□□ -1.48
RPN9YDR427W ALG3P38179 458 aa5.83□□□□□ -1.48
RPN9YDR427W SLI1P53304 468 aa5.83□□□□□ -1.48
RPN9YDR427W CTF4Q01454 927 aa5.83□□□□□ -1.48
RPN9YDR427W RMD1Q03441 430 aa5.83□□□□□ -1.48
RPN9YDR427W MCD1Q12158 566 aa5.83□□□□□ -1.48
RPN9YDR427W KIN2P13186 1147 aaKnown RBP5.82□□□□□ -1.48
RPN9YDR427W MRPS18P42847 217 aa5.82□□□□□ -1.48
RPN9YDR427W DED1P06634 604 aaKnown RBP5.8□□□□□ -1.48
RPN9YDR427W TAF13P11747 167 aa5.8□□□□□ -1.48
RPN9YDR427W SNU71P53207 620 aaKnown RBP5.8□□□□□ -1.48
RPN9YDR427W SRM1P21827 482 aa5.79□□□□□ -1.48
RPN9YDR427W ESF1Q06344 628 aaKnown RBP5.79□□□□□ -1.48
RPN9YDR427W CDC6P09119 513 aa5.78□□□□□ -1.48
RPN9YDR427W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
RPN9YDR427W RAD53P22216 821 aa5.77□□□□□ -1.49
RPN9YDR427W SVS1Q12254 260 aa5.77□□□□□ -1.49
RPN9YDR427W PAM1P37304 830 aaKnown RBP5.76□□□□□ -1.49
RPN9YDR427W GNP1P48813 663 aa5.76□□□□□ -1.49
RPN9YDR427W PHO23P50947 330 aa5.76□□□□□ -1.49
RPN9YDR427W VPS62P53285 467 aa5.76□□□□□ -1.49
RPN9YDR427W SVF1Q05515 481 aa5.76□□□□□ -1.49
RPN9YDR427W YLR224WQ05947 369 aa5.76□□□□□ -1.49
RPN9YDR427W PMA1P05030 918 aaKnown RBP5.75□□□□□ -1.49
RPN9YDR427W APL1P27351 700 aa5.75□□□□□ -1.49
RPN9YDR427W PEP7P32609 515 aa5.75□□□□□ -1.49
RPN9YDR427W GTF1P53260 183 aaPredicted RBP5.75□□□□□ -1.49
RPN9YDR427W YML122CQ03207 126 aa5.75□□□□□ -1.49
RPN9YDR427W YAP6Q03935 383 aa5.75□□□□□ -1.49
RPN9YDR427W RIB2Q12362 591 aaKnown RBP5.75□□□□□ -1.49
RPN9YDR427W GCR1P07261 785 aa5.74□□□□□ -1.49
RPN9YDR427W CHS7P38843 316 aa5.74□□□□□ -1.49
RPN9YDR427W ROD1Q02805 837 aa5.74□□□□□ -1.49
RPN9YDR427W SIZ1Q04195 904 aa5.74□□□□□ -1.49
RPN9YDR427W DCG1P32460 244 aa5.73□□□□□ -1.49
RPN9YDR427W ENT3P47160 408 aa5.73□□□□□ -1.49
RPN9YDR427W SIW14P53965 281 aa5.73□□□□□ -1.49
RPN9YDR427W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
RPN9YDR427W RAT1Q02792 1006 aaKnown RBP5.73□□□□□ -1.49
RPN9YDR427W NOP12Q08208 459 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms