RNA–Protein interactions for RNA: YDL155W

CLB3, Transcript of B-type cyclin involved in cell cycle progression, yeast

Gene CLB3, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLB3	YDL155W	RSM26	P47141	266 aa		4.97	□□□□□ -1.61
CLB3	YDL155W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
CLB3	YDL155W	SVF1	Q05515	481 aa		4.97	□□□□□ -1.61
CLB3	YDL155W	LAP2	Q10740	671 aa		4.97	□□□□□ -1.61
CLB3	YDL155W	HEM13	P11353	328 aa	Known RBP	4.96	□□□□□ -1.62
CLB3	YDL155W	VMA4	P22203	233 aa	Known RBP	4.96	□□□□□ -1.62
CLB3	YDL155W	YSC84	P32793	468 aa		4.96	□□□□□ -1.62
CLB3	YDL155W	SQT1	P35184	431 aa		4.96	□□□□□ -1.62
CLB3	YDL155W	PEX28	P38848	579 aa		4.96	□□□□□ -1.62
CLB3	YDL155W	IOC4	Q04213	475 aa		4.96	□□□□□ -1.62
CLB3	YDL155W	JIP5	Q06214	492 aa	Predicted RBP	4.96	□□□□□ -1.62
CLB3	YDL155W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
CLB3	YDL155W	SPS1	P08458	490 aa		4.95	□□□□□ -1.62
CLB3	YDL155W	RDH54	P38086	958 aa		4.95	□□□□□ -1.62
CLB3	YDL155W	MET10	P39692	1035 aa		4.95	□□□□□ -1.62
CLB3	YDL155W	TUB2	P02557	457 aa	Known RBP	4.94	□□□□□ -1.62
CLB3	YDL155W	YGL140C	P53120	1219 aa		4.94	□□□□□ -1.62
CLB3	YDL155W	GCR1	P07261	785 aa		4.93	□□□□□ -1.62
CLB3	YDL155W	SEC23	P15303	768 aa	Known RBP	4.93	□□□□□ -1.62
CLB3	YDL155W	AFG2	P32794	780 aa		4.93	□□□□□ -1.62
CLB3	YDL155W	SPT20	P50875	604 aa		4.93	□□□□□ -1.62
CLB3	YDL155W	GCN5	Q03330	439 aa		4.93	□□□□□ -1.62
CLB3	YDL155W	SGD1	Q06132	899 aa		4.93	□□□□□ -1.62
CLB3	YDL155W	PET112	P33893	541 aa		4.92	□□□□□ -1.62
CLB3	YDL155W	ADD66	P36040	267 aa		4.92	□□□□□ -1.62
CLB3	YDL155W	ATG14	P38270	344 aa		4.92	□□□□□ -1.62
CLB3	YDL155W	LAM1	P38851	1228 aa		4.92	□□□□□ -1.62
CLB3	YDL155W	TAT2	P38967	592 aa		4.92	□□□□□ -1.62
CLB3	YDL155W	RKM2	Q03942	479 aa		4.92	□□□□□ -1.62
CLB3	YDL155W	TCB3	Q03640	1545 aa	Known RBP	4.92	□□□□□ -1.62
CLB3	YDL155W	CYC1	P00044	109 aa	Predicted RBP	4.91	□□□□□ -1.62
CLB3	YDL155W	DUT1	P33317	147 aa		4.91	□□□□□ -1.62
CLB3	YDL155W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
CLB3	YDL155W	MEF2	P39677	819 aa		4.91	□□□□□ -1.62
CLB3	YDL155W	GPB2	P39717	880 aa		4.91	□□□□□ -1.62
CLB3	YDL155W	VPS53	P47061	822 aa		4.91	□□□□□ -1.62
CLB3	YDL155W	GNP1	P48813	663 aa		4.91	□□□□□ -1.62
CLB3	YDL155W	VPS16	Q03308	798 aa		4.91	□□□□□ -1.62
CLB3	YDL155W	NBA1	Q08229	501 aa	Known RBP	4.91	□□□□□ -1.62
CLB3	YDL155W	PIN2	Q12057	282 aa		4.91	□□□□□ -1.62
CLB3	YDL155W	KIP1	P28742	1111 aa		4.9	□□□□□ -1.63
CLB3	YDL155W	MNR2	P35724	969 aa		4.9	□□□□□ -1.63
CLB3	YDL155W	PLB2	Q03674	706 aa		4.9	□□□□□ -1.63
CLB3	YDL155W	MRL1	Q06815	381 aa		4.9	□□□□□ -1.63
CLB3	YDL155W	SPO21	Q12411	609 aa		4.9	□□□□□ -1.63
CLB3	YDL155W	TAD3	Q9URQ3	322 aa		4.9	□□□□□ -1.63
CLB3	YDL155W	BAP2	P38084	609 aa		4.89	□□□□□ -1.63
CLB3	YDL155W	MAD1	P40957	749 aa		4.89	□□□□□ -1.63
CLB3	YDL155W	ENV11	P53246	860 aa		4.89	□□□□□ -1.63
CLB3	YDL155W	ROT1	Q03691	256 aa		4.89	□□□□□ -1.63
CLB3	YDL155W	DUS4	Q06063	367 aa		4.89	□□□□□ -1.63
CLB3	YDL155W	PNS1	Q12412	539 aa		4.89	□□□□□ -1.63
CLB3	YDL155W	COQ4	O13525	335 aa		4.88	□□□□□ -1.63
CLB3	YDL155W	CDC34	P14682	295 aa		4.88	□□□□□ -1.63
CLB3	YDL155W	CLN2	P20438	545 aa		4.88	□□□□□ -1.63
CLB3	YDL155W	HXT13	P39924	564 aa		4.88	□□□□□ -1.63
CLB3	YDL155W	HXT17	P53631	564 aa		4.88	□□□□□ -1.63
CLB3	YDL155W	ALD6	P54115	500 aa	Known RBP	4.88	□□□□□ -1.63
CLB3	YDL155W	HXT15	P54854	567 aa		4.88	□□□□□ -1.63
CLB3	YDL155W	RTT10	Q08924	1013 aa		4.88	□□□□□ -1.63
CLB3	YDL155W	TAF13	P11747	167 aa		4.87	□□□□□ -1.63
CLB3	YDL155W	SNF5	P18480	905 aa		4.87	□□□□□ -1.63
CLB3	YDL155W	SEC26	P41810	973 aa	Known RBP	4.87	□□□□□ -1.63
CLB3	YDL155W	FAA4	P47912	694 aa	Known RBP	4.87	□□□□□ -1.63
CLB3	YDL155W	SIW14	P53965	281 aa		4.87	□□□□□ -1.63
CLB3	YDL155W	ROD1	Q02805	837 aa		4.87	□□□□□ -1.63
CLB3	YDL155W	EST2	Q06163	884 aa		4.87	□□□□□ -1.63
CLB3	YDL155W	YOR352W	Q08816	343 aa		4.87	□□□□□ -1.63
CLB3	YDL155W	DED1	P06634	604 aa	Known RBP	4.86	□□□□□ -1.63
CLB3	YDL155W	SRM1	P21827	482 aa		4.86	□□□□□ -1.63
CLB3	YDL155W	CCZ1	P38273	704 aa		4.86	□□□□□ -1.63
CLB3	YDL155W	VAC8	P39968	578 aa		4.86	□□□□□ -1.63
CLB3	YDL155W	TNA1	P53322	534 aa		4.86	□□□□□ -1.63
CLB3	YDL155W	SLI1	P53304	468 aa		4.85	□□□□□ -1.63
CLB3	YDL155W	CWC24	P53769	259 aa		4.85	□□□□□ -1.63
CLB3	YDL155W	EEB1	Q02891	456 aa		4.85	□□□□□ -1.63
CLB3	YDL155W	HOS3	Q02959	697 aa	Known RBP	4.85	□□□□□ -1.63
CLB3	YDL155W	GDE1	Q02979	1223 aa		4.85	□□□□□ -1.63
CLB3	YDL155W	PUS9	Q12069	462 aa		4.85	□□□□□ -1.63
CLB3	YDL155W	PTC5	Q12511	572 aa		4.85	□□□□□ -1.63
CLB3	YDL155W	GAL10	P04397	699 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	DOM34	P33309	386 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	TRM2	P33753	639 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	RER2	P35196	286 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	ALG3	P38179	458 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	PIK1	P39104	1066 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	YFL054C	P43549	646 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	HNT2	P49775	206 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	YGR053C	P53234	283 aa		4.84	□□□□□ -1.63
CLB3	YDL155W	RAT1	Q02792	1006 aa	Known RBP	4.84	□□□□□ -1.63
CLB3	YDL155W	RIB2	Q12362	591 aa	Known RBP	4.84	□□□□□ -1.63
CLB3	YDL155W	CDC6	P09119	513 aa		4.83	□□□□□ -1.64
CLB3	YDL155W	RAD27	P26793	382 aa		4.83	□□□□□ -1.64
CLB3	YDL155W	MKK2	P32491	506 aa		4.83	□□□□□ -1.64
CLB3	YDL155W	LST4	P34239	828 aa		4.83	□□□□□ -1.64
CLB3	YDL155W	ENT3	P47160	408 aa		4.83	□□□□□ -1.64
CLB3	YDL155W	TMA46	Q12000	345 aa	Known RBP	4.83	□□□□□ -1.64
CLB3	YDL155W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
CLB3	YDL155W	CDC20	P26309	610 aa		4.82	□□□□□ -1.64
CLB3	YDL155W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms