RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W UBP15P50101 1230 aa2.2□□□□□ -2.06
USO1YDL058W PEX14P53112 341 aa2.2□□□□□ -2.06
USO1YDL058W PRO2P54885 456 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W FDC1Q03034 503 aa2.2□□□□□ -2.06
USO1YDL058W CWC15Q03772 175 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W YFH1Q07540 174 aa2.2□□□□□ -2.06
USO1YDL058W HAA1Q12753 694 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W NHA1Q99271 985 aa2.2□□□□□ -2.06
USO1YDL058W OCA4P25366 362 aa2.2□□□□□ -2.06
USO1YDL058W SEC66P33754 206 aa2.2□□□□□ -2.06
USO1YDL058W NUP120P35729 1037 aa2.2□□□□□ -2.06
USO1YDL058W KAP104P38217 918 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W HXT5P38695 592 aa2.2□□□□□ -2.06
USO1YDL058W ARB1P40024 610 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W VPS70P47161 811 aa2.2□□□□□ -2.06
USO1YDL058W YGR066CP53242 292 aa2.2□□□□□ -2.06
USO1YDL058W VPS64Q03944 604 aa2.2□□□□□ -2.06
USO1YDL058W KRE28Q04431 385 aa2.2□□□□□ -2.06
USO1YDL058W DPB4Q04603 196 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W ATG38Q05789 226 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W MMR1Q06324 491 aa2.2□□□□□ -2.06
USO1YDL058W MAG2Q06436 670 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W SPO75Q07798 868 aa2.2□□□□□ -2.06
USO1YDL058W LAP2Q10740 671 aa2.2□□□□□ -2.06
USO1YDL058W VIK1Q12045 647 aa2.2□□□□□ -2.06
USO1YDL058W GAL2P13181 574 aa2.19□□□□□ -2.06
USO1YDL058W PHO81P17442 1178 aa2.19□□□□□ -2.06
USO1YDL058W UGA3P26370 528 aa2.19□□□□□ -2.06
USO1YDL058W GUT1P32190 709 aa2.19□□□□□ -2.06
USO1YDL058W YBL036CP38197 257 aa2.19□□□□□ -2.06
USO1YDL058W POP7P38291 140 aa2.19□□□□□ -2.06
USO1YDL058W FMC1P40491 155 aa2.19□□□□□ -2.06
USO1YDL058W AIM23P47015 356 aa2.19□□□□□ -2.06
USO1YDL058W GPI8P49018 411 aa2.19□□□□□ -2.06
USO1YDL058W HNT2P49775 206 aa2.19□□□□□ -2.06
USO1YDL058W PXR1P53335 271 aaPredicted RBP2.19□□□□□ -2.06
USO1YDL058W BOP3P53958 396 aa2.19□□□□□ -2.06
USO1YDL058W VTA1Q06263 330 aa2.19□□□□□ -2.06
USO1YDL058W RGA2Q06407 1009 aa2.19□□□□□ -2.06
USO1YDL058W OXR1Q08952 273 aa2.19□□□□□ -2.06
USO1YDL058W MAS1P10507 462 aa2.19□□□□□ -2.06
USO1YDL058W SEC23P15303 768 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W MSB1P21339 1137 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W VPS3P23643 1011 aa2.19□□□□□ -2.06
USO1YDL058W PHO87P25360 923 aa2.19□□□□□ -2.06
USO1YDL058W HSP104P31539 908 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W VAM7P32912 316 aa2.19□□□□□ -2.06
USO1YDL058W PMT1P33775 817 aa2.19□□□□□ -2.06
USO1YDL058W PIN4P34217 668 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
USO1YDL058W FES1P38260 290 aa2.19□□□□□ -2.06
USO1YDL058W ERP2P39704 215 aa2.19□□□□□ -2.06
USO1YDL058W ECM1P39715 212 aa2.19□□□□□ -2.06
USO1YDL058W VTC2P43585 828 aa2.19□□□□□ -2.06
USO1YDL058W CSN12P47130 423 aa2.19□□□□□ -2.06
USO1YDL058W RIM21P48565 533 aa2.19□□□□□ -2.06
USO1YDL058W NUP84P52891 726 aa2.19□□□□□ -2.06
USO1YDL058W HDA1P53973 706 aa2.19□□□□□ -2.06
USO1YDL058W DID2P69771 204 aa2.19□□□□□ -2.06
USO1YDL058W MEH1Q02205 184 aa2.19□□□□□ -2.06
USO1YDL058W SRL4Q03085 281 aa2.19□□□□□ -2.06
USO1YDL058W ATG13Q06628 738 aa2.19□□□□□ -2.06
USO1YDL058W IRC3Q06683 689 aa2.19□□□□□ -2.06
USO1YDL058W VIP1Q06685 1146 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W MSB4Q12317 492 aa2.19□□□□□ -2.06
USO1YDL058W CMR1Q12510 522 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W TAF2P23255 1407 aa2.19□□□□□ -2.06
USO1YDL058W OLE1P21147 510 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W MCM4P30665 933 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W MRPL36P36531 177 aa2.19□□□□□ -2.06
USO1YDL058W TPA1P40032 644 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W RIC1P40395 1056 aa2.19□□□□□ -2.06
USO1YDL058W ATG36P46983 293 aa2.19□□□□□ -2.06
USO1YDL058W MDV1P47025 714 aa2.19□□□□□ -2.06
USO1YDL058W IBD2P53892 351 aa2.19□□□□□ -2.06
USO1YDL058W EOS1P53938 366 aa2.19□□□□□ -2.06
USO1YDL058W ASI3P53983 676 aa2.19□□□□□ -2.06
USO1YDL058W FIN1Q03898 291 aa2.19□□□□□ -2.06
USO1YDL058W APC4Q04601 652 aa2.19□□□□□ -2.06
USO1YDL058W HCR1Q05775 265 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W ADE13Q05911 482 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W MRD1Q06106 887 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W VPS36Q06696 566 aa2.19□□□□□ -2.06
USO1YDL058W ATG11Q12527 1178 aa2.19□□□□□ -2.06
USO1YDL058W ADF1Q2V2Q1 113 aa2.19□□□□□ -2.06
USO1YDL058W DFR1P07807 211 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
USO1YDL058W ART10P18634 518 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W CMK1P27466 446 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W MRF1P30775 413 aaPredicted RBP2.19□□□□□ -2.06
USO1YDL058W NDI1P32340 513 aa2.19□□□□□ -2.06
USO1YDL058W TIF3P34167 436 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W YKL023WP36103 277 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W YBR138CP38277 524 aa2.19□□□□□ -2.06
USO1YDL058W SRP72P38688 640 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W TIF4632P39936 914 aaKnown RBP2.19□□□□□ -2.06
USO1YDL058W PXA1P41909 870 aa2.19□□□□□ -2.06
USO1YDL058W TEL2P53038 688 aa2.19□□□□□ -2.06
USO1YDL058W SPP382Q06411 708 aaPredicted RBP2.19□□□□□ -2.06
USO1YDL058W RSC3Q06639 885 aa2.19□□□□□ -2.06
USO1YDL058W SHS1Q07657 551 aa2.19□□□□□ -2.06
USO1YDL058W GLN1P32288 370 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms