RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YML122CQ03207 126 aa3.36□□□□□ -1.87
MCD1YDL003W DED1P06634 604 aaKnown RBP3.36□□□□□ -1.87
MCD1YDL003W KIN2P13186 1147 aaKnown RBP3.36□□□□□ -1.87
MCD1YDL003W STE11P23561 717 aa3.36□□□□□ -1.87
MCD1YDL003W BAP2P38084 609 aa3.36□□□□□ -1.87
MCD1YDL003W YGL140CP53120 1219 aa3.36□□□□□ -1.87
MCD1YDL003W PMI40P29952 429 aaKnown RBP3.35□□□□□ -1.87
MCD1YDL003W NTO1Q12311 748 aa3.35□□□□□ -1.87
MCD1YDL003W LST4P34239 828 aa3.34□□□□□ -1.87
MCD1YDL003W RDH54P38086 958 aa3.34□□□□□ -1.87
MCD1YDL003W GTF1P53260 183 aaPredicted RBP3.34□□□□□ -1.87
MCD1YDL003W SLI1P53304 468 aa3.34□□□□□ -1.87
MCD1YDL003W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
MCD1YDL003W HAT1Q12341 374 aa3.34□□□□□ -1.87
MCD1YDL003W SEC23P15303 768 aaKnown RBP3.33□□□□□ -1.88
MCD1YDL003W APL1P27351 700 aa3.33□□□□□ -1.88
MCD1YDL003W ALG3P38179 458 aa3.33□□□□□ -1.88
MCD1YDL003W RPN3P40016 523 aaKnown RBP3.33□□□□□ -1.88
MCD1YDL003W PHO23P50947 330 aa3.33□□□□□ -1.88
MCD1YDL003W ADI1Q03677 179 aa3.33□□□□□ -1.88
MCD1YDL003W YPL260WQ08977 551 aa3.33□□□□□ -1.88
MCD1YDL003W SSA1P10591 642 aaKnown RBP3.33□□□□□ -1.88
MCD1YDL003W AFG2P32794 780 aa3.33□□□□□ -1.88
MCD1YDL003W SNF5P18480 905 aa3.32□□□□□ -1.88
MCD1YDL003W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
MCD1YDL003W SVS1Q12254 260 aa3.31□□□□□ -1.88
MCD1YDL003W SRM1P21827 482 aa3.3□□□□□ -1.88
MCD1YDL003W YLR224WQ05947 369 aa3.3□□□□□ -1.88
MCD1YDL003W PHO4P07270 312 aaKnown RBP3.3□□□□□ -1.88
MCD1YDL003W HEM13P11353 328 aaKnown RBP3.3□□□□□ -1.88
MCD1YDL003W RAD53P22216 821 aa3.3□□□□□ -1.88
MCD1YDL003W YAP6Q03935 383 aa3.3□□□□□ -1.88
MCD1YDL003W PMA1P05030 918 aaKnown RBP3.29□□□□□ -1.88
MCD1YDL003W YHL050CP38721 697 aa3.29□□□□□ -1.88
MCD1YDL003W YHR219WP38900 624 aa3.29□□□□□ -1.88
MCD1YDL003W GCV2P49095 1034 aa3.29□□□□□ -1.88
MCD1YDL003W YPL109CQ02981 657 aa3.29□□□□□ -1.88
MCD1YDL003W EMC1P25574 760 aa3.28□□□□□ -1.88
MCD1YDL003W DAK2P43550 591 aa3.28□□□□□ -1.88
MCD1YDL003W CDC6P09119 513 aa3.27□□□□□ -1.89
MCD1YDL003W PRE9P23638 258 aaKnown RBP3.27□□□□□ -1.89
MCD1YDL003W DCG1P32460 244 aa3.27□□□□□ -1.89
MCD1YDL003W UBA2P52488 636 aa3.27□□□□□ -1.89
MCD1YDL003W VPS62P53285 467 aa3.27□□□□□ -1.89
MCD1YDL003W TAF13P11747 167 aa3.27□□□□□ -1.89
MCD1YDL003W DEF1P35732 738 aaKnown RBP3.27□□□□□ -1.89
MCD1YDL003W MSS4P38994 779 aa3.27□□□□□ -1.89
MCD1YDL003W PLB1P39105 664 aa3.27□□□□□ -1.89
MCD1YDL003W IOC3P43596 787 aa3.27□□□□□ -1.89
MCD1YDL003W AIM39Q08223 395 aa3.27□□□□□ -1.89
MCD1YDL003W CHS7P38843 316 aa3.26□□□□□ -1.89
MCD1YDL003W THI12P42883 340 aa3.26□□□□□ -1.89
MCD1YDL003W THI5P43534 340 aa3.26□□□□□ -1.89
MCD1YDL003W YFL054CP43549 646 aa3.26□□□□□ -1.89
MCD1YDL003W THI11P47183 340 aa3.26□□□□□ -1.89
MCD1YDL003W KIN4Q01919 800 aa3.26□□□□□ -1.89
MCD1YDL003W THI13Q07748 340 aa3.26□□□□□ -1.89
MCD1YDL003W NOP12Q08208 459 aaKnown RBP3.26□□□□□ -1.89
MCD1YDL003W PPM2Q08282 695 aa3.26□□□□□ -1.89
MCD1YDL003W PEP7P32609 515 aa3.25□□□□□ -1.89
MCD1YDL003W RAT1Q02792 1006 aaKnown RBP3.25□□□□□ -1.89
MCD1YDL003W ROD1Q02805 837 aa3.25□□□□□ -1.89
MCD1YDL003W TOS4Q06266 489 aa3.25□□□□□ -1.89
MCD1YDL003W HMI1Q12039 706 aa3.25□□□□□ -1.89
MCD1YDL003W RGD1P38339 666 aa3.24□□□□□ -1.89
MCD1YDL003W FAA3P39002 694 aa3.24□□□□□ -1.89
MCD1YDL003W PIC2P40035 300 aa3.24□□□□□ -1.89
MCD1YDL003W RIB2Q12362 591 aaKnown RBP3.24□□□□□ -1.89
MCD1YDL003W YER152CP10356 443 aa3.24□□□□□ -1.89
MCD1YDL003W MLS1P30952 554 aa3.24□□□□□ -1.89
MCD1YDL003W OAR1P35731 278 aa3.24□□□□□ -1.89
MCD1YDL003W MRPS18P42847 217 aa3.24□□□□□ -1.89
MCD1YDL003W MET4P32389 672 aa3.23□□□□□ -1.89
MCD1YDL003W MKK2P32491 506 aa3.23□□□□□ -1.89
MCD1YDL003W GEF1P37020 779 aa3.23□□□□□ -1.89
MCD1YDL003W SIP5P40210 489 aaKnown RBP3.23□□□□□ -1.89
MCD1YDL003W MSC2Q03455 724 aa3.23□□□□□ -1.89
MCD1YDL003W SIZ1Q04195 904 aa3.23□□□□□ -1.89
MCD1YDL003W HXK1P04806 485 aaKnown RBP3.22□□□□□ -1.89
MCD1YDL003W ENA1P13587 1091 aa3.22□□□□□ -1.89
MCD1YDL003W PFK1P16861 987 aaKnown RBP3.22□□□□□ -1.89
MCD1YDL003W BAS1P22035 811 aa3.22□□□□□ -1.89
MCD1YDL003W HRR25P29295 494 aaKnown RBP3.22□□□□□ -1.89
MCD1YDL003W RPT1P33299 467 aaKnown RBP3.22□□□□□ -1.89
MCD1YDL003W POA1P38218 177 aa3.22□□□□□ -1.89
MCD1YDL003W ENA2Q01896 1091 aa3.22□□□□□ -1.89
MCD1YDL003W ATG13Q06628 738 aa3.22□□□□□ -1.89
MCD1YDL003W TPO1Q07824 586 aa3.22□□□□□ -1.89
MCD1YDL003W MCD1Q12158 566 aa3.22□□□□□ -1.89
MCD1YDL003W ENA5Q12691 1091 aa3.22□□□□□ -1.89
MCD1YDL003W SYP1P25623 870 aaKnown RBP3.22□□□□□ -1.89
MCD1YDL003W MOH1P38191 138 aa3.22□□□□□ -1.89
MCD1YDL003W SIW14P53965 281 aa3.22□□□□□ -1.89
MCD1YDL003W RPP2AP05319 106 aaKnown RBP3.21□□□□□ -1.9
MCD1YDL003W SEC8P32855 1065 aa3.21□□□□□ -1.9
MCD1YDL003W ZRG8P40021 1076 aa3.21□□□□□ -1.9
MCD1YDL003W MND2P40577 368 aa3.21□□□□□ -1.9
MCD1YDL003W CNN1P43618 361 aa3.21□□□□□ -1.9
MCD1YDL003W ENT3P47160 408 aa3.21□□□□□ -1.9
MCD1YDL003W THS1P04801 734 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms