RNA–Protein interactions for RNA: YCR076C

FUB1, Transcript of Proteasome-binding protein, yeast

Gene FUB1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUB1	YCR076C	ARP6	Q12509	438 aa		10.12	□□□□□ -0.79
FUB1	YCR076C	ILV1	P00927	576 aa	Known RBP	10.11	□□□□□ -0.79
FUB1	YCR076C	SAM1	P10659	382 aa	Known RBP	10.11	□□□□□ -0.79
FUB1	YCR076C	UGA4	P32837	571 aa		10.11	□□□□□ -0.79
FUB1	YCR076C	TFG2	P41896	400 aa	Predicted RBP	10.11	□□□□□ -0.79
FUB1	YCR076C	VTC2	P43585	828 aa		10.11	□□□□□ -0.79
FUB1	YCR076C	ORC4	P54791	529 aa		10.11	□□□□□ -0.79
FUB1	YCR076C	HCR1	Q05775	265 aa	Known RBP	10.11	□□□□□ -0.79
FUB1	YCR076C	SMC6	Q12749	1114 aa		10.11	□□□□□ -0.79
FUB1	YCR076C	YEL076C-A	P0CX16	216 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	YLR464W	P0CX17	216 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	CYC8	P14922	966 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	ISY1	P21374	235 aa	Predicted RBP	10.1	□□□□□ -0.79
FUB1	YCR076C	TGL1	P34163	548 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	ISW1	P38144	1129 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	YEL076C	P39971	216 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	MFM1	Q02783	413 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	GFD1	Q04839	188 aa	Known RBP	10.1	□□□□□ -0.79
FUB1	YCR076C	YLR326W	Q06170	240 aa	Known RBP	10.1	□□□□□ -0.79
FUB1	YCR076C	YLH47	Q06493	454 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	UBX5	Q06682	500 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	TLG2	Q08144	397 aa		10.1	□□□□□ -0.79
FUB1	YCR076C	MIP1	P15801	1254 aa		10.09	□□□□□ -0.79
FUB1	YCR076C	PER1	P25625	357 aa		10.09	□□□□□ -0.79
FUB1	YCR076C	BCD1	P38772	366 aa		10.09	□□□□□ -0.79
FUB1	YCR076C	YIL089W	P40500	205 aa		10.09	□□□□□ -0.79
FUB1	YCR076C	LIF1	P53150	421 aa		10.09	□□□□□ -0.79
FUB1	YCR076C	OYE2	Q03558	400 aa	Known RBP	10.09	□□□□□ -0.79
FUB1	YCR076C	CDC37	P06101	506 aa	Known RBP	10.08	□□□□□ -0.8
FUB1	YCR076C	CKA2	P19454	339 aa		10.08	□□□□□ -0.8
FUB1	YCR076C	PSO2	P30620	661 aa		10.08	□□□□□ -0.8
FUB1	YCR076C	YET1	P35723	206 aa		10.08	□□□□□ -0.8
FUB1	YCR076C	MGA2	P40578	1113 aa		10.08	□□□□□ -0.8
FUB1	YCR076C	BRE2	P43132	505 aa		10.08	□□□□□ -0.8
FUB1	YCR076C	RRT6	P53117	311 aa	Predicted RBP	10.08	□□□□□ -0.8
FUB1	YCR076C	ALD6	P54115	500 aa	Known RBP	10.08	□□□□□ -0.8
FUB1	YCR076C	SPP382	Q06411	708 aa	Predicted RBP	10.08	□□□□□ -0.8
FUB1	YCR076C	WHI4	Q07655	649 aa	Known RBP	10.08	□□□□□ -0.8
FUB1	YCR076C	YOL075C	Q08234	1294 aa		10.08	□□□□□ -0.8
FUB1	YCR076C	RKM4	Q12504	494 aa		10.08	□□□□□ -0.8
FUB1	YCR076C	MRC1	P25588	1096 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	RAM2	P29703	316 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	SHP1	P34223	423 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	EBP2	P36049	427 aa	Known RBP	10.07	□□□□□ -0.8
FUB1	YCR076C	ROG3	P43602	733 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	PEX21	P50091	288 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	DIP5	P53388	608 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	PGA2	P53903	129 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	CTR9	P89105	1077 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	EBS1	Q03466	884 aa	Known RBP	10.07	□□□□□ -0.8
FUB1	YCR076C	SPH1	Q06160	661 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	YPL216W	Q08964	1102 aa		10.07	□□□□□ -0.8
FUB1	YCR076C	FKS1	P38631	1876 aa	Known RBP	10.06	□□□□□ -0.8
FUB1	YCR076C	UTR4	P32626	227 aa		10.06	□□□□□ -0.8
FUB1	YCR076C	YKL091C	P33324	310 aa	Known RBP	10.06	□□□□□ -0.8
FUB1	YCR076C	UBP11	P36026	717 aa		10.06	□□□□□ -0.8
FUB1	YCR076C	PIH1	P38768	344 aa		10.06	□□□□□ -0.8
FUB1	YCR076C	VAB2	P40003	282 aa		10.06	□□□□□ -0.8
FUB1	YCR076C	ULP2	P40537	1034 aa	Predicted RBP	10.06	□□□□□ -0.8
FUB1	YCR076C	AIP1	P46680	615 aa	Known RBP	10.06	□□□□□ -0.8
FUB1	YCR076C	CTR1	P49573	406 aa		10.06	□□□□□ -0.8
FUB1	YCR076C	GUP1	P53154	560 aa		10.06	□□□□□ -0.8
FUB1	YCR076C	GUD1	Q07729	489 aa		10.06	□□□□□ -0.8
FUB1	YCR076C	PDC1	P06169	563 aa	Known RBP	10.05	□□□□□ -0.8
FUB1	YCR076C	SUP45	P12385	437 aa	Known RBP	10.05	□□□□□ -0.8
FUB1	YCR076C	SSA4	P22202	642 aa	Known RBP	10.05	□□□□□ -0.8
FUB1	YCR076C	ESS1	P22696	170 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	MSH3	P25336	1018 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	MNR2	P35724	969 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	PPS1	P38148	807 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	SIP3	P38717	1229 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	STR2	P47164	639 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	VPS75	P53853	264 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	FUS2	Q05670	677 aa		10.05	□□□□□ -0.8
FUB1	YCR076C	DUS3	Q06053	668 aa	Known RBP	10.05	□□□□□ -0.8
FUB1	YCR076C	PGM1	P33401	570 aa	Known RBP	10.04	□□□□□ -0.8
FUB1	YCR076C	MFT1	P33441	392 aa	Known RBP	10.04	□□□□□ -0.8
FUB1	YCR076C	MCD4	P36051	919 aa		10.04	□□□□□ -0.8
FUB1	YCR076C	MCR1	P36060	302 aa	Known RBP	10.04	□□□□□ -0.8
FUB1	YCR076C	SAP190	P36123	1033 aa		10.04	□□□□□ -0.8
FUB1	YCR076C	SHM1	P37292	490 aa	Predicted RBP	10.04	□□□□□ -0.8
FUB1	YCR076C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	10.04	□□□□□ -0.8	not detected
FUB1	YCR076C	SPT8	P38915	602 aa		10.04	□□□□□ -0.8
FUB1	YCR076C	NUP82	P40368	713 aa		10.04	□□□□□ -0.8
FUB1	YCR076C	GPD2	P41911	440 aa	Known RBP	10.04	□□□□□ -0.8
FUB1	YCR076C	YGL039W	P53183	348 aa	Known RBP	10.04	□□□□□ -0.8
FUB1	YCR076C	TYW1	Q08960	810 aa	Known RBP	10.04	□□□□□ -0.8
FUB1	YCR076C	CLN3	P13365	580 aa		10.03	□□□□□ -0.8
FUB1	YCR076C	VMA2	P16140	517 aa	Known RBP	10.03	□□□□□ -0.8
FUB1	YCR076C	PFK1	P16861	987 aa	Known RBP	10.03	□□□□□ -0.8
FUB1	YCR076C	PHO13	P19881	312 aa		10.03	□□□□□ -0.8
FUB1	YCR076C	SEC65	P29478	273 aa		10.03	□□□□□ -0.8
FUB1	YCR076C	PXL1	P36166	706 aa		10.03	□□□□□ -0.8
FUB1	YCR076C	CTM1	P38818	585 aa		10.03	□□□□□ -0.8
FUB1	YCR076C	NET1	P47035	1189 aa		10.03	□□□□□ -0.8
FUB1	YCR076C	PTA1	Q01329	785 aa	Predicted RBP	10.03	□□□□□ -0.8
FUB1	YCR076C	RPS6A	P0CX37	236 aa	Known RBP	10.02	□□□□□ -0.81
FUB1	YCR076C	RPS6B	P0CX38	236 aa	Predicted RBP	10.02	□□□□□ -0.81
FUB1	YCR076C	IXR1	P33417	597 aa		10.02	□□□□□ -0.81
FUB1	YCR076C	RPC25	P35718	212 aa		10.02	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms