RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	RSB1	Q08417	382 aa		7.05	□□□□□ -1.28
SLX1	YBR228W	HIR3	P47171	1648 aa		7.05	□□□□□ -1.28
SLX1	YBR228W	TNA1	P53322	534 aa		7.04	□□□□□ -1.28
SLX1	YBR228W	HOS3	Q02959	697 aa	Known RBP	7.04	□□□□□ -1.28
SLX1	YBR228W	ESC8	Q08119	714 aa		7.04	□□□□□ -1.28
SLX1	YBR228W	YOR352W	Q08816	343 aa		7.04	□□□□□ -1.28
SLX1	YBR228W	PRP6	P19735	899 aa	Predicted RBP	7.03	□□□□□ -1.28
SLX1	YBR228W	SEC8	P32855	1065 aa		7.03	□□□□□ -1.28
SLX1	YBR228W	SIW14	P53965	281 aa		7.03	□□□□□ -1.28
SLX1	YBR228W	MKK2	P32491	506 aa		7.02	□□□□□ -1.29
SLX1	YBR228W	PEP7	P32609	515 aa		7.02	□□□□□ -1.29
SLX1	YBR228W	YPL260W	Q08977	551 aa		7.02	□□□□□ -1.29
SLX1	YBR228W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.01	□□□□□ -1.29	not detected
SLX1	YBR228W	THI80	P35202	319 aa		7.01	□□□□□ -1.29
SLX1	YBR228W	FYV10	P40492	516 aa		7.01	□□□□□ -1.29
SLX1	YBR228W	TOD6	P34219	525 aa		7	□□□□□ -1.29
SLX1	YBR228W	RIM8	P53179	542 aa		7	□□□□□ -1.29
SLX1	YBR228W	RPS13	P05756	151 aa	Known RBP	6.99	□□□□□ -1.29
SLX1	YBR228W	GCR1	P07261	785 aa		6.99	□□□□□ -1.29
SLX1	YBR228W	YCR015C	P25616	317 aa		6.99	□□□□□ -1.29
SLX1	YBR228W	SYP1	P25623	870 aa	Known RBP	6.98	□□□□□ -1.29
SLX1	YBR228W	PIK1	P39104	1066 aa		6.98	□□□□□ -1.29
SLX1	YBR228W	TAF1	P46677	1066 aa		6.98	□□□□□ -1.29
SLX1	YBR228W	YJR107W	P47145	328 aa		6.98	□□□□□ -1.29
SLX1	YBR228W	YPL277C	Q08989	487 aa		6.98	□□□□□ -1.29
SLX1	YBR228W	SOD2	P00447	233 aa		6.97	□□□□□ -1.29
SLX1	YBR228W	MLS1	P30952	554 aa		6.97	□□□□□ -1.29
SLX1	YBR228W	BAP2	P38084	609 aa		6.97	□□□□□ -1.29
SLX1	YBR228W	GIP4	P39732	760 aa		6.97	□□□□□ -1.29
SLX1	YBR228W	RPN3	P40016	523 aa	Known RBP	6.97	□□□□□ -1.29
SLX1	YBR228W	SEC26	P41810	973 aa	Known RBP	6.97	□□□□□ -1.29
SLX1	YBR228W	ENT3	P47160	408 aa		6.97	□□□□□ -1.29
SLX1	YBR228W	ESF1	Q06344	628 aa	Known RBP	6.97	□□□□□ -1.29
SLX1	YBR228W	SNF5	P18480	905 aa		6.96	□□□□□ -1.3
SLX1	YBR228W	RGD1	P38339	666 aa		6.96	□□□□□ -1.3
SLX1	YBR228W	HXT13	P39924	564 aa		6.96	□□□□□ -1.3
SLX1	YBR228W	YFL054C	P43549	646 aa		6.96	□□□□□ -1.3
SLX1	YBR228W	ENV11	P53246	860 aa		6.96	□□□□□ -1.3
SLX1	YBR228W	HXT17	P53631	564 aa		6.96	□□□□□ -1.3
SLX1	YBR228W	HXT15	P54854	567 aa		6.96	□□□□□ -1.3
SLX1	YBR228W	CYC1	P00044	109 aa	Predicted RBP	6.95	□□□□□ -1.3
SLX1	YBR228W	HEM3	P28789	327 aa		6.95	□□□□□ -1.3
SLX1	YBR228W	FLR1	P38124	548 aa		6.95	□□□□□ -1.3
SLX1	YBR228W	CNN1	P43618	361 aa		6.95	□□□□□ -1.3
SLX1	YBR228W	GNP1	P48813	663 aa		6.95	□□□□□ -1.3
SLX1	YBR228W	YER152C	P10356	443 aa		6.94	□□□□□ -1.3
SLX1	YBR228W	RAD27	P26793	382 aa		6.94	□□□□□ -1.3
SLX1	YBR228W	MCM7	P38132	845 aa		6.94	□□□□□ -1.3
SLX1	YBR228W	SGD1	Q06132	899 aa		6.94	□□□□□ -1.3
SLX1	YBR228W	RRP15	Q06511	250 aa	Predicted RBP	6.94	□□□□□ -1.3
SLX1	YBR228W	XRN1	P22147	1528 aa	Known RBP	6.94	□□□□□ -1.3
SLX1	YBR228W	DBP5	P20449	482 aa	Known RBP	6.93	□□□□□ -1.3
SLX1	YBR228W	SPT20	P50875	604 aa		6.93	□□□□□ -1.3
SLX1	YBR228W	NOP8	Q08287	484 aa	Predicted RBP	6.93	□□□□□ -1.3
SLX1	YBR228W	ROT1	Q03691	256 aa		6.92	□□□□□ -1.3
SLX1	YBR228W	ASF1	P32447	279 aa		6.91	□□□□□ -1.3
SLX1	YBR228W	RFC5	P38251	354 aa		6.91	□□□□□ -1.3
SLX1	YBR228W	OYE2	Q03558	400 aa	Known RBP	6.91	□□□□□ -1.3
SLX1	YBR228W	RSM24	Q03976	319 aa		6.91	□□□□□ -1.3
SLX1	YBR228W	HNT2	P49775	206 aa		6.9	□□□□□ -1.3
SLX1	YBR228W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.9	□□□□□ -1.3	not detected
SLX1	YBR228W	RTT10	Q08924	1013 aa		6.9	□□□□□ -1.3
SLX1	YBR228W	CMP2	P14747	604 aa		6.89	□□□□□ -1.31
SLX1	YBR228W	RER2	P35196	286 aa		6.89	□□□□□ -1.31
SLX1	YBR228W	LAM1	P38851	1228 aa		6.89	□□□□□ -1.31
SLX1	YBR228W	SVS1	Q12254	260 aa		6.89	□□□□□ -1.31
SLX1	YBR228W	ABZ1	P37254	787 aa	Predicted RBP	6.88	□□□□□ -1.31
SLX1	YBR228W	TIF35	Q04067	274 aa	Known RBP	6.88	□□□□□ -1.31
SLX1	YBR228W	THO2	P53552	1597 aa	Known RBP	6.87	□□□□□ -1.31
SLX1	YBR228W	BAS1	P22035	811 aa		6.87	□□□□□ -1.31
SLX1	YBR228W	MEF2	P39677	819 aa		6.87	□□□□□ -1.31
SLX1	YBR228W	MPH1	P40562	993 aa		6.87	□□□□□ -1.31
SLX1	YBR228W	GCN5	Q03330	439 aa		6.87	□□□□□ -1.31
SLX1	YBR228W	YLR358C	O13565	187 aa		6.86	□□□□□ -1.31
SLX1	YBR228W	GAL10	P04397	699 aa		6.86	□□□□□ -1.31
SLX1	YBR228W	APL1	P27351	700 aa		6.86	□□□□□ -1.31
SLX1	YBR228W	PET112	P33893	541 aa		6.86	□□□□□ -1.31
SLX1	YBR228W	YDR132C	Q03900	495 aa		6.86	□□□□□ -1.31
SLX1	YBR228W	KIN2	P13186	1147 aa	Known RBP	6.85	□□□□□ -1.31
SLX1	YBR228W	MXR1	P40029	184 aa		6.85	□□□□□ -1.31
SLX1	YBR228W	RMD1	Q03441	430 aa		6.85	□□□□□ -1.31
SLX1	YBR228W	TMA46	Q12000	345 aa	Known RBP	6.85	□□□□□ -1.31
SLX1	YBR228W	REV3	P14284	1504 aa		6.85	□□□□□ -1.31
SLX1	YBR228W	PLB2	Q03674	706 aa		6.84	□□□□□ -1.31
SLX1	YBR228W	CLU1	Q03690	1277 aa	Known RBP	6.84	□□□□□ -1.31
SLX1	YBR228W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.84	□□□□□ -1.31	not detected
SLX1	YBR228W	GNT1	Q12096	491 aa		6.84	□□□□□ -1.31
SLX1	YBR228W	BUD4	P47136	1447 aa		6.84	□□□□□ -1.32
SLX1	YBR228W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.83	□□□□□ -1.32	not detected
SLX1	YBR228W	UGA2	P38067	497 aa		6.83	□□□□□ -1.32
SLX1	YBR228W	ECM5	Q03214	1411 aa		6.83	□□□□□ -1.32
SLX1	YBR228W	TRP2	P00899	507 aa	Known RBP	6.82	□□□□□ -1.32
SLX1	YBR228W	RPL11A	P0C0W9	174 aa	Known RBP	6.82	□□□□□ -1.32
SLX1	YBR228W	MOT2	P34909	587 aa	Known RBP	6.82	□□□□□ -1.32
SLX1	YBR228W	SPP382	Q06411	708 aa	Predicted RBP	6.82	□□□□□ -1.32
SLX1	YBR228W	RIB2	Q12362	591 aa	Known RBP	6.82	□□□□□ -1.32
SLX1	YBR228W	RPL11B	Q3E757	174 aa	Predicted RBP	6.82	□□□□□ -1.32
SLX1	YBR228W	GTF1	P53260	183 aa	Predicted RBP	6.81	□□□□□ -1.32
SLX1	YBR228W	ACM1	Q08981	209 aa		6.81	□□□□□ -1.32
SLX1	YBR228W	SIN3	P22579	1536 aa		6.81	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms