RNA–Protein interactions for RNA: YBR163W

EXO5, Transcript of Mitochondrial 5'-3' exonuclease and sliding exonuclease, yeast

Gene EXO5, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO5	YBR163W	NOG1	Q02892	647 aa	Known RBP	4.65	□□□□□ -1.66
EXO5	YBR163W	KRE5	P22023	1365 aa		4.65	□□□□□ -1.67
EXO5	YBR163W	HEM3	P28789	327 aa		4.65	□□□□□ -1.67
EXO5	YBR163W	MAC1	P35192	417 aa		4.65	□□□□□ -1.67
EXO5	YBR163W	OMA1	P36163	345 aa		4.65	□□□□□ -1.67
EXO5	YBR163W	ELA1	P53861	379 aa	Predicted RBP	4.65	□□□□□ -1.67
EXO5	YBR163W	AVO1	Q08236	1176 aa		4.65	□□□□□ -1.67
EXO5	YBR163W	RAD9	P14737	1309 aa		4.64	□□□□□ -1.67
EXO5	YBR163W	RTC1	Q08281	1341 aa		4.64	□□□□□ -1.67
EXO5	YBR163W	HXK1	P04806	485 aa	Known RBP	4.64	□□□□□ -1.67
EXO5	YBR163W	TAF5	P38129	798 aa		4.64	□□□□□ -1.67
EXO5	YBR163W	RIA1	P53893	1110 aa		4.64	□□□□□ -1.67
EXO5	YBR163W	ORC1	P54784	914 aa	Predicted RBP	4.64	□□□□□ -1.67
EXO5	YBR163W	MED7	Q08278	222 aa		4.64	□□□□□ -1.67
EXO5	YBR163W	YKR073C	P36153	106 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	NEM1	P38757	446 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	PEX28	P38848	579 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	SPO74	P45819	413 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	YGR045C	P53229	120 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	YPL109C	Q02981	657 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	ADI1	Q03677	179 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	MCM2	P29469	868 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	WHI3	P34761	661 aa	Known RBP	4.63	□□□□□ -1.67
EXO5	YBR163W	ARL1	P38116	183 aa	Known RBP	4.63	□□□□□ -1.67
EXO5	YBR163W	RPS26A	P39938	119 aa	Known RBP	4.63	□□□□□ -1.67
EXO5	YBR163W	RPS26B	P39939	119 aa	Known RBP	4.63	□□□□□ -1.67
EXO5	YBR163W	MSH4	P40965	878 aa	Predicted RBP	4.63	□□□□□ -1.67
EXO5	YBR163W	MMM1	P41800	426 aa		4.63	□□□□□ -1.67
EXO5	YBR163W	MTR4	P47047	1073 aa	Known RBP	4.63	□□□□□ -1.67
EXO5	YBR163W	CYC7	P00045	113 aa		4.62	□□□□□ -1.67
EXO5	YBR163W	MSB1	P21339	1137 aa	Known RBP	4.62	□□□□□ -1.67
EXO5	YBR163W	ATG14	P38270	344 aa		4.62	□□□□□ -1.67
EXO5	YBR163W	TOS1	P38288	455 aa		4.62	□□□□□ -1.67
EXO5	YBR163W	YGR122W	P53272	402 aa		4.62	□□□□□ -1.67
EXO5	YBR163W	YNR063W	P53749	607 aa		4.62	□□□□□ -1.67
EXO5	YBR163W	RPS4A	P0CX35	261 aa	Known RBP	4.61	□□□□□ -1.67
EXO5	YBR163W	RPS4B	P0CX36	261 aa	Known RBP	4.61	□□□□□ -1.67
EXO5	YBR163W	XKS1	P42826	600 aa		4.61	□□□□□ -1.67
EXO5	YBR163W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
EXO5	YBR163W	UTP5	Q04177	643 aa	Known RBP	4.61	□□□□□ -1.67
EXO5	YBR163W	NFS1	P25374	497 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	LIP5	P32875	414 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	MRPS18	P42847	217 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	CIT3	P43635	486 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	INP52	P50942	1183 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	YGL140C	P53120	1219 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	SPR28	Q04921	423 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	RRP15	Q06511	250 aa	Predicted RBP	4.6	□□□□□ -1.67
EXO5	YBR163W	HAP1	P0CE41	1502 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	NUP192	P47054	1683 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	RAD2	P07276	1031 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	VMA4	P22203	233 aa	Known RBP	4.6	□□□□□ -1.67
EXO5	YBR163W	YAR028W	P39548	234 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	PIC2	P40035	300 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	EAR1	Q03212	550 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	TAF8	Q03750	510 aa		4.6	□□□□□ -1.67
EXO5	YBR163W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
EXO5	YBR163W	CYC8	P14922	966 aa		4.59	□□□□□ -1.67
EXO5	YBR163W	PRE9	P23638	258 aa	Known RBP	4.59	□□□□□ -1.67
EXO5	YBR163W	SEC8	P32855	1065 aa		4.59	□□□□□ -1.67
EXO5	YBR163W	SMY2	P32909	740 aa	Known RBP	4.59	□□□□□ -1.67
EXO5	YBR163W	FYV10	P40492	516 aa		4.59	□□□□□ -1.67
EXO5	YBR163W	YJR107W	P47145	328 aa		4.59	□□□□□ -1.67
EXO5	YBR163W	ALT1	P52893	592 aa		4.59	□□□□□ -1.67
EXO5	YBR163W	YNR029C	P53729	429 aa	Known RBP	4.59	□□□□□ -1.67
EXO5	YBR163W	MCD1	Q12158	566 aa		4.59	□□□□□ -1.67
EXO5	YBR163W	BCK1	Q01389	1478 aa		4.59	□□□□□ -1.67
EXO5	YBR163W	DED1	P06634	604 aa	Known RBP	4.58	□□□□□ -1.68
EXO5	YBR163W	HEM13	P11353	328 aa	Known RBP	4.58	□□□□□ -1.68
EXO5	YBR163W	ASF1	P32447	279 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	NNK1	P36003	928 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	ESL2	P36168	1195 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	NMD3	P38861	518 aa	Known RBP	4.58	□□□□□ -1.68
EXO5	YBR163W	RCM1	P53972	490 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	SDH1	Q00711	640 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	CFT1	Q06632	1357 aa	Known RBP	4.58	□□□□□ -1.68
EXO5	YBR163W	USO1	P25386	1790 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	GCD1	P09032	578 aa	Predicted RBP	4.58	□□□□□ -1.68
EXO5	YBR163W	PEP7	P32609	515 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	OYE2	Q03558	400 aa	Known RBP	4.58	□□□□□ -1.68
EXO5	YBR163W	LAP2	Q10740	671 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	NSI1	Q12457	570 aa		4.58	□□□□□ -1.68
EXO5	YBR163W	SEC23	P15303	768 aa	Known RBP	4.57	□□□□□ -1.68
EXO5	YBR163W	RDH54	P38086	958 aa		4.57	□□□□□ -1.68
EXO5	YBR163W	BRE4	Q07660	1125 aa		4.57	□□□□□ -1.68
EXO5	YBR163W	YOR059C	Q08448	450 aa	Known RBP	4.57	□□□□□ -1.68
EXO5	YBR163W	RET1	P22276	1149 aa	Known RBP	4.56	□□□□□ -1.68
EXO5	YBR163W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	RIP-Chip
EXO5	YBR163W	ADD66	P36040	267 aa		4.56	□□□□□ -1.68
EXO5	YBR163W	HSE1	P38753	452 aa		4.56	□□□□□ -1.68
EXO5	YBR163W	CTH1	P47976	325 aa		4.56	□□□□□ -1.68
EXO5	YBR163W	TPP1	Q03796	238 aa		4.56	□□□□□ -1.68
EXO5	YBR163W	YLR257W	Q06146	321 aa	Known RBP	4.56	□□□□□ -1.68
EXO5	YBR163W	EST2	Q06163	884 aa		4.56	□□□□□ -1.68
EXO5	YBR163W	RSA3	Q05942	220 aa	Known RBP	4.55	□□□□□ -1.68
EXO5	YBR163W	MAG2	Q06436	670 aa	Known RBP	4.55	□□□□□ -1.68
EXO5	YBR163W	SPE2	P21182	396 aa		4.55	□□□□□ -1.68
EXO5	YBR163W	OYE3	P41816	400 aa	Predicted RBP	4.55	□□□□□ -1.68
EXO5	YBR163W	HDA2	Q06629	674 aa		4.55	□□□□□ -1.68
EXO5	YBR163W	PUS7	Q08647	676 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms