RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeastyeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDS1YBR029C AFG2P32794 780 aa7.61□□□□□ -1.19
CDS1YBR029C MSH4P40965 878 aaPredicted RBP7.61□□□□□ -1.19
CDS1YBR029C TPO2P53283 614 aa7.61□□□□□ -1.19
CDS1YBR029C DSE4P53753 1117 aa7.61□□□□□ -1.19
CDS1YBR029C TSR4P25040 408 aa7.6□□□□□ -1.19
CDS1YBR029C GBP2P25555 427 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
CDS1YBR029C GAR1P28007 205 aaKnown RBP7.6□□□□□ -1.19
CDS1YBR029C CDC11P32458 415 aa7.6□□□□□ -1.19
CDS1YBR029C MPH1P40562 993 aa7.6□□□□□ -1.19
CDS1YBR029C YGR045CP53229 120 aa7.6□□□□□ -1.19
CDS1YBR029C YPL066WQ12194 479 aa7.6□□□□□ -1.19
CDS1YBR029C ERS1P17261 260 aa7.59□□□□□ -1.19
CDS1YBR029C TAF8Q03750 510 aa7.59□□□□□ -1.19
CDS1YBR029C SPP382Q06411 708 aaPredicted RBP7.59□□□□□ -1.19
CDS1YBR029C GNT1Q12096 491 aa7.59□□□□□ -1.19
CDS1YBR029C YGL081WP53156 320 aa7.59□□□□□ -1.2
CDS1YBR029C ELA1P53861 379 aaPredicted RBP7.59□□□□□ -1.2
CDS1YBR029C YOR223WQ12015 292 aa7.59□□□□□ -1.2
CDS1YBR029C CCC2P38995 1004 aa7.58□□□□□ -1.2
CDS1YBR029C YPL260WQ08977 551 aa7.58□□□□□ -1.2
CDS1YBR029C QNS1P38795 714 aaKnown RBP7.57□□□□□ -1.2
CDS1YBR029C KIP3P53086 805 aaKnown RBP7.57□□□□□ -1.2
CDS1YBR029C RET1P22276 1149 aaKnown RBP7.56□□□□□ -1.2
CDS1YBR029C JJJ3P47138 172 aa7.56□□□□□ -1.2
CDS1YBR029C YJR142WP47173 342 aa7.56□□□□□ -1.2
CDS1YBR029C DOT1Q04089 582 aaKnown RBP7.56□□□□□ -1.2
CDS1YBR029C YDR306CQ06640 478 aa7.56□□□□□ -1.2
CDS1YBR029C DPH6Q12429 685 aa7.56□□□□□ -1.2
CDS1YBR029C HSV2P50079 448 aaPredicted RBP7.55□□□□□ -1.2
CDS1YBR029C RSA3Q05942 220 aaKnown RBP7.55□□□□□ -1.2
CDS1YBR029C SPO21Q12411 609 aa7.55□□□□□ -1.2
CDS1YBR029C NOP14Q99207 810 aaKnown RBP7.55□□□□□ -1.2
CDS1YBR029C AAR2P32357 355 aaPredicted RBP7.54□□□□□ -1.2
CDS1YBR029C SFP1P32432 683 aa7.54□□□□□ -1.2
CDS1YBR029C NNK1P36003 928 aa7.54□□□□□ -1.2
CDS1YBR029C GEM1P39722 662 aa7.54□□□□□ -1.2
CDS1YBR029C SIP5P40210 489 aaKnown RBP7.54□□□□□ -1.2
CDS1YBR029C RTA1P53047 317 aa7.54□□□□□ -1.2
CDS1YBR029C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
CDS1YBR029C SRM1P21827 482 aa7.53□□□□□ -1.2
CDS1YBR029C MSH2P25847 964 aa7.53□□□□□ -1.2
CDS1YBR029C KIP1P28742 1111 aa7.53□□□□□ -1.2
CDS1YBR029C BET3P36149 193 aa7.53□□□□□ -1.2
CDS1YBR029C HBN1Q96VH4 193 aa7.53□□□□□ -1.2
CDS1YBR029C TOM70P07213 617 aaKnown RBP7.52□□□□□ -1.21
CDS1YBR029C PPH3P32345 308 aa7.52□□□□□ -1.21
CDS1YBR029C RRM3P38766 723 aa7.52□□□□□ -1.21
CDS1YBR029C YLR257WQ06146 321 aaKnown RBP7.52□□□□□ -1.21
CDS1YBR029C YER152CP10356 443 aa7.51□□□□□ -1.21
CDS1YBR029C DOM34P33309 386 aa7.51□□□□□ -1.21
CDS1YBR029C DNM1P54861 757 aa7.51□□□□□ -1.21
CDS1YBR029C DUS3Q06053 668 aaKnown RBP7.51□□□□□ -1.21
CDS1YBR029C HRK1Q08732 759 aaKnown RBP7.51□□□□□ -1.21
CDS1YBR029C HBS1P32769 611 aaKnown RBP7.5□□□□□ -1.21
CDS1YBR029C SMY2P32909 740 aaKnown RBP7.5□□□□□ -1.21
CDS1YBR029C YBR284WP38150 797 aa7.5□□□□□ -1.21
CDS1YBR029C CRP1P38845 465 aaKnown RBP7.5□□□□□ -1.21
CDS1YBR029C SRP1Q02821 542 aaKnown RBP7.5□□□□□ -1.21
CDS1YBR029C UGO1Q03327 502 aa7.5□□□□□ -1.21
CDS1YBR029C HPF1Q05164 967 aa7.5□□□□□ -1.21
CDS1YBR029C GIC2Q06648 383 aa7.5□□□□□ -1.21
CDS1YBR029C NTG2Q08214 380 aa7.5□□□□□ -1.21
CDS1YBR029C ADE8P04161 214 aa7.49□□□□□ -1.21
CDS1YBR029C RPL11AP0C0W9 174 aaKnown RBP7.49□□□□□ -1.21
CDS1YBR029C TOM20P35180 183 aa7.49□□□□□ -1.21
CDS1YBR029C PNT1P38969 423 aa7.49□□□□□ -1.21
CDS1YBR029C GDH3P39708 457 aa7.49□□□□□ -1.21
CDS1YBR029C GUS1P46655 708 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
CDS1YBR029C RPL11BQ3E757 174 aaPredicted RBP7.49□□□□□ -1.21
CDS1YBR029C ADR1P07248 1323 aa7.49□□□□□ -1.21
CDS1YBR029C SSB1P11484 613 aaKnown RBP7.48□□□□□ -1.21
CDS1YBR029C GRX4P32642 244 aa7.48□□□□□ -1.21
CDS1YBR029C PEX6P33760 1030 aa7.48□□□□□ -1.21
CDS1YBR029C GPT2P36148 743 aa7.48□□□□□ -1.21
CDS1YBR029C GPB2P39717 880 aa7.48□□□□□ -1.21
CDS1YBR029C BOI2P39969 1040 aa7.48□□□□□ -1.21
CDS1YBR029C SSB2P40150 613 aaKnown RBP7.48□□□□□ -1.21
CDS1YBR029C YGR035CP53222 116 aa7.48□□□□□ -1.21
CDS1YBR029C YNR014WP53719 212 aa7.48□□□□□ -1.21
CDS1YBR029C YDL176WQ12027 708 aa7.48□□□□□ -1.21
CDS1YBR029C NCE103P53615 221 aa7.47□□□□□ -1.21
CDS1YBR029C YPR071WQ12346 211 aa7.47□□□□□ -1.21
CDS1YBR029C TOP3P13099 656 aa7.46□□□□□ -1.21
CDS1YBR029C RPN3P40016 523 aaKnown RBP7.46□□□□□ -1.21
CDS1YBR029C MXR1P40029 184 aa7.46□□□□□ -1.21
CDS1YBR029C UBP6P43593 499 aaKnown RBP7.46□□□□□ -1.21
CDS1YBR029C TY1A-NL1Q12391 440 aaKnown RBP7.46□□□□□ -1.21
CDS1YBR029C YRO2P38079 344 aa7.46□□□□□ -1.22
CDS1YBR029C NMD3P38861 518 aaKnown RBP7.46□□□□□ -1.22
CDS1YBR029C SIT1P39980 628 aa7.46□□□□□ -1.22
CDS1YBR029C HOS3Q02959 697 aaKnown RBP7.46□□□□□ -1.22
CDS1YBR029C TPP1Q03796 238 aa7.46□□□□□ -1.22
CDS1YBR029C RPL8AP17076 256 aaKnown RBP7.45□□□□□ -1.22
CDS1YBR029C GSY1P23337 708 aa7.45□□□□□ -1.22
CDS1YBR029C DBP2P24783 546 aaKnown RBP7.45□□□□□ -1.22
CDS1YBR029C UBP12P39538 1254 aa7.45□□□□□ -1.22
CDS1YBR029C SAH1P39954 449 aaKnown RBP7.45□□□□□ -1.22
CDS1YBR029C YJL045WP47052 634 aa7.45□□□□□ -1.22
CDS1YBR029C ACM1Q08981 209 aa7.45□□□□□ -1.22
CDS1YBR029C PET10P36139 283 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms