RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	HUL5	P53119	910 aa		3.16	□□□□□ -1.9
NCL1	YBL024W	HXT17	P53631	564 aa		3.16	□□□□□ -1.9
NCL1	YBL024W	HXT15	P54854	567 aa		3.16	□□□□□ -1.9
NCL1	YBL024W	RKM2	Q03942	479 aa		3.16	□□□□□ -1.9
NCL1	YBL024W	RSA3	Q05942	220 aa	Known RBP	3.16	□□□□□ -1.9
NCL1	YBL024W	TAF13	P11747	167 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	RAD4	P14736	754 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	HSP78	P33416	811 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	RDH54	P38086	958 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	YHL012W	P38709	493 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	VPS53	P47061	822 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	ECL1	P48235	211 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	EST2	Q06163	884 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	AOS1	Q06624	347 aa		3.15	□□□□□ -1.9
NCL1	YBL024W	FAL1	Q12099	399 aa	Known RBP	3.15	□□□□□ -1.9
NCL1	YBL024W	BAS1	P22035	811 aa		3.15	□□□□□ -1.91
NCL1	YBL024W	PPG1	P32838	368 aa		3.15	□□□□□ -1.91
NCL1	YBL024W	PTC7	P38797	343 aa		3.15	□□□□□ -1.91
NCL1	YBL024W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
NCL1	YBL024W	SSY1	Q03770	852 aa		3.15	□□□□□ -1.91
NCL1	YBL024W	TMA46	Q12000	345 aa	Known RBP	3.15	□□□□□ -1.91
NCL1	YBL024W	DFG16	Q99234	619 aa		3.15	□□□□□ -1.91
NCL1	YBL024W	TRP2	P00899	507 aa	Known RBP	3.14	□□□□□ -1.91
NCL1	YBL024W	DED1	P06634	604 aa	Known RBP	3.14	□□□□□ -1.91
NCL1	YBL024W	RAD27	P26793	382 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	RER2	P35196	286 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	GTS1	P40956	396 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	TIM54	P47045	478 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	FOL2	P51601	243 aa	Known RBP	3.14	□□□□□ -1.91
NCL1	YBL024W	ALG12	P53730	551 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	SIW14	P53965	281 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	ROD1	Q02805	837 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	NAN1	Q02931	896 aa	Known RBP	3.14	□□□□□ -1.91
NCL1	YBL024W	ESC2	Q06340	456 aa		3.14	□□□□□ -1.91
NCL1	YBL024W	ELM1	P32801	640 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	STE5	P32917	917 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	MDL2	P33311	773 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	SEA4	P38164	1038 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	QNS1	P38795	714 aa	Known RBP	3.13	□□□□□ -1.91
NCL1	YBL024W	NMD3	P38861	518 aa	Known RBP	3.13	□□□□□ -1.91
NCL1	YBL024W	PEX7	P39108	375 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	TYW3	P53177	273 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	PPM2	Q08282	695 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	YOR131C	Q12486	218 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	ABD1	P32783	436 aa	Predicted RBP	3.13	□□□□□ -1.91
NCL1	YBL024W	YHR020W	P38708	688 aa	Known RBP	3.13	□□□□□ -1.91
NCL1	YBL024W	OSW7	P43611	510 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
NCL1	YBL024W	PTC5	Q12511	572 aa		3.13	□□□□□ -1.91
NCL1	YBL024W	COQ4	O13525	335 aa		3.12	□□□□□ -1.91
NCL1	YBL024W	LYP1	P32487	611 aa		3.12	□□□□□ -1.91
NCL1	YBL024W	LRG1	P35688	1017 aa		3.12	□□□□□ -1.91
NCL1	YBL024W	YBR184W	P38299	523 aa		3.12	□□□□□ -1.91
NCL1	YBL024W	YJL045W	P47052	634 aa		3.12	□□□□□ -1.91
NCL1	YBL024W	PRP43	P53131	767 aa	Known RBP	3.12	□□□□□ -1.91
NCL1	YBL024W	NBA1	Q08229	501 aa	Known RBP	3.12	□□□□□ -1.91
NCL1	YBL024W	AGP1	P25376	633 aa		3.12	□□□□□ -1.91
NCL1	YBL024W	SRO9	P25567	434 aa	Known RBP	3.12	□□□□□ -1.91
NCL1	YBL024W	SEG2	P34250	1132 aa		3.12	□□□□□ -1.91
NCL1	YBL024W	RRP14	P36080	434 aa	Known RBP	3.12	□□□□□ -1.91
NCL1	YBL024W	YLR225C	Q05948	407 aa	Known RBP	3.12	□□□□□ -1.91
NCL1	YBL024W	GAS1	P22146	559 aa	Known RBP	3.11	□□□□□ -1.91
NCL1	YBL024W	MKK2	P32491	506 aa		3.11	□□□□□ -1.91
NCL1	YBL024W	MOT2	P34909	587 aa	Known RBP	3.11	□□□□□ -1.91
NCL1	YBL024W	VBA5	P36172	582 aa		3.11	□□□□□ -1.91
NCL1	YBL024W	NIT1	P40447	199 aa		3.11	□□□□□ -1.91
NCL1	YBL024W	ENT3	P47160	408 aa		3.11	□□□□□ -1.91
NCL1	YBL024W	ORC3	P54790	616 aa		3.11	□□□□□ -1.91
NCL1	YBL024W	RAT1	Q02792	1006 aa	Known RBP	3.11	□□□□□ -1.91
NCL1	YBL024W	SPO20	Q04359	397 aa		3.11	□□□□□ -1.91
NCL1	YBL024W	FLC1	Q08967	793 aa		3.11	□□□□□ -1.91
NCL1	YBL024W	INO1	P11986	533 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	RPL8B	P29453	256 aa	Known RBP	3.1	□□□□□ -1.91
NCL1	YBL024W	AIM26	P32858	118 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	TIM23	P32897	222 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	CCZ1	P38273	704 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	RSP5	P39940	809 aa	Known RBP	3.1	□□□□□ -1.91
NCL1	YBL024W	NUP82	P40368	713 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	TIF35	Q04067	274 aa	Known RBP	3.1	□□□□□ -1.91
NCL1	YBL024W	SHE9	Q04172	456 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	LPX1	Q12405	387 aa	Known RBP	3.1	□□□□□ -1.91
NCL1	YBL024W	SAM35	P14693	329 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	RNQ1	P25367	405 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	SBA1	P28707	216 aa	Known RBP	3.1	□□□□□ -1.91
NCL1	YBL024W	KIP1	P28742	1111 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	YSC84	P32793	468 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	ALG3	P38179	458 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	PFD1	P46988	109 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	YGR125W	P53273	1036 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	TNA1	P53322	534 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	FMP25	Q08023	583 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	RSB1	Q08417	382 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	YPL260W	Q08977	551 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	YPL066W	Q12194	479 aa		3.1	□□□□□ -1.91
NCL1	YBL024W	SYP1	P25623	870 aa	Known RBP	3.09	□□□□□ -1.91
NCL1	YBL024W	AFG2	P32794	780 aa		3.09	□□□□□ -1.91
NCL1	YBL024W	SPO21	Q12411	609 aa		3.09	□□□□□ -1.91
NCL1	YBL024W	MET6	P05694	767 aa	Known RBP	3.08	□□□□□ -1.92
NCL1	YBL024W	ERR1	P0CX10	437 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	ERR2	P0CX11	437 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms