RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PUF4P25339 888 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
SNC1YAL030W MRC1P25588 1096 aa2.76□□□□□ -1.97
SNC1YAL030W TRK2P28584 889 aa2.76□□□□□ -1.97
SNC1YAL030W HBS1P32769 611 aaKnown RBP2.76□□□□□ -1.97
SNC1YAL030W REI1P38344 393 aaPredicted RBP2.76□□□□□ -1.97
SNC1YAL030W PAN5P38787 379 aa2.76□□□□□ -1.97
SNC1YAL030W CRP1P38845 465 aaKnown RBP2.76□□□□□ -1.97
SNC1YAL030W YAR028WP39548 234 aa2.76□□□□□ -1.97
SNC1YAL030W GEM1P39722 662 aa2.76□□□□□ -1.97
SNC1YAL030W SIT1P39980 628 aa2.76□□□□□ -1.97
SNC1YAL030W YGL176CP46945 554 aa2.76□□□□□ -1.97
SNC1YAL030W RTS3P53289 263 aa2.76□□□□□ -1.97
SNC1YAL030W ADE12P80210 433 aaKnown RBP2.76□□□□□ -1.97
SNC1YAL030W HPF1Q05164 967 aa2.76□□□□□ -1.97
SNC1YAL030W GIC2Q06648 383 aa2.76□□□□□ -1.97
SNC1YAL030W YPL260WQ08977 551 aa2.76□□□□□ -1.97
SNC1YAL030W LAP2Q10740 671 aa2.76□□□□□ -1.97
SNC1YAL030W ELG1Q12050 791 aa2.76□□□□□ -1.97
SNC1YAL030W GPM1P00950 247 aaKnown RBP2.75□□□□□ -1.97
SNC1YAL030W PDC5P16467 563 aaKnown RBP2.75□□□□□ -1.97
SNC1YAL030W RPL8AP17076 256 aaKnown RBP2.75□□□□□ -1.97
SNC1YAL030W SAC7P17121 654 aa2.75□□□□□ -1.97
SNC1YAL030W SFP1P32432 683 aa2.75□□□□□ -1.97
SNC1YAL030W ALG3P38179 458 aa2.75□□□□□ -1.97
SNC1YAL030W PNT1P38969 423 aa2.75□□□□□ -1.97
SNC1YAL030W CCC2P38995 1004 aa2.75□□□□□ -1.97
SNC1YAL030W MBP1P39678 833 aa2.75□□□□□ -1.97
SNC1YAL030W GDH3P39708 457 aa2.75□□□□□ -1.97
SNC1YAL030W POL5P39985 1022 aaKnown RBP2.75□□□□□ -1.97
SNC1YAL030W GIP2P40036 548 aa2.75□□□□□ -1.97
SNC1YAL030W SIP5P40210 489 aaKnown RBP2.75□□□□□ -1.97
SNC1YAL030W ATG36P46983 293 aa2.75□□□□□ -1.97
SNC1YAL030W YJR008WP47085 338 aa2.75□□□□□ -1.97
SNC1YAL030W HSV2P50079 448 aaPredicted RBP2.75□□□□□ -1.97
SNC1YAL030W MAL11P53048 616 aa2.75□□□□□ -1.97
SNC1YAL030W SOK2P53438 785 aaPredicted RBP2.75□□□□□ -1.97
SNC1YAL030W PTC5Q12511 572 aa2.75□□□□□ -1.97
SNC1YAL030W HBN1Q96VH4 193 aa2.75□□□□□ -1.97
SNC1YAL030W NAR1P23503 491 aaKnown RBP2.74□□□□□ -1.97
SNC1YAL030W MLS1P30952 554 aa2.74□□□□□ -1.97
SNC1YAL030W PEX6P33760 1030 aa2.74□□□□□ -1.97
SNC1YAL030W PET10P36139 283 aa2.74□□□□□ -1.97
SNC1YAL030W ENP1P38333 483 aaKnown RBP2.74□□□□□ -1.97
SNC1YAL030W RPN3P40016 523 aaKnown RBP2.74□□□□□ -1.97
SNC1YAL030W YEN1P40028 759 aa2.74□□□□□ -1.97
SNC1YAL030W UBP6P43593 499 aaKnown RBP2.74□□□□□ -1.97
SNC1YAL030W SPO74P45819 413 aa2.74□□□□□ -1.97
SNC1YAL030W PMT3P47190 753 aa2.74□□□□□ -1.97
SNC1YAL030W ZDS1P50111 915 aaKnown RBP2.74□□□□□ -1.97
SNC1YAL030W YNR029CP53729 429 aaKnown RBP2.74□□□□□ -1.97
SNC1YAL030W SPP382Q06411 708 aaPredicted RBP2.74□□□□□ -1.97
SNC1YAL030W AVO1Q08236 1176 aa2.74□□□□□ -1.97
SNC1YAL030W MDM12Q92328 271 aa2.74□□□□□ -1.97
SNC1YAL030W ADR1P07248 1323 aa2.73□□□□□ -1.97
SNC1YAL030W TY4B-PA0A0B7P3V8 1104 aa2.73□□□□□ -1.97
SNC1YAL030W TOM70P07213 617 aaKnown RBP2.73□□□□□ -1.97
SNC1YAL030W GSY1P23337 708 aa2.73□□□□□ -1.97
SNC1YAL030W CDC12P32468 407 aaKnown RBP2.73□□□□□ -1.97
SNC1YAL030W DOM34P33309 386 aa2.73□□□□□ -1.97
SNC1YAL030W YEL1P34225 687 aa2.73□□□□□ -1.97
SNC1YAL030W MAE1P36013 669 aaKnown RBP2.73□□□□□ -1.97
SNC1YAL030W QNS1P38795 714 aaKnown RBP2.73□□□□□ -1.97
SNC1YAL030W NUG1P40010 520 aaKnown RBP2.73□□□□□ -1.97
SNC1YAL030W TED1P40533 473 aa2.73□□□□□ -1.97
SNC1YAL030W JJJ3P47138 172 aa2.73□□□□□ -1.97
SNC1YAL030W YGR045CP53229 120 aa2.73□□□□□ -1.97
SNC1YAL030W DSE4P53753 1117 aa2.73□□□□□ -1.97
SNC1YAL030W DNM1P54861 757 aa2.73□□□□□ -1.97
SNC1YAL030W TFB2Q02939 513 aa2.73□□□□□ -1.97
SNC1YAL030W YMR074CQ04773 145 aa2.73□□□□□ -1.97
SNC1YAL030W RSA3Q05942 220 aaKnown RBP2.73□□□□□ -1.97
SNC1YAL030W YDR306CQ06640 478 aa2.73□□□□□ -1.97
SNC1YAL030W YLR001CQ07895 862 aa2.73□□□□□ -1.97
SNC1YAL030W HRK1Q08732 759 aaKnown RBP2.73□□□□□ -1.97
SNC1YAL030W YOR223WQ12015 292 aa2.73□□□□□ -1.97
SNC1YAL030W YLL058WQ12198 575 aa2.73□□□□□ -1.97
SNC1YAL030W TY4A-HQ6Q5P6 413 aa2.73□□□□□ -1.97
SNC1YAL030W RPL11AP0C0W9 174 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W YER152CP10356 443 aa2.72□□□□□ -1.97
SNC1YAL030W TOP3P13099 656 aa2.72□□□□□ -1.97
SNC1YAL030W MSD1P15179 658 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W ERS1P17261 260 aa2.72□□□□□ -1.97
SNC1YAL030W MEF1P25039 761 aa2.72□□□□□ -1.97
SNC1YAL030W AAR2P32357 355 aaPredicted RBP2.72□□□□□ -1.97
SNC1YAL030W SMY2P32909 740 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W NNK1P36003 928 aa2.72□□□□□ -1.97
SNC1YAL030W PGM2P37012 569 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W YNL193WP53870 558 aa2.72□□□□□ -1.97
SNC1YAL030W SRP1Q02821 542 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W BUL2Q03758 920 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W LCD1Q04377 747 aa2.72□□□□□ -1.97
SNC1YAL030W COG8Q04632 607 aa2.72□□□□□ -1.97
SNC1YAL030W DUS3Q06053 668 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W YLR257WQ06146 321 aaKnown RBP2.72□□□□□ -1.97
SNC1YAL030W ATG13Q06628 738 aa2.72□□□□□ -1.97
SNC1YAL030W SPO21Q12411 609 aa2.72□□□□□ -1.97
SNC1YAL030W RPL11BQ3E757 174 aaPredicted RBP2.72□□□□□ -1.97
SNC1YAL030W NUP145P49687 1317 aa2.71□□□□□ -1.98
SNC1YAL030W THS1P04801 734 aaKnown RBP2.71□□□□□ -1.98
SNC1YAL030W NFS1P25374 497 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms