RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C ARL1P38116 183 aaKnown RBP15.07■□□□□ 0
SSA1YAL005C YGR125WP53273 1036 aa15.07■□□□□ 0
SSA1YAL005C KRE33P53914 1056 aaKnown RBP15.07■□□□□ 0
SSA1YAL005C CDC19P00549 500 aaKnown RBP15.06■□□□□ 0
SSA1YAL005C SDA1P53313 767 aaKnown RBP15.06■□□□□ 0
SSA1YAL005C RTC4P53850 401 aa15.06■□□□□ 0
SSA1YAL005C OYE2Q03558 400 aaKnown RBP15.06■□□□□ 0
SSA1YAL005C YLR225CQ05948 407 aaKnown RBP15.06■□□□□ 0
SSA1YAL005C ERP3Q12403 225 aa15.06■□□□□ 0
SSA1YAL005C RSM25P40496 264 aa15.05■□□□□ 0
SSA1YAL005C YAF9P53930 226 aa15.05■□□□□ 0
SSA1YAL005C PTA1Q01329 785 aaPredicted RBP15.05■□□□□ 0
SSA1YAL005C SGD1Q06132 899 aa15.05■□□□□ 0
SSA1YAL005C TY3A-GQ12173 290 aa15.05■□□□□ 0
SSA1YAL005C TY3A-IQ99219 290 aa15.05■□□□□ 0
SSA1YAL005C ILV1P00927 576 aaKnown RBP15.05■□□□□ -0
SSA1YAL005C SRP40P32583 406 aaPredicted RBP15.05■□□□□ -0
SSA1YAL005C VPS29P38759 282 aa15.05■□□□□ -0
SSA1YAL005C SES1P07284 462 aaKnown RBP15.04■□□□□ -0
SSA1YAL005C GPA1P08539 472 aa15.04■□□□□ -0
SSA1YAL005C GSY1P23337 708 aa15.04■□□□□ -0
SSA1YAL005C YER130CP39959 443 aa15.04■□□□□ -0
SSA1YAL005C RRD1P40454 393 aaKnown RBP15.04■□□□□ -0
SSA1YAL005C DAK2P43550 591 aa15.04■□□□□ -0
SSA1YAL005C SLD5Q03406 294 aa15.04■□□□□ -0
SSA1YAL005C BUL2Q03758 920 aaKnown RBP15.04■□□□□ -0
SSA1YAL005C ISA1Q07821 250 aaPredicted RBP15.04■□□□□ -0
SSA1YAL005C SRF1Q12516 437 aa15.04■□□□□ -0
SSA1YAL005C RPN12P32496 274 aa15.04■□□□□ -0
SSA1YAL005C UBP11P36026 717 aa15.04■□□□□ -0
SSA1YAL005C YPT11P48559 417 aa15.04■□□□□ -0
SSA1YAL005C YGL039WP53183 348 aaKnown RBP15.04■□□□□ -0
SSA1YAL005C MFM1Q02783 413 aa15.04■□□□□ -0
SSA1YAL005C TKL1P23254 680 aaKnown RBP15.03■□□□□ -0
SSA1YAL005C ISW1P38144 1129 aa15.03■□□□□ -0
SSA1YAL005C ATG1P53104 897 aa15.03■□□□□ -0
SSA1YAL005C CWC22P53333 577 aaKnown RBP15.03■□□□□ -0
SSA1YAL005C VMS1Q04311 632 aaKnown RBP15.03■□□□□ -0
SSA1YAL005C FKS1P38631 1876 aaKnown RBP15.03■□□□□ -0
SSA1YAL005C HIS4P00815 799 aaKnown RBP15.02■□□□□ -0
SSA1YAL005C REG2P38232 338 aa15.02■□□□□ -0
SSA1YAL005C ADY4Q05955 493 aa15.02■□□□□ -0
SSA1YAL005C TRS33Q99394 268 aa15.02■□□□□ -0
SSA1YAL005C ESS1P22696 170 aa15.02□□□□□ -0.01
SSA1YAL005C BRE2P43132 505 aa15.02□□□□□ -0.01
SSA1YAL005C TY1B-AO13527 1196 aaKnown RBP15.01□□□□□ -0.01
SSA1YAL005C BMH1P29311 267 aaKnown RBP15.01□□□□□ -0.01
SSA1YAL005C UBA2P52488 636 aa15.01□□□□□ -0.01
SSA1YAL005C YDR461C-AQ2V2P7 80 aa15.01□□□□□ -0.01
SSA1YAL005C DBP7P36120 742 aaKnown RBP15□□□□□ -0.01
SSA1YAL005C DMA2P53924 522 aa15□□□□□ -0.01
SSA1YAL005C PET10P36139 283 aa15□□□□□ -0.01
SSA1YAL005C THI6P41835 540 aa15□□□□□ -0.01
SSA1YAL005C DIP5P53388 608 aa15□□□□□ -0.01
SSA1YAL005C ETT1Q08421 412 aaKnown RBP15□□□□□ -0.01
SSA1YAL005C SMC6Q12749 1114 aa15□□□□□ -0.01
SSA1YAL005C YKT6P36015 200 aaKnown RBP14.99□□□□□ -0.01
SSA1YAL005C CBK1P53894 756 aa14.99□□□□□ -0.01
SSA1YAL005C YMR321CQ04898 105 aa14.99□□□□□ -0.01
SSA1YAL005C YLH47Q06493 454 aa14.99□□□□□ -0.01
SSA1YAL005C PSR2Q07949 397 aa14.99□□□□□ -0.01
SSA1YAL005C KNS1P32350 737 aaPredicted RBP14.98□□□□□ -0.01
SSA1YAL005C GPD2P41911 440 aaKnown RBP14.98□□□□□ -0.01
SSA1YAL005C YEL076C-AP0CX16 216 aa14.98□□□□□ -0.01
SSA1YAL005C YLR464WP0CX17 216 aa14.98□□□□□ -0.01
SSA1YAL005C NPR3P38742 1146 aa14.98□□□□□ -0.01
SSA1YAL005C YEL076CP39971 216 aa14.98□□□□□ -0.01
SSA1YAL005C CDC15P27636 974 aa14.97□□□□□ -0.01
SSA1YAL005C SUP45P12385 437 aaKnown RBP14.96□□□□□ -0.01
SSA1YAL005C YUR1P26725 428 aa14.96□□□□□ -0.01
SSA1YAL005C CLB5P30283 435 aa14.96□□□□□ -0.01
SSA1YAL005C PGM1P33401 570 aaKnown RBP14.96□□□□□ -0.01
SSA1YAL005C SCS3P53012 380 aa14.96□□□□□ -0.01
SSA1YAL005C NCS6P53088 359 aa14.96□□□□□ -0.01
SSA1YAL005C PGA2P53903 129 aa14.96□□□□□ -0.01
SSA1YAL005C FOB1O13329 566 aa14.96□□□□□ -0.02
SSA1YAL005C PRE10P21242 288 aaKnown RBP RIP-Chip data14.96□□□□□ -0.02not detected
SSA1YAL005C HIR1P32479 840 aa14.96□□□□□ -0.02
SSA1YAL005C PHM6Q05637 104 aa14.96□□□□□ -0.02
SSA1YAL005C MSC6Q08818 692 aaKnown RBP14.96□□□□□ -0.02
SSA1YAL005C PGK1P00560 416 aaKnown RBP14.95□□□□□ -0.02
SSA1YAL005C RGT1P32862 1170 aa14.95□□□□□ -0.02
SSA1YAL005C TFC4P33339 1025 aa14.95□□□□□ -0.02
SSA1YAL005C UBP15P50101 1230 aa14.95□□□□□ -0.02
SSA1YAL005C RPL22AP05749 121 aaKnown RBP14.94□□□□□ -0.02
SSA1YAL005C CKA2P19454 339 aa14.94□□□□□ -0.02
SSA1YAL005C ISY1P21374 235 aaPredicted RBP14.94□□□□□ -0.02
SSA1YAL005C SUV3P32580 737 aa14.94□□□□□ -0.02
SSA1YAL005C SEC8P32855 1065 aa14.94□□□□□ -0.02
SSA1YAL005C MXR1P40029 184 aa14.94□□□□□ -0.02
SSA1YAL005C ULP2P40537 1034 aaPredicted RBP14.94□□□□□ -0.02
SSA1YAL005C ROG3P43602 733 aa14.94□□□□□ -0.02
SSA1YAL005C CNM67P53865 581 aaKnown RBP14.94□□□□□ -0.02
SSA1YAL005C FUS2Q05670 677 aa14.94□□□□□ -0.02
SSA1YAL005C CRD1Q07560 283 aa14.94□□□□□ -0.02
SSA1YAL005C ECM29P38737 1868 aa14.94□□□□□ -0.02
SSA1YAL005C CLN3P13365 580 aa14.94□□□□□ -0.02
SSA1YAL005C SAC6P32599 642 aaKnown RBP14.93□□□□□ -0.02
SSA1YAL005C PIH1P38768 344 aa14.93□□□□□ -0.02
SSA1YAL005C FYV10P40492 516 aa14.93□□□□□ -0.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms