RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	PRR12	Q9ULL5	1215 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	BOLA1	Q9Y3E2	137 aa		3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	3.4	□□□□□ -1.87
GABRB3-223	ENST00000637293	GIGYF1	O75420	1035 aa	Predicted RBP	3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	FGR	P09769	529 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	TIE1	P35590	1138 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	CHMP4BP1	P59074	171 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	UBE4A	Q14139	1066 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	C6orf132	Q5T0Z8	1188 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	DPY19L2	Q6NUT2	758 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	USP48	Q86UV5	1035 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	FERMT3	Q86UX7	667 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	FAM174A	Q8TBP5	190 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	HELQ	Q8TDG4	1101 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	COL26A1	Q96A83	441 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	CRELD1	Q96HD1	420 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	PKNOX2	Q96KN3	472 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	PRIMPOL	Q96LW4	560 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	FAM161B	Q96MY7	647 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	MTA3	Q9BTC8	594 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	CEP126	Q9P2H0	1117 aa		3.39	□□□□□ -1.87
GABRB3-223	ENST00000637293	CFAP99	D6REC4	459 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	EXOC5	O00471	708 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	CAND2	O75155	1236 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	CDC45	O75419	566 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	NR1I2	O75469	434 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	SLC34A2	O95436	690 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	NEFM	P07197	916 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	NPR3	P17342	541 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	GCGR	P47871	477 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	CLDN10	P78369	228 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	EHHADH	Q08426	723 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	FOXD4	Q12950	439 aa	Predicted RBP	3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	HLTF	Q14527	1009 aa	Known RBP eCLIP	3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	VPS72	Q15906	364 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	ENOX2	Q16206	610 aa	Known RBP	3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	ALKBH2	Q6NS38	261 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	HS2ST1	Q7LGA3	356 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	LRP10	Q7Z4F1	713 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	C11orf96	Q7Z7L8	435 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	AMOTL1	Q8IY63	956 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	STAG1	Q8WVM7	1258 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	EVI5L	Q96CN4	794 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	CDCA7L	Q96GN5	454 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	CCDC85A	Q96PX6	553 aa	Predicted RBP	3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	SRPK1	Q96SB4	655 aa	Known RBP	3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	EYA1	Q99502	592 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	HINFP	Q9BQA5	517 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	TMEM134	Q9H6X4	195 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	PCDHGC3	Q9UN70	934 aa		3.38	□□□□□ -1.87
GABRB3-223	ENST00000637293	CCDC189	A1A4V9	331 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	NBPF26	B4DH59	902 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	ANP32C	O43423	234 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	SSB	P05455	408 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	KRT18	P05783	430 aa	Known RBP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	VIL1	P09327	827 aa	Known RBP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	ATF4	P18848	351 aa	Predicted RBP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	CALR	P27797	417 aa	Known RBP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	GNA15	P30679	374 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	GJA8	P48165	433 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	AMPD3	Q01432	767 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	POU5F1B	Q06416	359 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	SERINC3	Q13530	473 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	AAMP	Q13685	434 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	DSC3	Q14574	896 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	BRD3	Q15059	726 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	PPP2R5A	Q15172	486 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	RNF20	Q5VTR2	975 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	DESI1	Q6ICB0	168 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	PCGF5	Q86SE9	256 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	HOMER1	Q86YM7	354 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	FAM9B	Q8IZU0	186 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	SAMD3	Q8N6K7	520 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	FBF1	Q8TES7	1133 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	APPBP2	Q92624	585 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	RNPC3	Q96LT9	517 aa	Known RBP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	TRIM55	Q9BYV6	548 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	HOMER2	Q9NSB8	354 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	SEPT3	Q9UH03	358 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	FKBPL	Q9UIM3	349 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	ANAPC4	Q9UJX5	808 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	FBXO9	Q9UK97	447 aa	Predicted RBP	3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	EMILIN1	Q9Y6C2	1016 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	ERBB3	P21860	1342 aa		3.37	□□□□□ -1.87
GABRB3-223	ENST00000637293	TTLL13P	A6NNM8	815 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZBTB24	O43167	697 aa	Predicted RBP	3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	KIF4A	O95239	1232 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	PRKAR2A	P13861	404 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	MAN1A1	P33908	653 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	NOS2	P35228	1153 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	PTPN12	Q05209	780 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	KCNH2	Q12809	1159 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	NFX1	Q12986	1120 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	MTMR3	Q13615	1198 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZNF394	Q53GI3	561 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	CCDC102B	Q68D86	513 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	PPM1E	Q8WY54	764 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	ALKBH8	Q96BT7	664 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	GPRASP2	Q96D09	838 aa		3.36	□□□□□ -1.87

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