RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	CHIC1	Q5VXU3	224 aa		6.55	□□□□□ -1.36
GABRB3-223	ENST00000637293	AEBP2	Q6ZN18	517 aa	Predicted RBP	6.11	□□□□□ -1.43
GABRB3-223	ENST00000637293	SLC24A1	O60721	1099 aa		5.75	□□□□□ -1.49
GABRB3-223	ENST00000637293	PHF23	Q9BUL5	403 aa	Predicted RBP	5.75	□□□□□ -1.49
GABRB3-223	ENST00000637293	EHMT2	Q96KQ7	1210 aa		5.71	□□□□□ -1.5
GABRB3-223	ENST00000637293	PLPPR3	Q6T4P5	718 aa		5.61	□□□□□ -1.51
GABRB3-223	ENST00000637293	AMER1	Q5JTC6	1135 aa	Predicted RBP	5.42	□□□□□ -1.54
GABRB3-223	ENST00000637293	KCNA4	P22459	653 aa		5.4	□□□□□ -1.54
GABRB3-223	ENST00000637293	CSRNP3	Q8WYN3	585 aa		5.38	□□□□□ -1.55
GABRB3-223	ENST00000637293	RTN4	Q9NQC3	1192 aa	Known RBP	5.33	□□□□□ -1.56
GABRB3-223	ENST00000637293	SLC4A1AP	Q9BWU0	796 aa	Known RBP	5.29	□□□□□ -1.56
GABRB3-223	ENST00000637293	SENP3	Q9H4L4	574 aa	Predicted RBP	5.22	□□□□□ -1.57
GABRB3-223	ENST00000637293	NCBP3	Q53F19	620 aa	Known RBP	5.2	□□□□□ -1.58
GABRB3-223	ENST00000637293	ADRA2B	P18089	450 aa		5.1	□□□□□ -1.59
GABRB3-223	ENST00000637293	DAXX	Q9UER7	740 aa	Predicted RBP	5.07	□□□□□ -1.6
GABRB3-223	ENST00000637293	BCAN	Q96GW7	911 aa		5	□□□□□ -1.61
GABRB3-223	ENST00000637293	PPP4R3CP	Q6ZMV5	832 aa		4.96	□□□□□ -1.62
GABRB3-223	ENST00000637293	ARX	Q96QS3	562 aa		4.95	□□□□□ -1.62
GABRB3-223	ENST00000637293	ZBTB22	O15209	634 aa		4.94	□□□□□ -1.62
GABRB3-223	ENST00000637293	TAOK2	Q9UL54	1235 aa		4.93	□□□□□ -1.62
GABRB3-223	ENST00000637293	PLCB2	Q00722	1185 aa		4.92	□□□□□ -1.62
GABRB3-223	ENST00000637293	PRKCSH	P14314	528 aa	Predicted RBP	4.91	□□□□□ -1.62
GABRB3-223	ENST00000637293	ERICH6	Q7L0X2	663 aa		4.9	□□□□□ -1.63
GABRB3-223	ENST00000637293	NPM3	O75607	178 aa	Known RBP	4.89	□□□□□ -1.63
GABRB3-223	ENST00000637293	PPP6R1	Q9UPN7	881 aa		4.89	□□□□□ -1.63
GABRB3-223	ENST00000637293	FOXD4L1	Q9NU39	408 aa		4.88	□□□□□ -1.63
GABRB3-223	ENST00000637293	FKBP8	Q14318	412 aa		4.87	□□□□□ -1.63
GABRB3-223	ENST00000637293	HAP1	P54257	671 aa	Predicted RBP	4.86	□□□□□ -1.63
GABRB3-223	ENST00000637293	TPRN	Q4KMQ1	711 aa		4.83	□□□□□ -1.64
GABRB3-223	ENST00000637293	VSIG10	Q8N0Z9	540 aa		4.83	□□□□□ -1.64
GABRB3-223	ENST00000637293	HOMEZ	Q8IX15	550 aa		4.8	□□□□□ -1.64
GABRB3-223	ENST00000637293	TIMELESS	Q9UNS1	1208 aa		4.79	□□□□□ -1.64
GABRB3-223	ENST00000637293	TULP1	O00294	542 aa	Predicted RBP	4.78	□□□□□ -1.64
GABRB3-223	ENST00000637293	RANGAP1	P46060	587 aa	Predicted RBP	4.77	□□□□□ -1.65
GABRB3-223	ENST00000637293	CNKSR2	Q8WXI2	1034 aa		4.74	□□□□□ -1.65
GABRB3-223	ENST00000637293	GTF3C3	Q9Y5Q9	886 aa		4.74	□□□□□ -1.65
GABRB3-223	ENST00000637293	DNAJC5B	Q9UF47	199 aa		4.73	□□□□□ -1.65
GABRB3-223	ENST00000637293	ATXN8OS	P0DMR3	200 aa		4.7	□□□□□ -1.66
GABRB3-223	ENST00000637293	FOXD1	Q16676	465 aa		4.7	□□□□□ -1.66
GABRB3-223	ENST00000637293	DCAF8L2	P0C7V8	631 aa		4.69	□□□□□ -1.66
GABRB3-223	ENST00000637293	SCAF1	Q9H7N4	1312 aa	Known RBP	4.67	□□□□□ -1.66
GABRB3-223	ENST00000637293	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	4.65	□□□□□ -1.67
GABRB3-223	ENST00000637293	FBXO3	Q9UK99	471 aa		4.64	□□□□□ -1.67
GABRB3-223	ENST00000637293	TMEM132A	Q24JP5	1023 aa		4.62	□□□□□ -1.67
GABRB3-223	ENST00000637293	C14orf37	Q86TY3	774 aa		4.62	□□□□□ -1.67
GABRB3-223	ENST00000637293	KDM2A	Q9Y2K7	1162 aa		4.61	□□□□□ -1.67
GABRB3-223	ENST00000637293	NBR1	Q14596	966 aa		4.6	□□□□□ -1.67
GABRB3-223	ENST00000637293	PIAS4	Q8N2W9	510 aa	Predicted RBP	4.6	□□□□□ -1.67
GABRB3-223	ENST00000637293	BBX	Q8WY36	941 aa	Predicted RBP	4.59	□□□□□ -1.67
GABRB3-223	ENST00000637293	PODXL2	Q9NZ53	605 aa		4.58	□□□□□ -1.68
GABRB3-223	ENST00000637293	MYCN	P04198	464 aa	Predicted RBP	4.56	□□□□□ -1.68
GABRB3-223	ENST00000637293	FBLN2	P98095	1184 aa		4.56	□□□□□ -1.68
GABRB3-223	ENST00000637293	POTED	Q86YR6	584 aa		4.56	□□□□□ -1.68
GABRB3-223	ENST00000637293	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.55	□□□□□ -1.68
GABRB3-223	ENST00000637293	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.54	□□□□□ -1.68
GABRB3-223	ENST00000637293	PELP1	Q8IZL8	1130 aa	Known RBP	4.54	□□□□□ -1.68
GABRB3-223	ENST00000637293	CFAP44	Q96MT7	982 aa		4.54	□□□□□ -1.68
GABRB3-223	ENST00000637293	MYT1	Q01538	1121 aa		4.53	□□□□□ -1.68
GABRB3-223	ENST00000637293	RNF216	Q9NWF9	866 aa	Predicted RBP	4.52	□□□□□ -1.69
GABRB3-223	ENST00000637293	SPRYD3	Q8NCJ5	442 aa		4.51	□□□□□ -1.69
GABRB3-223	ENST00000637293	VASP	P50552	380 aa	Predicted RBP	4.49	□□□□□ -1.69
GABRB3-223	ENST00000637293	NPM2	Q86SE8	214 aa	Known RBP	4.49	□□□□□ -1.69
GABRB3-223	ENST00000637293	PKD2	Q13563	968 aa		4.48	□□□□□ -1.69
GABRB3-223	ENST00000637293	SLC4A2	P04920	1241 aa		4.46	□□□□□ -1.7
GABRB3-223	ENST00000637293	APLP2	Q06481	763 aa		4.46	□□□□□ -1.7
GABRB3-223	ENST00000637293	TSHZ2	Q9NRE2	1034 aa		4.45	□□□□□ -1.7
GABRB3-223	ENST00000637293	IFNLR1	Q8IU57	520 aa	Predicted RBP	4.43	□□□□□ -1.7
GABRB3-223	ENST00000637293	DNAJC5	Q9H3Z4	198 aa		4.43	□□□□□ -1.7
GABRB3-223	ENST00000637293	SUPT5H	O00267	1087 aa	Known RBP	4.42	□□□□□ -1.7
GABRB3-223	ENST00000637293	ECM2	O94769	699 aa	Predicted RBP	4.41	□□□□□ -1.7
GABRB3-223	ENST00000637293	NPM1	P06748	294 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
GABRB3-223	ENST00000637293	KLHL34	Q8N239	644 aa		4.4	□□□□□ -1.71
GABRB3-223	ENST00000637293	SPDYE4	A6NLX3	237 aa		4.38	□□□□□ -1.71
GABRB3-223	ENST00000637293	TRIM26	Q12899	539 aa	Predicted RBP	4.37	□□□□□ -1.71
GABRB3-223	ENST00000637293	PROM2	Q8N271	834 aa		4.36	□□□□□ -1.71
GABRB3-223	ENST00000637293	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	4.35	□□□□□ -1.71
GABRB3-223	ENST00000637293	HNRNPUL2	Q1KMD3	747 aa	Known RBP	4.35	□□□□□ -1.71
GABRB3-223	ENST00000637293	SPOCK2	Q92563	424 aa		4.35	□□□□□ -1.71
GABRB3-223	ENST00000637293	UBTF	P17480	764 aa	Known RBP	4.34	□□□□□ -1.71
GABRB3-223	ENST00000637293	HOXD11	P31277	338 aa	Predicted RBP	4.33	□□□□□ -1.72
GABRB3-223	ENST00000637293	SAMD1	Q6SPF0	538 aa	Predicted RBP	4.33	□□□□□ -1.72
GABRB3-223	ENST00000637293	CCDC9	Q9Y3X0	531 aa	Known RBP	4.33	□□□□□ -1.72
GABRB3-223	ENST00000637293	CHGA	P10645	457 aa	Known RBP	4.32	□□□□□ -1.72
GABRB3-223	ENST00000637293	ZBTB7C	A1YPR0	619 aa		4.31	□□□□□ -1.72
GABRB3-223	ENST00000637293	MAPK8IP2	Q13387	824 aa	Predicted RBP	4.31	□□□□□ -1.72
GABRB3-223	ENST00000637293	RGL2	O15211	777 aa		4.3	□□□□□ -1.72
GABRB3-223	ENST00000637293	HRC	P23327	699 aa		4.3	□□□□□ -1.72
GABRB3-223	ENST00000637293	BRPF1	P55201	1214 aa	Predicted RBP	4.29	□□□□□ -1.72
GABRB3-223	ENST00000637293	P3H3	Q8IVL6	736 aa		4.29	□□□□□ -1.72
GABRB3-223	ENST00000637293	ATF5	Q9Y2D1	282 aa	Predicted RBP	4.29	□□□□□ -1.72
GABRB3-223	ENST00000637293	RSPH6A	Q9H0K4	717 aa		4.28	□□□□□ -1.72
GABRB3-223	ENST00000637293	ZMYND15	Q9H091	742 aa		4.27	□□□□□ -1.73
GABRB3-223	ENST00000637293	HMGB1	P09429	215 aa	Known RBP	4.26	□□□□□ -1.73
GABRB3-223	ENST00000637293	NEUROD2	Q15784	382 aa		4.26	□□□□□ -1.73
GABRB3-223	ENST00000637293	PDIA4	P13667	645 aa	Known RBP	4.25	□□□□□ -1.73
GABRB3-223	ENST00000637293	HS6ST3	Q8IZP7	471 aa		4.25	□□□□□ -1.73
GABRB3-223	ENST00000637293	LMOD2	Q6P5Q4	547 aa		4.24	□□□□□ -1.73
GABRB3-223	ENST00000637293	ZNF219	Q9P2Y4	722 aa	Predicted RBP	4.24	□□□□□ -1.73
GABRB3-223	ENST00000637293	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
GABRB3-223	ENST00000637293	TRIM41	Q8WV44	630 aa		4.23	□□□□□ -1.73

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