RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Cyp2d11P24457 504 aa12.61□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 TnrQ8BYI9 1358 aa12.61□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Fmnl2A2APV2 1086 aa12.61□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Eif4a1P60843 406 aaKnown RBP12.61□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 DiexfQ8BTT6 772 aaKnown RBP12.61□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Slain2Q8CI08 581 aa12.61□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Ppp6r3Q922D4 844 aa12.61□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 CoilQ5SU73 570 aa12.6□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Kdm4cQ8VCD7 1054 aa12.6□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Tfip11Q9ERA6 838 aaKnown RBP12.6□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Pdia3P27773 505 aaKnown RBP12.59□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Nkx2-3P97334 362 aa12.59□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Nucb1Q02819 459 aaKnown RBP12.59□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Kcna6Q61923 529 aa12.59□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Atp8b2P98199 1209 aa12.59□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Ltbp4Q8K4G1 1666 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Mmp8O70138 465 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 EngaseQ8BX80 734 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Ppp1r42Q8R1Z4 357 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Cyp46a1Q9WVK8 500 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Simc1E9Q6E9 1354 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Col1a2Q01149 1372 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Rnf123Q5XPI3 1314 aa12.58□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Ppip5k2Q6ZQB6 1129 aa12.57□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Nsfl1cQ9CZ44 370 aaKnown RBP12.57□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Nphp1Q9QY53 687 aa12.57□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Col15a1O35206 1367 aa12.57□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Arhgef1Q61210 920 aaKnown RBP12.57□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Srgap3Q812A2 1099 aa12.57□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Atg3Q9CPX6 314 aa12.57□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Dzip1Q8BMD2 852 aa12.56□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 GorabQ8BRM2 368 aa12.56□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Farp2Q91VS8 1065 aa12.56□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Elp1Q7TT37 1333 aaKnown RBP12.56□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 1700010I14RikQ7TPG0 532 aa12.55□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Cc2d1aQ8K1A6 943 aa12.55□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Ddit3P35639 168 aa12.55□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Echdc1Q9D9V3 322 aa12.55□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Tnks1bp1P58871 1720 aa12.54□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Mcmdc2E9Q956 681 aa12.54□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Tnnt1O88346 262 aa12.54□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Hoxa7P02830 229 aa12.54□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Bcar3Q9QZK2 820 aa12.54□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Atp10bB1AWN4 1474 aa12.54□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 FocadA2AKG8 1798 aa12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Btbd11Q6GQW0 1109 aa12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Bend3Q6PAL0 825 aa12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Nol11Q8BJW5 723 aaKnown RBP12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Tmem119Q8R138 280 aa12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Adcy9P51830 1353 aa12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Zkscan2G3X952 960 aa12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Cwc27Q3TKY6 469 aa12.53□□□□□ -0.4
Cpsf3-211ENSMUST00000222968 Evi5lH3BKQ3 813 aa12.52□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Rfx1P48377 963 aa12.52□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Tns2Q8CGB6 1400 aa12.52□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Cyb5rlB1AS42 316 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Ier5O89113 308 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Ptpdc1Q6NZK8 747 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Dixdc1Q80Y83 711 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 RestQ8VIG1 1082 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Flt4P35917 1363 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 GnpatP98192 678 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Rsph3aQ3UFY4 516 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Erc2Q6PH08 957 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 TkfcQ8VC30 578 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Q9D2X8 372 aa12.51□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Ubr2Q6WKZ8 1755 aa12.5□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Nol8Q3UHX0 1147 aaKnown RBP12.5□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 4933416C03RikQ3V063 378 aa12.5□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 PsapQ61207 557 aaKnown RBP12.5□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Pdzd9Q9D9M4 266 aa12.5□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Bcl9lQ67FY2 1494 aa12.5□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Gm10471E9Q1C7 252 aa12.49□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Fkbp4P30416 458 aa12.49□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Zap70P43404 618 aa12.49□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Card10P58660 1021 aa12.49□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 OptnQ8K3K8 584 aa12.49□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 GckrQ91X44 587 aa12.49□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Abca15E9PWH4 1668 aa12.48□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 CrklP47941 303 aa12.48□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Tlr7P58681 1050 aa12.48□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 ThemisQ8BGW0 636 aa12.48□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Noc3lQ8VI84 807 aaKnown RBP12.48□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Ssh1Q76I79 1042 aa12.48□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Mrps27Q8BK72 415 aaKnown RBP12.48□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Tpx2A2APB8 745 aaKnown RBP12.47□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Exoc6bA6H5Z3 810 aa12.47□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Prune1Q8BIW1 454 aa12.47□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Rapgef3Q8VCC8 918 aa12.47□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Pdia6Q922R8 440 aaKnown RBP12.47□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Cyp27a1Q9DBG1 533 aa12.47□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Taf7Q9R1C0 341 aa12.47□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Tjp1P39447 1745 aaKnown RBP12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Zkscan16A2ALW2 728 aa12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Hmox1P14901 289 aa12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 CalcaP70160 136 aa12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Ddx17Q501J6 650 aaKnown RBP12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 HellsQ60848 821 aa12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Phkg2Q9DB30 406 aa12.46□□□□□ -0.41
Cpsf3-211ENSMUST00000222968 Irx6Q9ER75 438 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms