RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Ccdc146E9Q9F7 977 aa12.93□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Tnnt1O88346 262 aa12.93□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Dnajc10Q9DC23 793 aa12.93□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Irx6Q9ER75 438 aa12.93□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Ush1cQ9ES64 910 aa12.93□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Igsf1Q7TQA1 1317 aa12.93□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Foxp4Q9DBY0 795 aaKnown RBP12.93□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Arfgef2A2A5R2 1792 aa12.92□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Msh6P54276 1358 aaKnown RBP12.92□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Evi5lH3BKQ3 813 aa12.92□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Znf326O88291 580 aa12.92□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Tm6sf1P58749 370 aa12.92□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Fam13aQ8BGI4 693 aa12.92□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Nfat5Q9WV30 1534 aa12.92□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Slain2Q8CI08 581 aa12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Kcnh5Q920E3 988 aa12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Dnajc14Q921R4 703 aa12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 FanclQ9CR14 375 aa12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Dhx16G3X8X0 1044 aaKnown RBP12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Chpf2Q3UU43 768 aa12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Phf23Q8BSN5 401 aa12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Cc2d1aQ8K1A6 943 aa12.91□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Fmnl2A2APV2 1086 aa12.9□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Cgnl1Q6AW69 1298 aa12.9□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Ccdc94Q9D6J3 314 aa12.9□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Il4rP16382 810 aa12.9□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Cyp2d12Q8BVD2 504 aa12.9□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Kif2cQ922S8 721 aa12.9□□□□□ -0.34
Ptpre-208ENSMUST00000211788 Robo1O89026 1612 aa12.9□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Unc13bQ9Z1N9 1602 aa12.9□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Kdm6aO70546 1401 aa12.89□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Aldh8a1Q8BH00 487 aa12.89□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Smarca5Q91ZW3 1051 aaKnown RBP12.89□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Amotl1Q9D4H4 968 aa12.89□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Nek4Q9Z1J2 792 aa12.89□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Gm45140A0A0N4SUM8 220 aa12.89□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Tbc1d9Q3UYK3 1264 aa12.89□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Atf5O70191 283 aa12.88□□□□□ -0.35
Ptpre-208ENSMUST00000211788 GnpatP98192 678 aa12.88□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Fez1Q8K0X8 392 aa12.88□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Nrxn3Q6P9K9 1571 aa12.88□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Gcc1Q9D4H2 778 aa12.88□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Becn1O88597 448 aa12.87□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Dzip1Q8BMD2 852 aa12.87□□□□□ -0.35
Ptpre-208ENSMUST00000211788 GorabQ8BRM2 368 aa12.87□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Stac3Q8BZ71 360 aa12.87□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Farp2Q91VS8 1065 aa12.87□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Alpk3Q924C5 1678 aa12.86□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Nup153E9Q3G8 1462 aaKnown RBP12.86□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Gnai2P08752 355 aaKnown RBP12.85□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Gys2Q8VCB3 704 aa12.85□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Disp3A3KFU9 1347 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Mcm2P97310 904 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Ddx17Q501J6 650 aaKnown RBP12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 IbspQ61711 324 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Ppp1r37Q8BKR5 712 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Phlpp1Q8CHE4 1687 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 TnrQ8BYI9 1358 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Atg4a-psA0A0G2JFS9 396 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Srgap3Q812A2 1099 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Atg4aQ8C9S8 396 aa12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Tfip11Q9ERA6 838 aaKnown RBP12.84□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Pnpla7A2AJ88 1352 aa12.83□□□□□ -0.35
Ptpre-208ENSMUST00000211788 Gm10471E9Q1C7 252 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Eif4a1P60843 406 aaKnown RBP12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Arhgef1Q61210 920 aaKnown RBP12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Kcna6Q61923 529 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Btbd11Q6GQW0 1109 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Nkx2-3P97334 362 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Dixdc1Q80Y83 711 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Mknk2Q8CDB0 459 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Ppp1r42Q8R1Z4 357 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 CenppQ9CZ92 286 aa12.83□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Siglec1Q62230 1695 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Erbb4Q61527 1308 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Catsper2A2ARP9 588 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Gm10093D3YYI8 482 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Hdac1O09106 482 aaKnown RBP12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Cyp2d11P24457 504 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Fkbp4P30416 458 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Rps6ka5Q8C050 863 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Cyp46a1Q9WVK8 500 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Nid2O88322 1403 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Myo5bP21271 1818 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Aox2Q5SGK3 1345 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Terf2O35144 541 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Atf3Q60765 181 aa12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Nol11Q8BJW5 723 aaKnown RBP12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Gtpbp4Q99ME9 634 aaKnown RBP12.82□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Abcc12Q80WJ6 1366 aa12.81□□□□□ -0.36
Ptpre-208ENSMUST00000211788 CoilQ5SU73 570 aa12.81□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Ssh1Q76I79 1042 aa12.81□□□□□ -0.36
Ptpre-208ENSMUST00000211788 BbxQ8VBW5 907 aa12.81□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Nphp1Q9QY53 687 aa12.81□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Cwc27Q3TKY6 469 aa12.8□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Dlg5E9Q9R9 1921 aa12.8□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Gm21698A0A087WQP8 267 aa12.8□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Cnksr1A2A9K7 700 aa12.8□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Gm21671G3UY31 267 aa12.8□□□□□ -0.36
Ptpre-208ENSMUST00000211788 Bcl2l13P59017 434 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms