RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Capn2O08529 700 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Prl7d1P04769 244 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Nectin2P32507 530 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ecm2Q5FW85 670 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Tfip11Q9ERA6 838 aaKnown RBP10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Apol7aB2RT54 418 aa10.52□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Usp35M0QWN7 1009 aa10.52□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ranbp1P34022 203 aaKnown RBP10.52□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ppfibp1Q8C8U0 969 aaKnown RBP10.52□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ccdc178Q8CDV0 866 aa10.52□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Cabp4Q8VHC5 271 aa10.52□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Nsd2Q8BVE8 1365 aa10.52□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Atad2bE9Q166 1460 aaKnown RBP10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ehmt1Q5DW34 1296 aa10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Krt84Q99M73 603 aa10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ncoa2Q61026 1462 aa10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 L1td1Q587J6 782 aaKnown RBP10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Tsg101Q61187 391 aa10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ppp2r1aQ76MZ3 589 aa10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Mcm3P25206 812 aaKnown RBP10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Kcnh8P59111 1102 aa10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Rassf2Q8BMS9 326 aa10.52□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ms4a1P19437 291 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Map3k9Q3U1V8 1077 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Rimbp2Q80U40 1072 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Nutm1Q8BHP2 1126 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Sel1lQ9Z2G6 790 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Atp6v1aP50516 617 aaKnown RBP10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Specc1Q5SXY1 1067 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Tubb2aQ7TMM9 445 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cplx4Q80WM3 160 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Serpina10Q8R121 448 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Tubb2bQ9CWF2 445 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 E9QMW4 1145 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Lrrfip2Q91WK0 415 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Nap1l5Q9JJF0 156 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Knop1Q9Z2Q2 478 aaKnown RBP10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Gas2l3Q3UWW6 683 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Kiaa1211Q5PR69 1207 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ccdc172Q810N9 267 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ano10Q8BH79 659 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Trerf1Q8BXJ2 1205 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Themis2Q91YX0 663 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Letm1Q9Z2I0 738 aa10.51□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Gm21190A0A0G2JGJ6 266 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Zfp853A0A1D5RM95 733 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 DesP31001 469 aaKnown RBP10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Sept11Q8C1B7 431 aaKnown RBP10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Tbc1d8Q9Z1A9 1134 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Zkscan5Q9Z1D8 819 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Usp25P57080 1055 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ccdc148Q6P5U8 527 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Zfp397Q7TNK4 527 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 ZwintQ9CQU5 252 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Gm28510A0A087WP28 240 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ddx49Q4FZF3 480 aaKnown RBP10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Fnbp4Q6ZQ03 1031 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cacna2d3Q9Z1L5 1091 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cux1P53564 1515 aa10.5□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Rasa1E9PYG6 1038 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Hdhd2Q3UGR5 259 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ift74Q8BKE9 600 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Vps8Q0P5W1 1427 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Irgm2A0A140LIF8 407 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 B4galnt4Q766D5 1034 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Mphosph10Q810V0 681 aaKnown RBP10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Suds3Q8BR65 328 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Spats2Q8K1N4 545 aaKnown RBP10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 RpgrQ9R0X5 1001 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Rab3il1Q8VDV3 383 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Nap1l2P51860 460 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 EsrrbQ61539 433 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Fsd2Q8BZ52 692 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Hsf2bpQ9D4G2 338 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Setdb1O88974 1307 aa10.49□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cbfa2t2O70374 594 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Krt8P11679 490 aaKnown RBP10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Kiaa1328Q6NZK5 612 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 SfpqQ8VIJ6 699 aaKnown RBP10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 ErbinQ80TH2 1402 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Phlpp2Q8BXA7 1320 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Eftud2O08810 971 aaKnown RBP10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 SncbQ91ZZ3 133 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cfap57Q9D180 1249 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Smarca2Q6DIC0 1577 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 TbcaP48428 108 aaKnown RBP10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Sem1P60897 70 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 PsapQ61207 557 aaKnown RBP10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ptpdc1Q6NZK8 747 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Sdccag8Q80UF4 717 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Taok3Q8BYC6 898 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Pms1Q8K119 917 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Mtmr3Q8K296 1196 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Tnnc1P19123 161 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Top1Q04750 767 aaKnown RBP10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Atp2b2Q9R0K7 1198 aa10.48□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Rasal2E9PW37 1286 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Speer4aF8VPX6 267 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Gjb2Q00977 226 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Shq1Q7TMX5 569 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms