RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Zbtb4Q5F293 982 aa12.05□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 PgfP49764 158 aa12.04□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Tmem132eQ6IEE6 982 aa12.04□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Fbxo33Q8VE08 562 aa12.04□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Taf1dQ9D4V4 322 aa12.04□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Cyp2c68K7N6C2 491 aa12.03□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Tgfb2P27090 414 aa12.03□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Foxd1Q61345 456 aa12.03□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Klc3Q91W40 508 aa12.03□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 NogP97466 232 aa12.02□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 SobpQ0P5V2 864 aa12.02□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Eid3Q3V124 375 aa12.02□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Cyp2c67Q569X9 491 aa12.02□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 TrhQ62361 256 aa12.02□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Nphp4P59240 1425 aa12.02□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Gm21680A0A0G2JGR8 267 aa12.01□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Sumf1Q8R0F3 372 aa12.01□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Bicdl1A0JNT9 577 aa12□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Dkk1O54908 272 aa12□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Rbm46P86049 533 aa12□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Fam50bQ9WTJ8 334 aa12□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Kiaa1107Q80TK0 1369 aa12□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Sned1Q70E20 1403 aa11.99□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Megf6Q80V70 1572 aa11.99□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Abca3Q8R420 1704 aa11.98□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 PappaQ8R4K8 1624 aa11.98□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Rgs19Q9CX84 216 aa11.98□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Pde3aQ9Z0X4 1141 aa11.98□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 TkfcQ8VC30 578 aa11.97□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Gm10471E9Q1C7 252 aa11.96□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Ano8Q6PB70 1060 aa11.96□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Speer4bQ9D9F7 267 aa11.96□□□□□ -0.49
Pdlim5-209ENSMUST00000196908 Ahnak2E9PYB0 1738 aaKnown RBP11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Cnga1P29974 684 aa11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 B4galnt4Q766D5 1034 aa11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Fndc3aQ8BX90 1198 aa11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Klhdc4Q921I2 584 aa11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Irx5Q9JKQ4 484 aa11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Msh5Q9QUM7 833 aa11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 FocadA2AKG8 1798 aa11.95□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 ScaperF8VQ70 1398 aaKnown RBP11.94□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Col15a1O35206 1367 aa11.94□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Fam83gQ5SWY7 812 aa11.94□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 ApobrQ8VBT6 942 aa11.94□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Usp19Q3UJD6 1360 aa11.93□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Chrm1P12657 460 aa11.93□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Neurod1Q60867 357 aa11.93□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Stard8Q8K031 1019 aa11.93□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 ElnP54320 860 aa11.92□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Srcin1Q9QWI6 1250 aa11.92□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Nedd4P46935 887 aaKnown RBP11.91□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Pcdhb17Q91VD8 799 aa11.91□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 CoblQ5NBX1 1337 aaKnown RBP11.9□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Cdk12Q14AX6 1484 aaKnown RBP11.9□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 CpzQ8R4V4 654 aa11.9□□□□□ -0.5
Pdlim5-209ENSMUST00000196908 Adgrb1Q3UHD1 1582 aa11.89□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Dusp27Q148W8 1138 aa11.89□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Ccnl1Q52KE7 532 aaKnown RBP11.89□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Micall1Q8BGT6 870 aa11.89□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Spata31d1bE9QA57 1361 aa11.89□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Cfap70D3YVL2 1141 aa11.88□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Hspa5P20029 655 aaKnown RBP11.88□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Aplp2Q06335 707 aa11.88□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Ier5lQ99J55 406 aa11.88□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Map2P20357 1828 aa11.88□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Gm13023A2A8N2 498 aa11.87□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Hoxc9P09633 260 aa11.87□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 DaglaQ6WQJ1 1044 aa11.87□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Larp1Q6ZQ58 1072 aaKnown RBP11.87□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Adnp2Q8CHC8 1165 aaKnown RBP11.87□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Pik3ap1Q9EQ32 811 aa11.87□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Plch1Q4KWH5 1682 aa11.87□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Thap8E9Q695 213 aa11.86□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Smarcc1P97496 1104 aa11.86□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 XpcP51612 930 aa11.85□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 4930572O03RikQ8C5Y0 211 aa11.85□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Lama2Q60675 3118 aaKnown RBP11.84□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Klrk1O54709 232 aa11.84□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Evi5P97366 809 aa11.84□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 1810065E05RikQ5NC41 235 aa11.84□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 Ubr1O70481 1757 aa11.84□□□□□ -0.51
Pdlim5-209ENSMUST00000196908 InsrP15208 1372 aa11.83□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 CemipQ8BI06 1361 aa11.83□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Tlr8P58682 1032 aa11.83□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Ccne1Q61457 408 aa11.83□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Nop58Q6DFW4 536 aaKnown RBP11.82□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Gjd4Q8BSD4 364 aa11.81□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Anks4bQ8K3X6 423 aa11.81□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Chd4Q6PDQ2 1915 aaKnown RBP11.81□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Scaf1Q5U4C3 1256 aaKnown RBP11.8□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Fstl1Q62356 306 aa11.8□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 ThemisQ8BGW0 636 aa11.8□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 IarsQ8BU30 1262 aa11.8□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Ciapin1Q8WTY4 309 aa11.8□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 RtcbQ99LF4 505 aaKnown RBP11.8□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Hdac6Q9Z2V5 1149 aa11.8□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Gm21663A0A0G2JE01 267 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Gm7361D3Z6R1 267 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 5031410I06RikE9Q4E0 267 aa11.79□□□□□ -0.52
Pdlim5-209ENSMUST00000196908 Gm1979E9QAN3 267 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms