RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Tnpo1Q8BFY9 898 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Wdr63B2RY71 923 aa13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Gnai2P08752 355 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Ppp1r42Q8R1Z4 357 aa13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Ptpn23Q6PB44 1692 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Hspa2P17156 633 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 LifrP42703 1092 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 GckrQ91X44 587 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Adgrb1Q3UHD1 1582 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Tm6sf1P58749 370 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Slc4a10Q5DTL9 1118 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Aldh1l2Q8K009 923 aa13.37□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Wwc1Q5SXA9 1104 aa13.36□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 PigbQ9JJQ0 542 aa13.36□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Cnnm1Q0GA42 951 aa13.36□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Slc39a6Q8C145 765 aa13.36□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Cyb5rlB1AS42 316 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Stk11ipQ3TAA7 1072 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Ddx54Q8K4L0 874 aaKnown RBP13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Tet3Q8BG87 1668 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Gm21663A0A0G2JE01 267 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Gm21680A0A0G2JGR8 267 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Gm7361D3Z6R1 267 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 5031410I06RikE9Q4E0 267 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Gm1979E9QAN3 267 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Gm5862K7N5V5 267 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Gm10220K7N660 267 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Tlr7P58681 1050 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Tbc1d9Q3UYK3 1264 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Cetn4Q8K4K1 168 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Phkg2Q9DB30 406 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Arfgef2A2A5R2 1792 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Tbc1d32Q3URV1 1296 aa13.35□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Nid2O88322 1403 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Atg4a-psA0A0G2JFS9 396 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 CoilQ5SU73 570 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Zpr1Q62384 459 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Asic4Q7TNS7 539 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Atg4aQ8C9S8 396 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Nup153E9Q3G8 1462 aaKnown RBP13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Ltbp4Q8K4G1 1666 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Col1a2Q01149 1372 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Prkab2Q6PAM0 271 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Phf23Q8BSN5 401 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Bcl11bQ99PV8 884 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Igfbp6P47880 238 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Map3k2Q61083 619 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Tfip11Q9ERA6 838 aaKnown RBP13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Bcar3Q9QZK2 820 aa13.34□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Simc1E9Q6E9 1354 aa13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Unc13bQ9Z1N9 1602 aa13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Ppp1r9bQ6R891 817 aaKnown RBP13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Pnpla7A2AJ88 1352 aa13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Jarid2Q62315 1234 aa13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Nphp1Q9QY53 687 aa13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Trpm3Q5F4S9 1721 aa13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Col18a1P39061 1774 aa13.33□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Rabep1O35551 862 aa13.32□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 DaxxO35613 739 aa13.32□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 SympkQ80X82 1284 aa13.32□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Q9D2X8 372 aa13.32□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Cyp46a1Q9WVK8 500 aa13.32□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Robo1O89026 1612 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Cnksr1A2A9K7 700 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Ttll7A4Q9F0 912 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Clcn1Q64347 994 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Slc5a1Q8C3K6 665 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Sptbn5F6UCX4 1208 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 HdgfP51859 237 aaKnown RBP13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 PsapQ61207 557 aaKnown RBP13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Cgnl1Q6AW69 1298 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 4930572O03RikQ8C5Y0 211 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Echdc1Q9D9V3 322 aa13.31□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Hmox1P14901 289 aa13.3□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Scaf1Q5U4C3 1256 aaKnown RBP13.3□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Abcc12Q80WJ6 1366 aa13.3□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Brwd3A2AHJ4 1799 aa13.29□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Kif2cQ922S8 721 aa13.29□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Gcc1Q9D4H2 778 aa13.29□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Rfx1P48377 963 aa13.29□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Pa2g4P50580 394 aaKnown RBP13.29□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Bend3Q6PAL0 825 aa13.29□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Aldh8a1Q8BH00 487 aa13.29□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Prune1Q8BIW1 454 aa13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Adcy9P51830 1353 aa13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Atp8b2P98199 1209 aa13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Irf9Q61179 399 aa13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Pdia6Q922R8 440 aaKnown RBP13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Bicc1Q99MQ1 977 aaKnown RBP13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 TefQ9JLC6 301 aa13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Mmp8O70138 465 aa13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Taf7Q9R1C0 341 aa13.28□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Tgfb1i1Q62219 461 aa13.27□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Gimap5Q8BWF2 308 aa13.27□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Cadps2Q8BYR5 1297 aa13.27□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Eif3bQ8JZQ9 803 aaKnown RBP13.27□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Efcab2Q9CQ46 164 aa13.27□□□□□ -0.28
Pcdh20-202ENSMUST00000192557 Cdhr2E9Q7P9 1308 aa13.27□□□□□ -0.29
Pcdh20-202ENSMUST00000192557 Ier5O89113 308 aa13.27□□□□□ -0.29
Pcdh20-202ENSMUST00000192557 Zbtb45Q52KG4 520 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 115.2 ms