RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 NppbP40753 121 aa17.97■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Flad1Q8R123 492 aa17.97■□□□□ 0.47
Ercc1-203ENSMUST00000160369 VirmaA2AIV2 1811 aaKnown RBP17.97■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Neurod2Q62414 383 aa17.96■□□□□ 0.47
Ercc1-203ENSMUST00000160369 U2surpQ6NV83 1029 aaKnown RBP17.96■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Foxp4Q9DBY0 795 aaKnown RBP17.96■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Msh6P54276 1358 aaKnown RBP17.95■□□□□ 0.46
Ercc1-203ENSMUST00000160369 MeiocA2AG06 965 aa17.95■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Kif23E9Q5G3 953 aa17.95■□□□□ 0.46
Ercc1-203ENSMUST00000160369 NudcO35685 332 aaKnown RBP17.95■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Fam198bQ3UPI1 517 aa17.95■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Akt1s1Q9D1F4 257 aa17.95■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Irx6Q9ER75 438 aa17.95■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Col1a2Q01149 1372 aa17.94■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Eif4a1P60843 406 aaKnown RBP17.94■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Iqsec3Q3TES0 1195 aa17.94■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Rad21Q61550 635 aaKnown RBP17.94■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Miga2Q8BK03 593 aa17.94■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Cnnm1Q0GA42 951 aa17.93■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Cypt1Q8CH20 168 aa17.93■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Cdc37l1Q9CZP7 335 aa17.93■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Taf7Q9R1C0 341 aa17.93■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Gm13023A2A8N2 498 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Ccdc85cE9Q6B2 420 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Jdp2P97875 163 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Q3TQI7 289 aaKnown RBP17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Lrrc43Q3V0L5 667 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Usp16Q99LG0 825 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Atxn3Q9CVD2 355 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 PigbQ9JJQ0 542 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Kndc1Q0KK55 1742 aa17.92■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Klhdc4Q921I2 584 aa17.91■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Zfyve9A2A8R0 1397 aa17.91■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Nav1Q8CH77 1875 aa17.9■□□□□ 0.46
Ercc1-203ENSMUST00000160369 1700019A02RikA0A087WPV9 146 aa17.9■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Prr29B1ARI9 187 aa17.9■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Pibf1E9Q6K3 756 aa17.9■□□□□ 0.46
Ercc1-203ENSMUST00000160369 PsapQ61207 557 aaKnown RBP17.9■□□□□ 0.46
Ercc1-203ENSMUST00000160369 GckrQ91X44 587 aa17.9■□□□□ 0.46
Ercc1-203ENSMUST00000160369 Rbm25B2RY56 838 aaKnown RBP17.89■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Ttc21aQ8C0S4 1314 aa17.89■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Ankrd50F7BE84 1390 aa17.89■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Tnnt1O88346 262 aa17.88■□□□□ 0.45
Ercc1-203ENSMUST00000160369 CastP51125 788 aa17.88■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Gm12185Q5NCB2 835 aa17.88■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Ccdc30Q8BVF4 654 aa17.88■□□□□ 0.45
Ercc1-203ENSMUST00000160369 RtcbQ99LF4 505 aaKnown RBP17.88■□□□□ 0.45
Ercc1-203ENSMUST00000160369 MetP16056 1379 aa17.88■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Ildr2B5TVM2 661 aa17.87■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Chpf2Q3UU43 768 aa17.87■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Morc2aQ69ZX6 1030 aa17.87■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Senp3Q9EP97 568 aaKnown RBP17.87■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Spata31d1bE9QA57 1361 aa17.87■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Atf5O70191 283 aa17.86■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Ksr2Q3UVC0 959 aa17.86■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Gpr150Q8BL07 427 aa17.86■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Tmem119Q8R138 280 aa17.86■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Nip7Q9CXK8 180 aaKnown RBP17.86■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Trpc5Q9QX29 975 aa17.86■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Syde2E9PUP1 1314 aa17.85■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Fkbp4P30416 458 aa17.85■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Erbb4Q61527 1308 aa17.85■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Ofd1Q80Z25 1017 aa17.85■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Zfp444Q3TDV8 331 aaKnown RBP17.84■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Prkab2Q6PAM0 271 aa17.84■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Cyp2d12Q8BVD2 504 aa17.84■□□□□ 0.45
Ercc1-203ENSMUST00000160369 IncenpQ9WU62 880 aa17.84■□□□□ 0.45
Ercc1-203ENSMUST00000160369 Bcl2l13P59017 434 aa17.83■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Pdia6Q922R8 440 aaKnown RBP17.83■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Gigyf1Q99MR1 1044 aaKnown RBP17.83■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Rapgef4Q9EQZ6 1011 aa17.83■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Ccar1Q8CH18 1146 aaKnown RBP17.82■□□□□ 0.44
Ercc1-203ENSMUST00000160369 HmcesQ8R1M0 353 aaKnown RBP17.82■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Zbtb1Q91VL9 713 aa17.82■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Clcn1Q64347 994 aa17.81■□□□□ 0.44
Ercc1-203ENSMUST00000160369 SympkQ80X82 1284 aa17.81■□□□□ 0.44
Ercc1-203ENSMUST00000160369 C4bP01029 1738 aa17.81■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Plekhh1Q80TI1 1356 aa17.8■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Gnl3lQ6PGG6 577 aaKnown RBP17.8■□□□□ 0.44
Ercc1-203ENSMUST00000160369 ErfeQ6PGN1 340 aa17.8■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Dlg5E9Q9R9 1921 aa17.8■□□□□ 0.44
Ercc1-203ENSMUST00000160369 AtrnQ9WU60 1428 aa17.8■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Amhr2Q8K592 568 aa17.79■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Sumf1Q8R0F3 372 aa17.79■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Chrna2Q91X60 512 aa17.79■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Nop58Q6DFW4 536 aaKnown RBP17.78■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Cnksr1A2A9K7 700 aa17.77■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Rbm26Q6NZN0 1012 aaKnown RBP17.77■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Msl1Q6PDM1 616 aa17.77■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Slc39a6Q8C145 765 aa17.77■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Trim52Q8CDV4 233 aa17.77■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Nsfl1cQ9CZ44 370 aaKnown RBP17.77■□□□□ 0.44
Ercc1-203ENSMUST00000160369 Kank1E9Q238 1360 aa17.77■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Gm6268A2A3U9 297 aa17.76■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Prr5lA2AVJ5 370 aa17.76■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Atp1b3P97370 278 aa17.76■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Dpf1Q9QX66 387 aa17.76■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Ubr3Q5U430 1889 aa17.75■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Ccdc171E9Q1U1 1324 aa17.75■□□□□ 0.43
Ercc1-203ENSMUST00000160369 Vamp4O70480 141 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms