RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Ddx10Q80Y44 875 aaKnown RBP12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Tpd52l2Q9CYZ2 220 aaKnown RBP12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Babam1Q3UI43 333 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Fchsd2Q3USJ8 740 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ddx58Q6Q899 926 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Taf12Q8VE65 161 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Jakmip1Q8BVL9 626 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Nop14Q8R3N1 860 aaKnown RBP12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Brms1Q99N20 246 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Gm10563F6WIE4 79 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Pafah1b1P63005 410 aaKnown RBP12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 ScribQ80U72 1612 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Nf2P46662 596 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ano8Q6PB70 1060 aa12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Rbm19Q8R3C6 952 aaKnown RBP12.11□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Neurog2P70447 263 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ifit1bl2Q3U687 466 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ppp1r21Q3TDD9 780 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Farp2Q91VS8 1065 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ctnnbl1Q9CWL8 563 aaKnown RBP12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Cdc37l1Q9CZP7 335 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Traf3ip1Q149C2 625 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Terf1P70371 421 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ncapg2Q6DFV1 1138 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 GpkowQ56A08 488 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ccdc181Q80ZU5 509 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Cyp7a1Q64505 503 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Nop53Q8BK35 484 aaKnown RBP12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Cep55Q8BT07 462 aa12.1□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Mx2Q9WVP9 655 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Dact3Q0PHV7 610 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Tspyl3Q3UYP3 334 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Speer3W4VSP1 261 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Mybbp1aQ7TPV4 1344 aaKnown RBP12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Gm7298A0A0N4SVU1 1476 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Izumo3A6PWV3 263 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Vps36Q91XD6 386 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Duox2A2AQ99 1517 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 RarsQ9D0I9 660 aaKnown RBP12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Hook2Q7TMK6 716 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Gigyf1Q99MR1 1044 aaKnown RBP12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 PalmQ9Z0P4 383 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Kif21aQ9QXL2 1672 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Shtn1Q8K2Q9 631 aa12.09□□□□□ -0.47
Scn9a-201ENSMUST00000100063 TmpoQ61033 693 aaKnown RBP12.08□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Trim11Q99PQ2 467 aa12.08□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Myom3A2ABU4 1439 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 ParvgQ9ERD8 331 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Gm42641I6L9G2 585 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 AtripQ8BMG1 785 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Rpgrip1lQ8CG73 1264 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Ppp6r1Q7TSI3 856 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Usp37Q8C0R0 979 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Top1mtQ8R4U6 593 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Lman1Q9D0F3 517 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Dydc1Q9D9T0 175 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Gm7347D3YYI9 267 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Speer4aF8VPX6 267 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Speer4dL7N216 212 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Txndc16Q7TN22 820 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Nup88Q8CEC0 753 aaKnown RBP12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Kdm3aQ6PCM1 1323 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 CalrP14211 416 aaKnown RBP12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Tmco5aQ9D9D5 303 aa12.08□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Cct4P80315 539 aaKnown RBP12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 TchhA0A0B4J1F9 1599 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Cfap58B2RW38 873 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Rad23bP54728 416 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Sept7O55131 436 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 A2mQ6GQT1 1474 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Ppp1r9bQ6R891 817 aaKnown RBP12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Apaf1O88879 1249 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Tbc1d2bQ3U0J8 965 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 IbspQ61711 324 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Q9D5Q8 446 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Kank1E9Q238 1360 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Sptbn5F6UCX4 1208 aa12.07□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Kifc2O08672 792 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Slc52a2Q9D8F3 450 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Ccdc129Q14B48 1034 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 PogzQ8BZH4 1409 aaKnown RBP12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Zc3h12cQ5DTV4 884 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Gimap8Q75N62 688 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Sept11Q8C1B7 431 aaKnown RBP12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Slc26a8Q8R0C3 999 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Znf394Q9Z1D9 521 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Ccdc112A0AUP1 442 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Prr29B1ARI9 187 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Calml4Q91WQ9 153 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Gps2Q921N8 327 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Sos1Q62245 1319 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Rnf34Q99KR6 376 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Gnl2Q99LH1 728 aaKnown RBP12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 TimelessQ9R1X4 1197 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Dzip1lQ499E4 774 aa12.06□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Zmynd15Q8C0R7 736 aa12.05□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Usp5P56399 858 aaKnown RBP12.05□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Zkscan1Q8BGS3 561 aaKnown RBP12.05□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Ppp2r1aQ76MZ3 589 aa12.05□□□□□ -0.48
Scn9a-201ENSMUST00000100063 Vps8Q0P5W1 1427 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms