RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Ddx17Q501J6 650 aaKnown RBP12.68□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Rapgef4Q9EQZ6 1011 aa12.68□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Txnrd1Q9JMH6 613 aa12.68□□□□□ -0.38
Ldb3-205ENSMUST00000090040 PnnO35691 725 aaKnown RBP12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Uhrf1bp1B2KF50 1429 aa12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Map3k2Q61083 619 aa12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 TnrQ8BYI9 1358 aa12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Phlpp2Q8BXA7 1320 aa12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 IghaA0A0A6YXW6 389 aa12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Gm973E9Q295 1059 aa12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Cct4P80315 539 aaKnown RBP12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Phkg2Q9DB30 406 aa12.67□□□□□ -0.38
Ldb3-205ENSMUST00000090040 RictorQ6QI06 1708 aa12.66□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Kif13aQ9EQW7 1749 aa12.66□□□□□ -0.38
Ldb3-205ENSMUST00000090040 BcanQ61361 883 aa12.66□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Efcab2Q9CQ46 164 aa12.66□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Rsph3aQ3UFY4 516 aa12.66□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Iqsec2Q5DU25 1478 aa12.66□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Vsig10D3YX43 558 aa12.65□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Ginm1Q91WR6 327 aa12.65□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Abcc10Q8R4P9 1501 aa12.65□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Nlrp3Q8R4B8 1033 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Rnf20Q5DTM8 973 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Ptpdc1Q6NZK8 747 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Casc1Q6TDU8 730 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Lmtk3Q5XJV6 1424 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Snap23O09044 210 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 LifrP42703 1092 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Trim27Q62158 513 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Filip1lQ6P6L0 1131 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 1700010I14RikQ7TPG0 532 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Rhot2Q8JZN7 620 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Trim34aQ99PP6 485 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Atp7bQ64446 1462 aa12.64□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Emilin2Q8K482 1074 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Iffo2Q8R2V2 512 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Pdzd9Q9D9M4 266 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Igsf1Q7TQA1 1317 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Ubap1lG3UW59 384 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Ankib1Q6ZPS6 1085 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Fam13aQ8BGI4 693 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 KinQ8K339 391 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Klc3Q91W40 508 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Nwd1A6H603 1563 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Usp32F8VPZ3 1604 aa12.63□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Morc2aQ69ZX6 1030 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Abcc12Q80WJ6 1366 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Trim34bJ3QNR8 485 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Casq1O09165 405 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Ccnl1Q52KE7 532 aaKnown RBP12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Ttc19Q8CC21 365 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Plcd4Q8K3R3 807 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Foxp4Q9DBY0 795 aaKnown RBP12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Cnksr1A2A9K7 700 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Zap70P43404 618 aa12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Smarca5Q91ZW3 1051 aaKnown RBP12.62□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Stk3Q9JI10 497 aa12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Chl1P70232 1209 aa12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Soga3Q6NZL0 945 aa12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Hmgb2P30681 210 aaKnown RBP12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Atp8b2P98199 1209 aa12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 St18Q80TY4 1045 aa12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Calcoco2A2A6M5 331 aa12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Eif4a1P60843 406 aaKnown RBP12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Aldh8a1Q8BH00 487 aa12.61□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Abca14E9Q8F8 1683 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Qtrt2B8ZXI1 415 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Gnat3Q3V3I2 354 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 GpkowQ56A08 488 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Nid2O88322 1403 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Wdr63B2RY71 923 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Eva1cP58659 440 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Cul9Q80TT8 1865 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Tnpo1Q8BFY9 898 aaKnown RBP12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Tmem87bQ8BKU8 555 aa12.6□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Arhgef1Q61210 920 aaKnown RBP12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Lrrc59Q922Q8 307 aaKnown RBP12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Znf541Q0GGX2 1363 aa12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Gsdma2Q32M21 443 aa12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 SympkQ80X82 1284 aa12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Myd88P22366 296 aa12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Itsn1Q9Z0R4 1714 aa12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Brd1E9PZ26 1189 aaKnown RBP12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Brinp3Q499E0 766 aa12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Mapk8ip1Q9WVI9 707 aa12.59□□□□□ -0.39
Ldb3-205ENSMUST00000090040 Prr29B1ARI9 187 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Rfx1P48377 963 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Atg3Q9CPX6 314 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Cwc25Q9DBF7 416 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Atf5O70191 283 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Grm8P47743 908 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Rbm27Q5SFM8 1060 aaKnown RBP12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Asic4Q7TNS7 539 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Anapc15-psA0A140T8L6 141 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Hap1O35668 628 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Aifm3Q3TY86 605 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Pm20d1Q8C165 503 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Cchcr1Q8K2I2 770 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 Stk36Q69ZM6 1316 aa12.58□□□□□ -0.4
Ldb3-205ENSMUST00000090040 AU019823E9PUQ3 292 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms