RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Zscan25B2RX31 543 aa14.05□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Pcmtd1P59913 357 aa14.05□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Map3k13Q1HKZ5 959 aa14.05□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Gzf1Q4VBD9 706 aa14.05□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Nlgn1Q99K10 843 aa14.05□□□□□ -0.16
Col9a1-202ENSMUST00000088349 PtmsQ9D0J8 101 aaKnown RBP14.05□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Usp32F8VPZ3 1604 aa14.05□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Chd4Q6PDQ2 1915 aaKnown RBP14.04□□□□□ -0.16
Col9a1-202ENSMUST00000088349 St18Q80TY4 1045 aa14.04□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Vwa3bJ9JI28 736 aa14.04□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Amotl2Q8K371 772 aa14.04□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Chd1lQ9CXF7 900 aa14.04□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Mum1Q6DID5 682 aa14.04□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Stk3Q9JI10 497 aa14.04□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Gm45015A0A140LII9 184 aa14.03□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Gm18336A0A140LIU8 765 aa14.03□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Ythdc1E9Q5K9 736 aaKnown RBP14.03□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Irf5P56477 497 aa14.03□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Nol11Q8BJW5 723 aaKnown RBP14.03□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Babam1Q3UI43 333 aa14.03□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Mknk2Q8CDB0 459 aa14.03□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Olfml1Q8BSH2 233 aa14.02□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Naa30Q8CES0 364 aa14.02□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Fkbp4P30416 458 aa14.02□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Chpf2Q3UU43 768 aa14.02□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Itsn1Q9Z0R4 1714 aa14.02□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Plekhg1F6S200 1446 aa14.02□□□□□ -0.17
Col9a1-202ENSMUST00000088349 LlphQ9D945 130 aaKnown RBP14.01□□□□□ -0.17
Col9a1-202ENSMUST00000088349 FancaQ9JL70 1439 aa14.01□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Casc1Q6TDU8 730 aa14.01□□□□□ -0.17
Col9a1-202ENSMUST00000088349 AnlnQ8K298 1121 aaKnown RBP14.01□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Tpx2A2APB8 745 aaKnown RBP14□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Slc4a10Q5DTL9 1118 aa14□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Tex2Q6ZPJ0 1128 aaKnown RBP14□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Slx4ipQ9D7Y9 413 aa14□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Zbtb45Q52KG4 520 aa14□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Jarid2Q62315 1234 aa14□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Phf23Q8BSN5 401 aa14□□□□□ -0.17
Col9a1-202ENSMUST00000088349 E4f1Q8CCE9 783 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Pof1bQ8K4L4 587 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 4930407I10RikD3Z5T8 1512 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Mmp8O70138 465 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Gse1Q3U3C9 1213 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Frmpd2A0A140LI67 1392 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Exoc6bA6H5Z3 810 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 F2rP30558 430 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Atp6v1dP57746 247 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 EappQ5BU09 281 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Cyp2d12Q8BVD2 504 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Pnma3Q8JZW8 466 aa13.99□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Mlh1Q9JK91 760 aa13.98□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Pmfbp1Q9WVQ0 1022 aa13.98□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Hoxb7P09024 217 aa13.98□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Pdzrn3Q69ZS0 1063 aa13.98□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Pdcl2Q78Y63 240 aa13.98□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Kdm4aQ8BW72 1064 aa13.98□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Parp14Q2EMV9 1817 aa13.98□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Samm50Q8BGH2 469 aa13.97□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Zbtb22Q9Z0G7 638 aa13.97□□□□□ -0.17
Col9a1-202ENSMUST00000088349 KinQ8K339 391 aa13.97□□□□□ -0.17
Col9a1-202ENSMUST00000088349 ScaperF8VQ70 1398 aaKnown RBP13.97□□□□□ -0.17
Col9a1-202ENSMUST00000088349 PtpruB1AUH1 1446 aa13.97□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Mdc1Q5PSV9 1707 aa13.97□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Atp8b2P98199 1209 aa13.96□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Bms1Q6PGF5 1284 aaKnown RBP13.96□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Pip4k2bQ80XI4 416 aa13.96□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Nwd1A6H603 1563 aa13.96□□□□□ -0.17
Col9a1-202ENSMUST00000088349 Hoxc9P09633 260 aa13.96□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Bach1P97302 739 aa13.96□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Mindy4Q3UQI9 744 aa13.96□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Spef2Q8C9J3 1734 aa13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Brpf1B2RRD7 1212 aa13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Smarce1O54941 411 aaKnown RBP13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Arhgef1Q61210 920 aaKnown RBP13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Ccdc155Q80VJ8 648 aa13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Glipr1l2Q9CQ35 332 aa13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Mcm3P25206 812 aaKnown RBP13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Ddx17Q501J6 650 aaKnown RBP13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Utp3Q9JI13 469 aaKnown RBP13.95□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Elmsan1E9Q2I4 1089 aaKnown RBP13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Zap70P43404 618 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 TatQ8QZR1 454 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Pik3c2bE9QAN8 1632 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Mcmdc2E9Q956 681 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Cfdp1O88271 295 aaKnown RBP13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Gjb2Q00977 226 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Usp48Q3V0C5 1052 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Lmod3E9QA62 571 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Unc5clQ6R653 518 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 HypkQ9CR41 129 aa13.94□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Dip2bQ3UH60 1574 aa13.93□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Kif20bQ80WE4 1774 aaKnown RBP13.93□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Tlr7P58681 1050 aa13.93□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Nol8Q3UHX0 1147 aaKnown RBP13.93□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Ints3Q7TPD0 1041 aaKnown RBP13.93□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Mad1l1Q9WTX8 717 aaKnown RBP13.93□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Fyb1O35601 819 aa13.92□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Gpatch11Q3UFS4 262 aa13.92□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Utp18Q5SSI6 552 aaKnown RBP13.92□□□□□ -0.18
Col9a1-202ENSMUST00000088349 Gemin5Q8BX17 1502 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms